Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_29131	LG8	18562117	18562566	PREDICTED: ethylene-responsive transcription factor ERF098-like	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
C/T	18562166	missense_variant	p.Ala17Val
T/C	18562218	synonymous_variant	p.Tyr34Tyr
C/A	18562295	missense_variant	p.Ala60Asp
T/A	18562368	synonymous_variant	p.Arg84Arg
G/A	18562515	synonymous_variant	p.Lys133Lys

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_29131.1

MEKIEREEHNKLKETKAAEKVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFESAEEAARAYDHAAFTMRGRVAILNFPNEYRSHARVYPQHIPSPSSSSITDENASSSSSITHANGGQQRQVFEFEYLDDKVLEELLQFEEKNNTES*

CDS Sequence:
>Vu_29131.1

ATGGAGAAGATCGAAAGGGAAGAGCATAACAAGTTGAAGGAGACAAAGGCGGCGGAAAAAGTCAGGTACCGTGGCGTTCGACGGCGGCCGTGGGGGAAGTATGCGGCGGAGATCAGAGACCCTTCTAAGCAAGGTTCAAGGTTGTGGTTGGGAACCTTTGAGAGTGCTGAAGAGGCAGCTAGGGCATATGATCATGCAGCTTTTACCATGAGGGGTCGTGTTGCAATTTTGAATTTTCCTAATGAGTACCGTTCTCATGCTAGGGTTTATCCTCAACATATACCATCACCATCATCATCATCCATTACTGATGAAAATGCATCATCATCATCATCCATTACTCATGCAAATGGTGGACAGCAAAGACAGGTTTTCGAGTTTGAGTATTTGGATGATAAGGTGTTGGAGGAGCTTCTTCAGTTTGAAGAGAAGAATAACACAGAAAGTTGA

Promoter Sequence:
>Vu_29131::LG8:18560117-18562117(+)

AAACAAATAATACAAATAAAATATGGACAAATTGCTAGATTCAATTACTAACTCATCTCTTTATAATAATTTATTCATAAAATATTCTAATATGTTCCAAATATATCAAAATCATATCAAATTAATGATATGATTTTTTTTTCTGCGAAAATAAAAACTATTTAGAAACATTCATGCTTCAACCAATATTAAAAAAAAAGTATAGTTTACTAAGTAATGTTATTTACATAATTTATGAATAAGTGATTCAATATTATGTTAAAAATGCTTACAACTAATATCTTCAACCAATAGGAGTTGGTGAATTGGTTTTTCTTATTTGACTTTTTTGTAAACAGTTTACAAAAACTTAATTAATTAATTAACAATATATATAGATGATGTTTAAATAAGTATTTTTAACTATTATCAAGATAAAAAAAATCAAAGAAAGAATGCATAATACACGAAAGTTTTTATACTAATTCACTAATTTACGTCCAATTATCTAACAACTTTAGTTAGTTTTTCACTAATATTATACCTACACTCTAAGTATACAAAGAACTTGAAAACTTTCAAGATTTACAAACAAGAATAAAATTATACACAATTACTCTAACATATCACTAACAGATGAAAATAATAGAAAAGAAAGAATTACAAAGAAAATACAAAAATAGAAATTACCTAATTTGTGAAAATATTACAATTTTCCTAATGCCAAGTAAGAAAGTTTTCAATAACACTTGATCTTGATTTTTTTGGATTATCAACGAATTTTACAATTGTTAATACATCAAAACACATCATTTCTCAAATTCTCATGAGTTTTATAAAAAGAACTTATTCAAAATAAGAAAGGATACATATATTTATTTAAAAAAAAAAGAGAATTATTCATATTAATTATGTAAGTTATTTATTCAATTAATACAAAGACAAAAATAATGTTTTAGTTTTTACTGATTAATCAATTAAAACAAAGAAGAAATAATAGTTTCAAGATATTAACAATAATCCATTGTTATTAATATCATTTATTAAGAAAGTAATTTTAATAATTTTTCTTCTAAATTTTAATTCATTTAGCGTTAAAACTAACTCTAATTTATTCATATAAGATTAAATTAATTTTATAAAATTTCTAATTTACGATCAATCTCGACACACATGTCCTATTAAAATCTACTTATTCTAAATCATTCATTGCATATGGACGCTATCAAAACAACAACTTGATCTTATCTTCTTTCACATAGTAACAACAATATATATATCTTTAATACCTAATCTTTATTAATTTAAAACTATGACCTAAATATTAGAAAATACCTCATTAAATATGTTGATATAATATAAAATGTAATACATCTAACATAATTTTTTCTAAAATCTTTTAAAATTTAAAATTTAAATAAAAATAATTAAAGTGTGATTTTATTAGACCAAAATATATCTTAAATATATAACTGATTACAGTGAGACAGAAACGCCATTCCTAGACAATTGTTTTTTTTTTCATCTGTGAAACGAGTGTGAACTTGATTTCCACTTCACACACTTTTGAAAGTGGACAAAAATCCTTAGCTATAACTAAATATCTAACATAATTTTTCTAGAATAGAAGTACTTCTATAGGTAGGGATACTAAGAAAAAAAACACTTCCTCTATTAAAAATAAATAAAAATGATATTTTAACAAAAACAAAATTTTCACATTTTTTTTAATATTTTTTTATTTTTTTATTTTTAAAAATATAAAAGTTTACTTTTTTAATTAACATTTTATTTTTATAATATGTGTCAAATAAATTTAGATGCGTATTAATTTATCATTACTAGAAAAAAAACATATGTACTTTCACTATTAAATATAAATAAACAACTTACCATTCTCCTTTTTCACATTTTTCATCAAAGGTACTTCCATCTACACGATCACAAAAGGTCAAAAGTAGCAATATATATATAACACAAAGAACATTGATGTGGATAACCAAAAAGCTAAGCATATTCCA

Gene Sequence:

>Vu_29131(+)