Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29209 LG8 19366040 19366956 transcription factor bHLH92
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, protein binding, protein dimerization activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
G/T 19366096 missense_variant p.Leu19Phe
A/T 19366744 missense_variant p.Ser153Cys
G/A 19366898 missense_variant p.Ser204Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29209.1
MDSFFPEKLLGEIFWDQLLPTDQSDVVQNSRIIKAEAFPPATQSAFLQYRDLPRRNNPLNGSNSESMSKRMLAFLRKSSPVERNNVEENERDRSFRHMINERMRRQRQRQCCLALHSILPHGTKTDNNSVIQTAAKEIVRLKGCREELQRKNSEAEGVCVRKKDGGRKIAYLRVADPECGIDSMVERLKWLKEEGVESRRIKSSFSPKELFAVLEIESGEEV*


CDS Sequence:
>Vu_29209.1
ATGGATTCATTTTTTCCCGAGAAACTTCTGGGTGAGATCTTCTGGGATCAACTTTTGCCCACTGATCAAAGTGATGTAGTTCAAAATTCCCGTATCATCAAGGCTGAAGCTTTCCCTCCAGCAACTCAAAGTGCTTTTCTTCAATATAGAGACCTACCCAGAAGAAATAACCCTCTGAACGGGTCAAATTCAGAGAGCATGAGTAAGAGGATGCTTGCATTCTTGAGAAAAAGTTCCCCTGTGGAGAGAAATAACGTAGAAGAGAATGAAAGAGATCGCAGTTTCAGGCACATGATCAACGAGAGAATGAGAAGACAGAGACAGAGACAATGTTGCTTGGCCCTGCATTCAATTTTACCACACGGAACCAAAACGGATAATAATTCTGTAATTCAAACAGCAGCAAAGGAGATTGTAAGGCTAAAAGGATGCAGAGAAGAGCTGCAGAGGAAAAATAGCGAGGCTGAAGGTGTTTGTGTGAGGAAGAAAGATGGAGGAAGAAAGATTGCATATTTGAGAGTTGCAGATCCTGAGTGTGGAATTGATTCAATGGTTGAGAGGCTGAAGTGGTTGAAAGAGGAAGGAGTGGAGAGCAGGAGGATCAAATCAAGTTTCTCCCCAAAGGAGTTGTTTGCAGTGTTAGAGATAGAGAGTGGTGAGGAGGTATAA


Promoter Sequence:
>Vu_29209::LG8:19364040-19366040(+)
TTCGGGGTTGGACAGAATAGAAGATGAGATTCGGCTTCTGAATTCAATCTACGAGGGACTAGTGGAGGATCCGAATGACAAGAGCGGATTCAAGAAAGAGGAGTTCAAGATCTTGTGGATTCCGATGGAGAGTGGATGGGGTGATGCGCGGAGGGAGGTGTTCAACACTCTGAAAAGCTACATAAAATGGTACGTGGTGGAGTACGTTGAACCCTTGCCAGGAACAAGGCTGATTGAAGAGGATCTAAAGTTCCAGGGTAAACCTATTCTTCCAGTGGTGAAGCCACAGGGCGTGCTGCTGAACGATGATGCATTGGACATCATCTTCGAATGGGGAATCGACGCATTCCCTTTCAGAAAATCGGATGCCTACCTACTTGCGCAGAAATGGAAATGGTTCTGGGACGAAGTAAAGAAAACAAATCTTCACGGCATACAGGTAATAAAACCCCCAAAACAAGCTTACCAAGTTTTCTGTACATTCACCGACTAACCCTAAAATTGTTGTGTGTGTGAATGAATAGGTGAAAGGTGATAGGTACGTGTTCATATATGGAGGCAGCGACAAGTGGAGCCGAGAATTCAGTGTGGCAGTGGATAAAATAAAGAGGCACGAAACAATAAAGAGGGCAGATGCAATAATAGAGCATTACCATTTGGGGAAGGACGATCCGAAGATAGTTCCTCGGTTCTGGATCGGAGTGGAAGGGAAGAGACAGAAAAAGCATTCGGAGAAGTTGGACTGTGAGATCCAAGAGATTGTAAAGTCTTTGCTTTGCCTGAAGCAGGACACGCAGGGATGGGCCATTCTCAGCAAAGGGTCCAACGTGAAGATTTTAGGGCACGCCCAACCCATGTATCAGACTGTGGCTGACTTCGAAAAGTGGAAAGACAGAGTTCTGGTCAAAGAAGGCTTCGACATTGCCTTCCAAGAGTACTATGAGACCAAGCGTCATCTTCCTGCTCCTCAACCATGCGAATTCAACACTCTTGATGTTCTCGCAACCATAACATGCCCTAATTCCTCTTGTGGACGCGTCATGGAGGTCACTTCCGTTAACTACAAGTGCTGCCATGGTGGCAATGTTGCTGACCACGCCTTCCCATCTCCGACAACCCAAACCTTATAAACCTCAATTACAACCTCAGTTTGTTTTGGAGAAACTACGCCAACCTGAATTAAGTGTGTGTTTTTTACTATATATCTATGTTTGCATGCATGTGAGTCTGAACGACTCGGTCCCTTGCGACCTCTTCATAAATAATGCCATATTTTGTATCTTCTGAGTCAGATTATTCAATAAATAATTCCTTCTCCGACCGCATTTCGAAATCCTTCCAATCTTTTAGTACTTCCACTGCTCATATTCAGTTATTTTTAGTCAAAAGTTAATGTGTATAAGGGTGCCGTTGAATACCAATCAAGCTTACAAATATACGATCACGATCTTATTGAAAGTAACCTACACTCAGTAGCTGCATAAAAAATGGTTTTCTGTAAGCTAACTTTTAAAACTTTTCTTCTCTCTTTATTATAAATTCCAAGACTACACCACCCAGTCATTTATAATTTCAAAAAAAGTACATGAAATAACCTTGTTTGACAATTTTATTTTTACCTCTAATTTCAACTAAATTAATGCCAAGTGTTGACATCATTCGTTTGGGTCACTCTCAAGTTGTAGTTGTTTTATGTGTTTTTCTTGCTTATACCACCCCCAATCCAATGGAAACAAAGTTGACTATAGTTTCACGAAAGGTGGGTGATGAAGTGGGTCCGTCATTTGGTGGGTTCTTGATCGGGGGCTACCCTCCAAAATAATTGGTTGGAGCTTGATTATGTGTATAAACTTTGACCCACCAACGGTCAAACACAGTTTAATTGACCGTGTTTTGAATGTGCTATCTACTCGCACCCCATTTCCTCTGCCTATAATGTATAAATACCCTTTCTCTCGTACATGCTCTTAACTAAATTAACCGAGAACAATAGTACTACA


Gene Sequence:
>Vu_29209(+)
ATGGATTCATTTTTTCCCGAGAAACTTCTGGGTGAGATCTTCTGGGATCAACTTTTGCCCACTGATCAAAGTGATGTAGTTCAAAATTCCCGTATCATCAAGGCTGAAGCTTTCCCTCCAGCAACTCAAAGTGCTTTTCTTCAATATAGAGACCTACCCAGAAGAAATAACCCTCTGAACGGGTCAAATTCAGAGAGCATGAGTAAGAGGATGCTTGCATTCTTGAGAAAAAGTTCCCCTGTGGAGAGAAATAACGTAGAAGAGAATGAAAGAGATCGCAGTTTCAGGCACATGATCAACGAGAGAATGAGAAGACAGAGACAGAGACAATGTTGCTTGGCCCTGCATTCAATTTTACCACACGGAACCAAAGTATACAGATATTGGTTTATATATATTATTACGAATATCTTTTGTGTAATTATATATATACATATATACCCATAAACATTTTGAGGATGAAAAATAAAACTAATCGAACTTATTCATAAAGTAATTCTAAGAAAAGTCCATTTTTTCTTCTTCACGTAAAAGTGATGGAAAGTGGTCGAAACAGAATGCATGTATATATTTTGAAATTTGAATCTCCCCAACACTCTGTATTTCATGTTTTGTGGCAGACGGATAATAATTCTGTAATTCAAACAGCAGCAAAGGAGATTGTAAGGCTAAAAGGATGCAGAGAAGAGCTGCAGAGGAAAAATAGCGAGGCTGAAGGTGTTTGTGTGAGGAAGAAAGATGGAGGAAGAAAGATTGCATATTTGAGAGTTGCAGATCCTGAGTGTGGAATTGATTCAATGGTTGAGAGGCTGAAGTGGTTGAAAGAGGAAGGAGTGGAGAGCAGGAGGATCAAATCAAGTTTCTCCCCAAAGGAGTTGTTTGCAGTGTTAGAGATAGAGAGTGGTGAGGAGGTATAA