Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29573 LG8 27745115 27745639 CBL-interacting serine/threonine-protein kinase 5
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 27745117 stop_lost&splice_region_variant p.Ter175Glnext*?
G/A 27745147 stop_gained p.Gln165*
T/C 27745153 missense_variant p.Arg163Gly
G/A 27745257 missense_variant p.Ser128Leu
C/T 27745294 missense_variant p.Ala116Thr
C/T 27745303 missense_variant p.Ala113Thr
C/G 27745337 synonymous_variant p.Thr101Thr
G/A 27745359 missense_variant p.Ala94Val
G/A 27745362 missense_variant p.Ser93Leu
T/C 27745368 missense_variant p.Lys91Arg
C/T 27745490 synonymous_variant p.Thr50Thr
C/T 27745507 missense_variant p.Glu45Lys
T/A 27745520 missense_variant p.Lys40Asn
A/G 27745544 synonymous_variant p.Ser32Ser
C/T 27745552 missense_variant p.Glu30Lys
G/A 27745587 missense_variant p.Thr18Ile
C/T 27745626 stop_gained p.Trp5*
T/C 27745628 synonymous_variant p.Val4Val
G/A 27745633 synonymous_variant p.Leu3Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29573.1
MKLVWHPHIVQLKEVMATKGEIFLVMEYVEGSELFTKVNKGKLSEDLARTYFQQLINIVDYCHSRGVTHRDLRPENLLLDQNEDFKLSDFKLSALPKQRRTKDMLVMLCWTPAYVAPYVLKKKGYDGSKVDIWSCGVILYALLYSYLPFQGEKVMRIYRIVFRAQYELPEWVSS*


CDS Sequence:
>Vu_29573.1
ATGAAACTGGTATGGCATCCCCACATCGTTCAACTCAAGGAAGTCATGGCCACAAAAGGAGAAATATTCCTCGTCATGGAATACGTTGAGGGTAGTGAGCTCTTCACAAAAGTCAACAAAGGAAAACTCTCTGAAGACCTTGCCAGAACGTACTTCCAACAACTCATCAACATCGTCGACTACTGCCACAGTCGCGGCGTCACCCACCGCGACCTCAGGCCGGAGAATCTCCTCTTGGACCAGAACGAGGACTTCAAACTCTCTGACTTTAAACTCTCAGCGCTGCCAAAGCAACGCCGCACGAAGGACATGCTTGTAATGTTGTGTTGGACCCCTGCTTACGTGGCACCATATGTTCTAAAGAAAAAGGGCTACGATGGTTCAAAGGTTGATATATGGTCTTGTGGGGTAATTCTTTACGCCTTGCTTTACAGCTATTTACCCTTCCAAGGTGAGAAAGTTATGAGAATCTATAGAATAGTGTTTAGAGCTCAGTATGAATTACCCGAATGGGTTTCATCGTAG


Promoter Sequence:
>Vu_29573::LG8:27745639-27747639(-)
CGTGTTGCTCCACCACCCCCCTTATTCCCTCCCACCTGTTAAATCTATTTTATTTTCAAAACTATCCTTCTATGTTAACTTTTTTATTTTTTATCTTTTGGAATTCTTTTAACATATTTCAAAACTCTAATTTACCTTTTTTTTATTTTTTATCTTTTGGGATTCTTTTAACATATTTCAAAACTCTAATTTATCTCTCAATTTCATTCATGTGGCAGCTCCACCCTACCACCACACCACATCTTTCACTCTTCTTCTCTTCCCATCTTCGTTCAAGGTTTTCTTCTTCCTTTTCTTTCTTTTTCTTTTTCTTTTTTTTTCAACATTCTCTTCTCAACTTTCCTTTCCCTTTGCTTCTTTCCGTTGTTGGTGTTGATTCCTAGTGTGGAGAAGCATAGAGGAGGAGCGTAGATCTAGCGGTAGATCTGGTTTTATATTTCCATCTCAAGTTAGTTTAAATATGTATATTTGTTTATCATGTGTTGTTGTGTTTGGTTGTCTCTGAGAGCTGCGAAGGCCAAAACAAATGTGGGATATTTGTTCGGCCTTAAACGGATGTCGACATCCGTTTCACCTTAAACGGATGTTGACATCCGTTGAAAGATGACAACTGTTTAAAGCTTAAATATTTATTTTAGGGTTTATTTGATTACGCACCTGAACGAAGCACCTCTACAACCTTTGAGCACCACCACACCACCAAGACTGACTCTTGGCACTGGATCAATTCCTTCCACCACCACTAACCTTTGTAATCTCCCACGCACACCACGTAATGAAATTCTACCGCAGTCTCACATAGCACAACGAATGAGAGGAAGAAGTTCAACTTTAAAGAGAAAGAAGAGATTGTGTGTTTGCCACTGCATGTAGGGTACCAGGTATATGTCACTGAAATGGGTTGGGAGTGGGAAAAAATTCAAAAATATTAACCCTAAAAATAAAATTTTACTGAAGGGCAAAACAGTAATGGGGAGGTGGAGGAAGTACGGGGTGGTGGTGTAGGGAGCAACACCCATAAAACAAAGGGAAGAAACACATTCGGGTTTTGATTAGTTTTCCCAACAAAGTAGCAAATCTGGTAATTAAACAACCCACTAAATAAATTAGGAATTGTTTTATGTCTTTTTGTTGTTTACACTCCTTGTTTCCTAAATTCAATTTACCCTCCACATCTTGATAAACGAATCATGAGTTAATCCTAATAAAGGAGATCAAAGAAAACTTCATTTTTCAAAACTCAAGTGAGTTAGGATTAGAATTAAGGTGAGTTTGATTCTATTATAATATTTTAATTAACTTTTACAAACAATATCATTTATATATAGGTTTAAATATTCGGATGATCCTCATATTTAGGAATCTCAAATGGGTTCTCTTGTTGAAAATCGTCTCAATTGAGTCCTAAATTTTGAAAAATCGTAACAATTAAGTTTTTTTCGTTAAGTGTTGACAGACGACGTTAACTGATGCTAACATGTTGCATAGTTAATATGCTGATGTTAATTGTTTTATTATGCGGAATTTTTATTTAAATTAAGAGATTTTGACATGACAAAATTTAATTGGTTTATGTTAAAATAATAGATTACAGATTTTGTTTTCTTCTTCTCCTTCACGGTTCATTTGTCACTACACTAGGTATTCTTCTTCTTCATCATACTTGCACCATGAAGATTTTCAACCCCTCTTAATGTTTTCTTTGGTGGTATGTCCCTTGGACACCATATTCATCAAAAGCATCAATCTTTCCCATCTAGGTTCTTCCCATCTCCACTAATTCCTCCCATGGATTTGTTGAACAAATCTGACCAAGCAAACCCAAAAACATAATATTCAGTAAATACGGGATGGGGCAGGTCCTAGGGCAAGGAAACTTCGCCAAGGTCTACTACGGCAGAAACCTCGTCACCAACGACAATGTCACCGTCAAGGTCATAAAGAAAGAGAAGCTAAAGAAAGAGTGACTGGTGAAGCAGATCAAGCGCGACGTTTCGATC


Gene Sequence:
>Vu_29573(-)
ATGAAACTGGTATGGCATCCCCACATCGTTCAACTCAAGGAAGTCATGGCCACAAAAGGAGAAATATTCCTCGTCATGGAATACGTTGAGGGTAGTGAGCTCTTCACAAAAGTCAACAAAGGAAAACTCTCTGAAGACCTTGCCAGAACGTACTTCCAACAACTCATCAACATCGTCGACTACTGCCACAGTCGCGGCGTCACCCACCGCGACCTCAGGCCGGAGAATCTCCTCTTGGACCAGAACGAGGACTTCAAACTCTCTGACTTTAAACTCTCAGCGCTGCCAAAGCAACGCCGCACGAAGGACATGCTTGTAATGTTGTGTTGGACCCCTGCTTACGTGGCACCATATGTTCTAAAGAAAAAGGGCTACGATGGTTCAAAGGTTGATATATGGTCTTGTGGGGTAATTCTTTACGCCTTGCTTTACAGCTATTTACCCTTCCAAGGTGAGAAAGTTATGAGAATCTATAGAATAGTGTTTAGAGCTCAGTATGAATTACCCGAATGGGTTTCATCGTAG