Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29818 LG8 30770592 30771462 receptor-like protein kinase FERONIA
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 30770666 synonymous_variant p.Ser25Ser
C/T 30770667 synonymous_variant p.Leu26Leu
G/A 30770698 missense_variant p.Ser36Asn
T/C 30770711 synonymous_variant p.Pro40Pro
G/A 30770733 missense_variant p.Ala48Thr
T/G 30770765 stop_gained p.Tyr58*
C/T 30770775 stop_gained p.Gln62*
C/G 30770782 missense_variant p.Ser64Cys
T/A 30770795 synonymous_variant p.Leu68Leu
A/T 30770828 missense_variant p.Lys79Asn
G/A 30770867 synonymous_variant p.Ala92Ala
T/A 30770951 missense_variant p.Asp120Glu
T/C 30770960 synonymous_variant p.Asn123Asn
A/G 30770970 missense_variant p.Met127Val
T/A 30771195 missense_variant p.Phe158Ile
T/C 30771227 splice_donor_variant&intron_variant
A/C 30771236 intron_variant
T/C 30771238 intron_variant
G/A 30771257 intron_variant
A/C 30771268 intron_variant
T/C 30771276 intron_variant
C/T 30771313 splice_region_variant&intron_variant
T/C 30771316 splice_acceptor_variant&intron_variant
G/A 30771318 stop_gained&splice_region_variant p.Trp168*
G/A 30771322 missense_variant p.Asp170Asn
T/G 30771330 synonymous_variant p.Gly172Gly
C/T 30771339 synonymous_variant p.Gly175Gly
G/T 30771355 stop_gained p.Glu181*
C/A 30771360 synonymous_variant p.Gly182Gly
A/G 30771364 missense_variant p.Thr184Ala
C/T 30771365 missense_variant p.Thr184Ile
A/G 30771370 missense_variant p.Lys186Glu
T/C,G 30771387 synonymous_variant p.Val191Val
G/A,* 30771398 missense_variant p.Gly195Glu
G/A,* 30771412 missense_variant p.Asp200Asn
T/C,* 30771416 missense_variant p.Val201Ala
A/G 30771419 missense_variant p.Asp202Gly
T/C,* 30771423 synonymous_variant p.Val203Val
C/T,* 30771425 missense_variant p.Ala204Val
G/A 30771439 missense_variant p.Val209Ile
A/T 30771446 missense_variant p.Asp211Val
C/T 30771447 synonymous_variant p.Asp211Asp
T/C 30771460 stop_lost&splice_region_variant p.Ter216Glnext*?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29818.1
MQAGSKTRLLTQLKSSKSATQQLVSLDKTQTLLLKSLRFPLAQTRKVASLRKAEKPYYEQLQVSFCSLLFLFSSSSNTKRISPLKVVPAKKAELLAGWLIVTANQPLPLLLHSKIRAATDNFNEQLMVGVGGFGNVYKGYVDEGSSILLISGEKWGLISCSCVRVCGVWSDEGGLGVDDEVEGVTGKGEADVGVAGEGEADVDVAEEGEVDDGVAM*


CDS Sequence:
>Vu_29818.1
ATGCAAGCTGGATCAAAGACGCGATTATTAACGCAATTGAAGTCTTCAAAATCAGCAACTCAACAGTTAGTCTCACTGGACAAAACCCAAACCCTCCTCCTCAAAAGCCTAAGGTTCCCTTTAGCTCAAACAAGAAAAGTAGCGTCTTTACGAAAAGCCGAGAAGCCATACTATGAGCAGTTGCAGGTGTCCTTTTGCTCTCTTCTATTCTTGTTTTCTTCCTCATCAAATACAAAAAGAATATCACCCTTGAAAGTGGTTCCAGCAAAAAAGGCGGAACTTCTCGCGGGGTGGCTCATCGTCACTGCCAACCAACCTCTGCCGCTACTTCTCCATAGCAAAATCAGAGCCGCCACCGATAACTTCAATGAACAATTGATGGTTGGAGTGGGAGGCTTCGGGAACGTGTACAAAGGCTACGTAGATGAGGGTTCTTCCATCTTGCTGATCAGTGGCGAGAAGTGGGGTTTGATTTCCTGTTCTTGCGTTCGTGTTTGCGGAGTTTGGAGCGACGAGGGTGGTCTTGGCGTGGACGACGAGGTCGAAGGCGTCACCGGGAAGGGAGAGGCGGATGTTGGCGTCGCTGGGGAGGGAGAGGCGGATGTCGACGTTGCCGAGGAGGGAGAGGTTGATGACGGTGTCGCGATGTAG


Promoter Sequence:
>Vu_29818::LG8:30768592-30770592(+)
AACACGACTAGAAGACCTAACTTTTGTGTGTAAAAGATGAACCTACAGTCCATTGCAAGCCACTCCATCCAATAGGTAAGCCCAACAGAATACCATCAGACTAAGGCCTGTTTGGATGAATTTCTCCATAGAAGAAAAATTAAAATTGGCTTCTCTACAAGCTAAAATTAGTTTATGCACATGGTAATTCGTAGAAACTTTCTCATATAGTTTCTCTAAAATTTATTCTTAACTTATGCACAATCTAATTTTAATTTAAGAAAAAGTCACTTTGATTTTTTCTTTCTTATATTTTTCTTTAGAATTGTTTATGGTGAAGTTCATCCAAACAAACACAAATCACTAGAAATTCTTGGGCGTAAATACAAGTGACACATACATTGTGAAGGGACTATAAAACTCCTTAATTGTTATTTTTGCATATGATTAAACAATGCACCCAATATACATTGAATACCAAGGGTCTTATTAGGAATAACGGTAAGAAATAAACTATTTCAATAATCAATAACATATATAATAAGTTATAACTATAACTGATTACAGTCACACTATAGAGTATTGACTGTGGCTGAAGAGTAATCCCTAGTAAAACAATTCAGTAAACAAAAAAGATAATCTAAGCATTACCTAAACAAAGTTCAATTCAATCGTACTGTGACGTCTATACTCGAAGTTTGAAATAACAGAAAAGAACACAAAAAGAGAAGAGGAAAAGAAAATGGTACTTGAACTGATTAGAAAGCGTCCACATATAGGGATTGAAGTATGTGAGAACAGAGAAGGCAGCGGATCCAATCCAAATGTTGACAAACCGATCCGGGTCCGCATGGGGCACGCCCGGGTCACCGCGATAAGCGTTTCCGAAGTACTTTTCCATTCTTCTTCTCTCCTTTCTCTGCTTTGCTTCTCTCTGAGTTTTCAGAGCTCCACTCTTATCCCCTTCTCTCAATGTAAACCACTCTTATTCATACATAAATTTGCTCACGACGTCGTTTCATGTTTTTGCTGTGATATTAGTGCCACAATTTCTTTCTTGGGCTTCTGTTTTGAAAACGAATGTTTCATCTTACACCTCTAATGTCTTCTTGGATTTTTTAAAATTCCATTTTCAACCTTTTAACCTTTCATCTTCCGTTCAACTTTTTCAAAAATTTCACTTTTAATTTTAAAAAATACGTTTTTATATTTTTCTTTTTCTTATTAAAAACACTTTACACCACCTTTATAATAATTAAATTTAAAATTCAAATATTATTTAATATAATTTTATATTTAAATAATTATTAAAATATCATTTATATTATAATATTAGTTATATTAAAAATATAAAAATAAAATAATAACAATAAAAATAAAATTATATTAAATAATATATTTAAATATATTAAATTATATTAAAATTCTAAAATAAATTAAATAATTATTAAACTTAAATAAAAGATAAAGTTTAAAAAACAATTATTTATTTAAAATCAAATAAAATTATATTAAATAAAATATTCAAATACATTTAAATTATATTAAAATATTGGCTTAATACCCTCTTTCGTCCCCACTTTCGTTGGATAATGTCAATTCAGTCCTCATTTTTTAAAGTGTTTGGAATATGTCCATAGTTAGTAAAATTTGCGTCTAATTTGTCCCTTCCGTTAAGTATAATCAAACGAAGTTAGTGTGTTGATGATCTGGCACTAGATATTGATGACGTGTCAATATATTATTTTGTGGGTGCTGACGTGTTACTTTCTTTCAGGGTCTTCTTCTTTTTGTTTGTCTTCTTCTTCTTTAATAATTCATTCCCCCATTTTCCCACCTTACACAACCGAGCTTTATGTATGTATAATCAACCTCAAAAACATCAAATTCATGCACAACAGAGGTTTCATTCTCATTCTCATCTTAAATCAAAAGATCTTATATCATCAAATCATCAACAGCTTCCAAAAAGAAGAAAGAATCAATTAATCTTATATCATCAAATCATCAACACCTCGCCA


Gene Sequence:
>Vu_29818(+)
ATGCAAGCTGGATCAAAGACGCGATTATTAACGCAATTGAAGTCTTCAAAATCAGCAACTCAACAGTTAGTCTCACTGGACAAAACCCAAACCCTCCTCCTCAAAAGCCTAAGGTTCCCTTTAGCTCAAACAAGAAAAGTAGCGTCTTTACGAAAAGCCGAGAAGCCATACTATGAGCAGTTGCAGGTGTCCTTTTGCTCTCTTCTATTCTTGTTTTCTTCCTCATCAAATACAAAAAGAATATCACCCTTGAAAGTGGTTCCAGCAAAAAAGGCGGAACTTCTCGCGGGGTGGCTCATCGTCACTGCCAACCAACCTCTGCCGCTACTTCTCCATAGCAAAATCAGAGCCGCCACCGATAACTTCAATGAACAATTGATGGTTGGAGTGGGAGGCTTCGGGAACGTGTACAAAGGCTACGTAGATGAGGGTTCAGTACATGTTGCAATTCATTAGGGGTTCTCTTTTGGTATTTGATTTTTTAGAGTTGGGATGCAGAGTTTCGTTTCGCTCTGTTTTTGGGAAAATTCTTGATTTTTCTGATTTCGATTTGGGTTGAGGTTCTTCCATCTTGCTGATCAGTGGCGAGAAGTGGGGTTTGATTTCCTGTTCTTGCGTTCGTGTTTGCGGAGTTGTAGATTGTTATTTGAAGTGTTTCTATGCACGTTTTAGGGTTATTTGTTTTGCGATGTCTGATCTGTAGTGACGATGCTGGTTGGACCAGTGGAGCGACGAGGGTGGTCTTGGCGTGGACGACGAGGTCGAAGGCGTCACCGGGAAGGGAGAGGCGGATGTTGGCGTCGCTGGGGAGGGAGAGGCGGATGTCGACGTTGCCGAGGAGGGAGAGGTTGATGACGGTGTCGCGATGTAG