Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_29779	LG8	30369179	30369646	PREDICTED: ethylene-responsive transcription factor ERF098-like	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
T/A	30369355	synonymous_variant	p.Ala59Ala
T/G	30369363	missense_variant	p.Phe62Cys
T/A	30369367	missense_variant	p.His63Gln
T/G	30369457	synonymous_variant	p.Leu93Leu
G/C	30369549	missense_variant	p.Ser124Thr
G/C	30369605	missense_variant	p.Glu143Gln

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_29779.1

MEGGRSSVSNGNVEARYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFETAEQAARAYDAAAFHFRGHRAILNFPNEYQSSNPNSSLPMPLTTLPPASSSSSSSSSSYSSYSIDNLAGPVFSGESMQGDDTFELEYLDNKLLEELLQMQDNRHLFK*

CDS Sequence:
>Vu_29779.1

ATGGAGGGAGGAAGATCTTCGGTTTCTAATGGAAATGTTGAGGCTCGGTATAGAGGGATTCGGAGAAGGCCATGGGGAAAGTTTGCTGCAGAGATTCGTGACCCTACAAGGAAAGGGACTCGGATATGGCTTGGAACCTTCGAAACTGCAGAACAAGCTGCACGAGCTTATGATGCTGCTGCTTTTCATTTTCGTGGCCACAGAGCCATTCTCAACTTCCCAAATGAGTATCAGTCTTCTAATCCAAACTCTTCTTTGCCTATGCCTTTAACAACACTTCCACCTGCTTCCTCTTCCTCTTCCTCTTCTTCTTCTTCCTATTCTTCTTACTCTATTGATAACCTTGCGGGACCTGTTTTTTCTGGAGAAAGTATGCAAGGTGATGATACTTTTGAGTTGGAGTACTTGGACAATAAGTTGCTTGAAGAACTCCTTCAGATGCAAGATAACAGACATCTCTTCAAGTGA

Promoter Sequence:
>Vu_29779::LG8:30367179-30369179(+)

AAACTTTAAATGGGATGAAAGGCAACGAGTTGCAGAAGAGTAGCTTTTCTGAAGCATGGATAGAAGAAAAATATAATAAAATATTGATTTTGCCCTGCACAATTAACGTAACTTCACTTTGTAGAGAATCTGAAAACAAAAGAAATGTGCGTAATATGTTTCACATTATAATTGATTCCAAAGCCAATGTATAATCGATTTCATGCCGTATTTATTTTTTGTTTTCATTAATAATAATATTAATGGAATGGTAATAACTAGAAATAATAAAATAAAATATTAATAATTATAATAATACTAATATTAAACAATAGTAAAAGTAATAAATGGTACAATACATCCAAATGGTAATTACAATAATATTTTTAAATCTATTTCATTACTCAAATCTTTTAGAAATTTTAACAAACTTTAATTTTAAATTCACTCTCAATCATTCCATAATCTTTTTAAAAGAACAATACACAATTTATTCTCAAATCACTTAAATTTCACCATTTCTGTTGTGTTTTTTCTAAATACCTTCTCAAGTGAACACATTATTGTTAAAGTTTTTAACCTTTCTTTCTTCAATAATAGAAATAAGGATTAGTGTTGTTAGTAATTTGAAGGAAATATCTTTTTCATATTAATTATTTATTTATTTACAAGGTGATGGTTCTGCAATATATGTGTGAGAGGAAGAGAAACTTACCTATGTTACCGTGTAATATGTATAGAAAATGAACTTTAGTGATTTTGTTTAAAAATACAAAATTTAAATGTTTAATACTTTTTTGTCTTAATGTTTGTTCAAATTATTTAGTCTAGTCTTTCAATTTGTTTTTCCCTCAACGTGGTTATCATTTTTCTCAATATAATTGCATATGATTCGTTAATACGGGCTATAATAGTGAGATATGAACATTTTTAGCTTAAGTGGATATTGCATGACTTTGTAGTTGAGGCTGAAAATCCAATCTTTTAGGATAATGATACTTTGACAACATTTTTTTGACAACATTTTAACACCATTTACGTGTCCTTCTGTGATTGGTCTATGTTGGTGTTTATGATTATTATTATTGATTGTGGAGTAATTTTCGACTAATCACAGAATAACATGTAGATGATATAAAATGTTGTAAAAAAAAGTTGTGAAAGTATCATTATCTAATTTTTTATTTTGTGAAGATTGAAAATAGAAGCAAGATTTGAACAAATAATATTTGTTGTTACTGAATTCTTCCAATATTTGGAAGTAGAAATTTTCCCTTCTTATACAACCCTTCTTATACAACCCTTCTTGCTTTACCTTCTAATTATGTAACAAGTTGCACACTTTCAACTCTTATCATTTGAGATTTTGTGGGCTGAATTTTTAGTTGTGTGTGAAAATTTGATCTTATTGGAATTGAATAATTCAAACGTATTAAAGTAACATTAAATTACACAGTTCTAAGAAAACAAATATCATTTTGTCCGAAAGCTCCTATTATTTATGGATAAATAAAAAATTATATAATAATGTAAAAGATGTTTTAAGTTGGTTAATGTAAATATAAATCTTGTTTTAGTTATCGATTTTGAATATATAGATATAGATTTATTGATTAGAATATTTGAGAGAGATCTGTGATAAATGAAAAGAAGAAAGTAAATGATGAAGCCACGTGCGCAGCCATGAAAAGGACAAGTGCGAATAAGCCTTGCGTCCCTTCTTCGTCATACATGCACGCACCTATCTATCTTTTTCACTCACAAAAAAAGAAATAATATTATAGTTGCAGAATTTATTCAACTTCAAATTCAAACCGTCACATACGACCTTCTGGTCAAGCCTCACCAAGAACAATACAAAGCCCACGCATAAATACTATTGGTGTGCTATCTACATCCATACAATACCCTATTTCTCTATTACCACCACCCTACGTGACACACTCATATCTAAACACAGTAATAATAATAACAATCTCCAACACTTTCTTCTTCTTTCTTTGTTCTAGATTTGTTGCTGA

Gene Sequence:

>Vu_29779(+)