Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29291 LG8 22253076 22253628 leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 22253088 missense_variant p.Phe5Ile
C/T 22253105 synonymous_variant p.Val10Val
T/C 22253121 missense_variant p.Cys16Arg
G/A 22253122 missense_variant p.Cys16Tyr
T/C 22253127 missense_variant p.Phe18Leu
T/C 22253129 synonymous_variant p.Phe18Phe
T/A 22253174 stop_gained p.Tyr33*
G/C 22253182 missense_variant p.Trp36Ser
C/T 22253194 missense_variant p.Thr40Met
A/T 22253260 missense_variant p.Gln62Leu
G/A 22253269 missense_variant p.Arg65His
G/A,T 22253278 missense_variant p.Arg68Gln
C/G 22253287 missense_variant p.Pro71Arg
C/T 22253288 synonymous_variant p.Pro71Pro
A/G 22253302 missense_variant p.Lys76Arg
T/A 22253399 splice_region_variant&intron_variant
T/A 22253408 missense_variant&splice_region_variant p.Val87Glu
T/C 22253511 synonymous_variant p.Ser121Ser
A/T 22253544 missense_variant p.Arg132Ser
A/G 22253548 missense_variant p.Thr134Ala
C/G,T 22253601 synonymous_variant p.Ser151Ser
G/C 22253621 missense_variant p.Cys158Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29291.1
MTGPFPLAIVAMPLLCHFHLGSNFFSGQIPPKYGTWQHLTNSWETSPGAWKPHRASRALHWQLQRLLRRHPAGDWKLVPACPFRRRVNALSDSLTPKLGNLESLKLMDLPNKVLSGEVPTSFVELKNLTLLRATAPPSLFVICVITFTGSSIMQHNHCS*


CDS Sequence:
>Vu_29291.1
ATGACCGGTCCCTTCCCCCTCGCCATCGTCGCCATGCCCCTCCTCTGTCATTTTCACCTCGGCAGCAACTTTTTCTCCGGCCAGATCCCTCCCAAGTATGGCACCTGGCAACACCTAACGAACTCATGGGAAACATCTCCCGGAGCTTGGAAACCTCACCGCGCTTCGCGAGCTCTACATTGGCAACTACAACGCTTACTCCGACGGCATCCCGCTGGAGATTGGAAACTTGTCCCAGCTTGTCCGTTTCGACGCCGCGTGAATGCGCTCTCCGACTCGCTCACTCCTAAGTTGGGGAACCTGGAGAGTCTCAAGTTGATGGATCTGCCCAACAAAGTTCTCTCCGGCGAAGTTCCGACGAGTTTTGTGGAGCTCAAGAATCTAACTCTGCTTAGAGCTACAGCTCCTCCTTCTTTGTTTGTGATATGCGTAATCACTTTCACGGGGTCATCCATTATGCAACATAACCACTGTTCATGA


Promoter Sequence:
>Vu_29291::LG8:22251076-22253076(+)
TTACTATTCTCAATCACACAAGGGATGCAAAATGTACCTAGGTCCTTGCACTTTTTAGGAATATACGGGACAGATTTATCGATAAGTGCATATACATTTCTACCCATGATGATCCTTTCATCTCCTTTCATTTTCCTCTTATGTGCGCACATCTCCTTATGGAATTTGGCATACCTTGGAATCTGTTTGATTGCATCTAGTATAGGTATGTTCACCTCTACTTTCCAATATTTTTATATCTACCTCTTCAATCTTTTTGCTTGGAATGCCTTTTGGAGGGAATGGAAGAGGTATCAGACGGTGCAAGGTAGGAGATGCACTAGTGGTGGTGATGAAAGAAGAAGAAGGTCCACCTGAAGAAGAAGAAGAACCACCCGAAGAGGAAGAAGAAGGACCACCTGAGCCTTTCCGACCTAGGGAACGCTTTCGTAGCTCCTAGAGTCGGATAGGAATGCTTCCGTAGCTCTGACCTGAGCCTCTTCGACCTAGAGAACATTTTCGTAACTCCTAGTGTCCTCCGCTTGGTGTAGAAAGTAATGAAGACCTAAAGTGCATCAAAAATAGACTCCCTAGTACAACCTGAACGACTTCTCTTAAGCTCATAATAATCCCTGCACACCTCTTCCAATAGTCATTGATTGACAATTAATAGGAATAATTTCATTTATTGGTAGTAAATGAGTCAGACCTAATGGTAAGCTTAATATAATATTATAAATACATGTCTGATGAAAAAGGCAGGTAATTCAACTCTGATTACTCATTCTTATTATAAAATTTATTGAGTAAATCACTAACTTGAGCGTCGGAGTGTCTTCTGCAAACACTCTCCCCACGGCTAGGACACAGAAAAGAGAGAGAACAACGTAACCCAGATGATGGAGCAAACAACTTTGAATGCTTTGAGTAAGAGATCTCAACCCTACTGAAACAATAAATAATTTTTATAATTTTATGTAGATAATTATTTATTTATTTTGTTGGTTAAAAAATAATCAAATTTTAAAAAAAGGCAATTTTTTAAAATAATTAAAATTTTAAAAAATATAACTTAAAAAGTAAATTTGTTAAGAATTTATGCATATACAAAGAAAATAAAGAAAAAAATTATTATTAATGTTATAGATAATATATTTATATTCATAAAAACCATATGGTAACAAATTTATATTATAGTTATTAATCATAAAAGTATATAATTTATTGATAATGAAAGAGAATATTAAAGTTATAAATATGAAAATAAGTAAAGCAATTTTTCATAATACATGCCTCGTTATTTAACATTTAATTAATATAATATGTTTAATATATTTATGAACAAAAAAGCTGTAATTTTAAATGATATAAAAAATTCAAAATATGTCTTTTAATATAAAAAATTTAAATATATCTCTTTATTTTTTTATTCTAAAATGTTTAACAATTGTTATAAAAATTAACTTGTTTTAGCTTGATTAGATTTTATATTAAATTAAAATGGAGTGATATTTAACTTCATTATTTTTTTGGAATACTTTTTTAATGTAAAATATAATGAAATTGAGATAGAAACGACTTAATTAAAACACTAGTGCAATCGGAGGAAACGACAGCGGTTATTTTCGTTAATAAACACCAGTTTTTAAACTGAGGCATATTCAGACGAGGTAAAAAGTGATAGACTTTATGCATCGATTCAGAACCGAGTCATAAAAATAGTAAGATTATGCCTCGGTTTAAAATTAACTGAAGTAGTAACATTTTTTATTTTTTTAAATATTTTTTTTCGTTAGCCTTTATGCCTCGGTTCATCGTTTCTCACCCTCTCCTGAACCCCCATTTCCTCTCCTACCTTTCCCTCGTCGAGAACCAATTTTTCGGCCCAATCCCCGCCTCCTTCTCTGCACTCTCCGCCCTCCGCCATCTCAACCTCTCCAACAACGCCTTCAACGCCATTGTCCCCTCCAACCTCGCCCGCCTTGCTAATCTCCAAGTCCTTGATCTCTACAACAAAAACA


Gene Sequence:
>Vu_29291(+)
ATGACCGGTCCCTTCCCCCTCGCCATCGTCGCCATGCCCCTCCTCTGTCATTTTCACCTCGGCAGCAACTTTTTCTCCGGCCAGATCCCTCCCAAGTATGGCACCTGGCAACACCTAACGAACTCATGGGAAACATCTCCCGGAGCTTGGAAACCTCACCGCGCTTCGCGAGCTCTACATTGGCAACTACAACGCTTACTCCGACGGCATCCCGCTGGAGATTGGAAACTTGTCCCAGCTTGTCCGTTTCGACGCCGCGTATTGCAGACTCTCCGGCGATATTCCGGCTGACCTCGGAAGGCTTCAGAATATGGACATGCTCTTTCTTCAGGTGAATGCGCTCTCCGACTCGCTCACTCCTAAGTTGGGGAACCTGGAGAGTCTCAAGTTGATGGATCTGCCCAACAAAGTTCTCTCCGGCGAAGTTCCGACGAGTTTTGTGGAGCTCAAGAATCTAACTCTGCTTAGAGCTACAGCTCCTCCTTCTTTGTTTGTGATATGCGTAATCACTTTCACGGGGTCATCCATTATGCAACATAACCACTGTTCATGA