Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29346 LG8 23505527 23506915 PREDICTED: ethylene-responsive transcription factor RAP2-3-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/C 23505545 3_prime_UTR_variant
G/A 23505564 3_prime_UTR_variant
T/G 23505598 3_prime_UTR_variant
T/G 23505770 3_prime_UTR_variant
C/T 23505958 synonymous_variant p.Lys252Lys
C/T 23505963 missense_variant p.Glu251Lys
C/T 23505964 synonymous_variant p.Glu250Glu
C/G 23506205 missense_variant p.Arg170Thr
G/T 23506277 missense_variant p.Pro146His
A/T 23506594 intron_variant
A/T 23506667 missense_variant p.Leu45Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29346.1
MCGGAIIADFIPRRDRSLAASDLWPNSFGKDDDFGFGYSQIANQLPSTVKTAQAPKVSEKVDTKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDEYSIQARNPIPPLPFATQKPTPYQQQYRCDLNNAPRNLNFEFGYDLNHTGAFSSHVDTVNADSVVASGDENSGLASGSEGAHSTNEFMGSGEKVNGYFNGTAIEKEKEIEVIEAEEEKNKLQELSEELMAYENYMKFYQIPYYDGQSMPPNNVQESVVGDLWSFD*


CDS Sequence:
>Vu_29346.1
ATGTGTGGCGGTGCCATCATCGCTGACTTCATACCCCGCCGTGACCGTTCTCTCGCCGCCTCCGACCTCTGGCCAAACTCCTTCGGAAAGGACGATGATTTCGGCTTCGGTTACTCCCAAATCGCTAACCAACTACCCTCCACTGTCAAAACGGCCCAAGCTCCCAAAGTTAGCGAGAAAGTTGACACTAAGCCAGTGAAAAGGCAGAGGAAGAATCTCTACAGAGGGATTCGGCAGCGCCCTTGGGGCAAATGGGCTGCGGAGATTCGCGATCCTAGAAAAGGGGTTCGTGTCTGGCTGGGTACCTTCAACACTGCGGAAGAAGCTGCAAGGGCCTACGATCGTGAAGCTCGAAAAATCCGCGGCAAAAAAGCTAAGGTGAATTTCCCTAACGAGGACGATGAATATTCCATTCAAGCTCGTAATCCGATTCCACCCCTTCCTTTCGCAACCCAAAAACCAACCCCGTATCAACAACAGTACCGTTGTGATCTCAATAATGCCCCTAGAAATCTCAACTTCGAGTTTGGTTACGACCTGAACCACACTGGAGCATTTTCATCCCACGTGGACACTGTCAACGCTGACTCGGTTGTCGCTTCCGGCGACGAAAATTCAGGGTTAGCGTCCGGTTCAGAGGGCGCTCATTCGACAAACGAGTTCATGGGGTCTGGTGAGAAAGTGAACGGTTATTTCAACGGCACGGCGATTGAGAAGGAGAAAGAGATAGAGGTGATTGAAGCCGAAGAGGAAAAGAACAAATTGCAGGAGCTTTCTGAGGAACTGATGGCTTATGAGAATTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATCTATGCCACCGAATAATGTTCAGGAAAGTGTTGTCGGGGATCTCTGGAGTTTCGATTGA


Promoter Sequence:
>Vu_29346::LG8:23506915-23508915(-)
CTCAGTTTTATGACCCTAACCTGTTCTAATTGACTCATACAAGCTAGCCACACTGTTCAATTGCACTCAAGACCACCTATGCTCAAACTCCCTACCTCAGTTCCTCTCAAAGGACCAAAAACAATACTCTTTTAACCTTTTACTCATCTAACATGACTAACACATGATTTCCACCTCAACCACATCTCCCAAACCCAATTGGTCATAGGAGAAGAATCAGATGTCTGAACGCATCAGTCTCACCTTCGACGCCAGCGCATATGACTAGTCACAACTGACTGGACCAGGCTAGGGCTGCTCTATGATCATGGATGTGCCAACTTAGGTTTTTAAGATTCTTCTGTCCTACCAACAAAGTGCTCTCAACAAGTCACAATTGATCCCTCCAAACTGTTTCAACACTGTAAACTCACCCTAGACCTCTGTCACTCAAAATCACTATGTCACTTCCCTTAAATTGACCCTTAGAGGCTACCAAATTGTTAAACCGCTTCTTTGATTACTACTACAATAGAGCCTCATCCCTAACCACTTCCCATACGTTAAATATACAACAACTAATTCCCCACCAGTCACATTCATAAATTCCACAGTTCAATCTCACCAATTGCACATTTCAGTTCATGCCATCCAATCAACTCAAAAATGAAACACACAGCTCAAAGCAGTACAACATTCCAGAGTACAACATACCTACATTTATCAAACAGATTCAAGCATTCCATTCAAAGATAAATAAATAAATAAATATGTTACTATTTTTTTGAAAAAATTTATTTATATGAAGATAATAACTGTGACGCACGTGTCTTGTATAATACACTTGATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTCAACACATTCATCCTACAATGAATTTTTTTATAAGTTATTTTGAGATTTAGGAGATTGATTACACAGACTTTGAGTTGAATTTAGACAGGGTAGATATTTTTTGTGAGAAAAATATGTATATTCCAATGCGGTCTGTAAACGGTGGCAAGCGAGTGGCAAGATAAAAGTCTATACAGTTTAGACTTTACCATTCTAACTAAGTTTGCTTATCAAAGACGCAAGCCAGGATTTGGTGAGTATAGGACAGTTTTGGTTGCCAAAACAATTTTTTAATCACTTAAATAAGAGTTCATAAATTCTTAATTTATTTCCTGTAAATTAATAAATTTATTTCTGGTTGAATAATATATAATTATAAGTATTTAACGGAGATTAAATGCTTATTCAAGGTCTGTAATAACATTTAATAATATTACTGTGACCGGAGATATGTTCAACTGTTAGAAAATGGTTACAAGTTTAGTTATTTTTAGTATTTAAGTTACAAAAGATAAACTACAAAGAAATAAAAAACTATGGAAATAAGATTTATCAAAACAAAATTTTATAAAGCTGGAATTTGAAAGTGTTAATTGATAAACCAGTTAGTAAACTACGCCATTGTTATTTTACCTTTTTCAAATTAATTAAATTCTTATTATTTTTTACTATATATATATATATATATAATTTGAAAAAGTCATTTTTGTTTAAATTAGTTGATCTGATAAATGTTAATCAAATTTATTTTATTTTGTTTAAAAGGTTATTTTTTTATTTTATAATTGAAACTACTCTTATATTAATTTATTTTTAATAACTTTTATTATGAGTAAATTTTCACATAATATTATGTAATGAATATTAGCTATTTTAATCCGTAATGTGGACAATAAAAGTTCATGAAACACTTATCTTAATATTTCTGTATTAGTTAAATTGTTTTATAAATAGTTAAAAAAGATAAGCATTAAAAGTAGATAGAAAGAATAAAGCCACTTGTGGATGGGTTCGCGAAGGGTAGCATTGTAGCGGAAGGTTCCTGATGTGTCTGTCAACCACTTTCTCCCCTGTTTTTCCAACTACATAAGCCATTCCAACCCTTCATTTTTTCTC


Gene Sequence:
>Vu_29346(-)
ACGTCATTTCTCTCAACACCTTTTCCCCAATATTTCTCACGACCCACTTCAACTCTACTTCTAAAACCCATTCCCAAAACCTTTCTTTCACCACTCACCATAACTTCCTTTCATCATGTGTGGCGGTGCCATCATCGCTGACTTCATACCCCGCCGTGACCGTTCTCTCGCCGCCTCCGACCTCTGGCCAAACTCCTTCGGAAAGGACGATGATTTCGGCTTCGGTTACTCCCAAATCGCTAACCAACTACCCTCCACTGTCAAAACGGCCCAAGCTCCCAAAGGTTGGTGTTCTTCCATCTTCAATAACTCTTTTTTTTTTTTTTTTTATCATGTTAAGGTTTTTTTCTAATGTGATTTTCCACCAACAGTTAGCGAGAAAGTTGACACTAAGCCAGTGAAAAGGCAGAGGAAGAATCTCTACAGAGGGATTCGGCAGCGCCCTTGGGGCAAATGGGCTGCGGAGATTCGCGATCCTAGAAAAGGGGTTCGTGTCTGGCTGGGTACCTTCAACACTGCGGAAGAAGCTGCAAGGGCCTACGATCGTGAAGCTCGAAAAATCCGCGGCAAAAAAGCTAAGGTGAATTTCCCTAACGAGGACGATGAATATTCCATTCAAGCTCGTAATCCGATTCCACCCCTTCCTTTCGCAACCCAAAAACCAACCCCGTATCAACAACAGTACCGTTGTGATCTCAATAATGCCCCTAGAAATCTCAACTTCGAGTTTGGTTACGACCTGAACCACACTGGAGCATTTTCATCCCACGTGGACACTGTCAACGCTGACTCGGTTGTCGCTTCCGGCGACGAAAATTCAGGGTTAGCGTCCGGTTCAGAGGGCGCTCATTCGACAAACGAGTTCATGGGGTCTGGTGAGAAAGTGAACGGTTATTTCAACGGCACGGCGATTGAGAAGGAGAAAGAGATAGAGGTGATTGAAGCCGAAGAGGAAAAGAACAAATTGCAGGAGCTTTCTGAGGAACTGATGGCTTATGAGAATTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATCTATGCCACCGAATAATGTTCAGGAAAGTGTTGTCGGGGATCTCTGGAGTTTCGATTGACGAGGAGTCAAGGGTGTTTATTTCTTCGTCAATACAGTCAAAAATTTCTTCCCGTTCTGCTGACTAAACTAACATCTCTGCGTTTTGGCAGGGATGGACAGAAATGTAAATTGGGTGCTTCGGTGGTAGTCGTCTTCATGAGTTTCCAACTTCTTTTCGCCATCTTATTATTAATTTATTGTTTCTAGAATTTATTTGTCTTCTACTTTTGTTGAATTGTAATTTTTCTTTTGGTGGTATGTTCAAACGCGATTTCACCGGATAAATTTCAAAGTCTTTGAATTTCG