Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_29130	LG8	18549178	18549633	PREDICTED: ethylene-responsive transcription factor ERF096-like	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
G/T,*	18549456	synonymous_variant	p.Ser93Ser
G/C,*	18549465	synonymous_variant	p.Ser96Ser
G/A,*	18549480	synonymous_variant	p.Ser101Ser
G/A	18549525	synonymous_variant	p.Arg116Arg

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_29130.1

MEEEGSKGKAKDEEEHVKYRGVRRRPWGKYAAEIRDSMKHGQRSWLGTFTTAEDAARAYDRAAYAMRGPFAVLNFPDEYPPPAPTVSSSSSSSSSSSSSSSSVSTSSHGHVERRGRERNEDENQVFEFEYFDDKLLEELLGYDEDKSKHGK*

CDS Sequence:
>Vu_29130.1

ATGGAAGAAGAAGGTTCAAAGGGAAAAGCGAAGGATGAAGAAGAGCATGTAAAGTACAGAGGAGTACGTAGAAGGCCATGGGGAAAATATGCAGCAGAGATTCGTGACTCAATGAAACATGGTCAAAGGTCGTGGCTGGGAACATTCACCACAGCAGAGGATGCTGCTAGAGCCTATGACAGAGCTGCATATGCCATGAGAGGTCCCTTTGCAGTCCTCAATTTTCCCGATGAATATCCTCCTCCGGCTCCGACTGTTTCTTCATCATCTTCTTCTTCGTCTTCTTCGTCTTCTTCGTCTTCGTCTGTGTCCACTTCAAGCCATGGACACGTGGAAAGAAGGGGAAGGGAAAGAAATGAGGATGAAAATCAAGTGTTTGAGTTTGAGTACTTTGATGACAAATTGTTGGAGGAGCTTCTTGGTTATGATGAAGACAAAAGTAAGCATGGGAAGTGA

Promoter Sequence:
>Vu_29130::LG8:18547178-18549178(+)

TACATGTAAATACCCGCAGATATTTAAAAAAAATATATTTTTATAAATTATTAAAATAAAATTTAAATAAAATTACAAAAAATATATAAAATATAATATAAATTAAAATTTTATTTTAATTAAATTTAACCTTATAAAATATAAATTAATATTGATTTTAATTAAATTTAACTTTATAAAATATAAATTAAATTTTTACTTTTATTTTTTTTTGGGTAGCGGATATCCGCGAATACAGATAGTATAATACCCGCACCTAACCCGTTTATAAGCAGGTATGAAAATGTTCGCTACCGACAACCCAATGGTACTAAATATCCGCAGGTACCAACTATCCGTTGCGGATTTTATCCACGACTGTGAATTTTTTTGTCATCCCTACCATATGATCATACAGTAAAAAAAAAAGAAAATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATGTATTATTAGGTTTTGGGTGTTATAAAACAACAAGAAAGGAGAGGAAACCAACCATTTGACTACACTTAATTACCTATCAACAAATACAACTATAGGTAAGCACGTGTTTGACATTTCTGATTGTTTGTTTTTTCTTTAAGATGAGTTATTTCCTTTGTGAATTGATGACTGCATATATATGGAATCGAGGAAACAAAAAAAAGGATTAAAGTGAAAGAGTTTGAAAGCAACCAAGAGCCACCTCCTTGACCATCCAGATACAATGGACGCTCTACTTTTCAACGTGAACCACACGAGACAACATCCTTCATCGTCACGTGCTAACACTTTACTATTTTTTCCACATTTAACAACGATATTCTTATTATACTTTACTTTTTATACACATTTTTTGTGGAAAAAACCCCCTCAGTAACTCTTATTTCTCCTCCATTTAAGGTGAAAAACACTCATCTTTTCACATGCCTCGTCGTAAGGAGAAAAACATAGTAAAAATCAAAGAAAACAAGTAAAAGTTAACGTTGAACTTAAACGTGTTTGATTAAAGGCAAACATAAAAAACAATCAATACAAATATTACAATATAAATCTATAATTTACTAAATTATTTTCACTTTATCTCCCCTCAACTAAATTTATCAACTTTTTTTATTTTACTATTCTCATTTCTCACCAATCATGTCTCAACAAATCAAAAGTCATAAAAGCAATGAAAATAAATAAGTTATAATATATTACTAGCATTTGTGACATAATACATATGATATGACTCAAATAGGGCATGCACACTAGATAGTTAAGAACACGGTTATATATATGTTGACGTAATATAATAACAAAACTAAAATCAGAACATTACATAAAACTAAATGCTACCAATTTATAAAAACTAAAAACTAAACTTATTTCATATATATTCTTCCTCCAAACTCAATTATACGAAAAGAAAGAGATACTGTAAACAAAGTTTACTTGCTTTAACCATATCATAAAAGAAATATGCTTCAATTAATTGAAATTTCATTTACAATATTTTTAATTTTATTTATATCAATAACACTTTATGGAGAAAAAAAATCAAATCCTTCAAACTCAAGACATAAATGAAATTAGGCAACCTATACCCTGATCAAGAAAATGAGTTGATATTATTGATTTCATTATTTTTCTTCTACAGTTTCCTTCGTTTAAACTCTGATATGAAATAGAATCATATACAATTAATTGAATCATAAGTCGAAAAAAATATATTTAAATAAAGGGAAAGCAGTATGTAAAGTGTGAACTATTAGATTTTTTTCTTCTTGTAATTAATTTTTTTCAAATATGGTTAATGTGAGATGATATATCAAATAATTTGTAAGTAATAAATAATTGAAAAGTAACATTGTTTATATTTATGTGAGTGTGGAGGAAGCTTCCACCTTGAGTCCTTTGCACATGTCACAATAACACATGGTTAGAAATATTGCATATGCATATATACTCTTCAAAGTGTCTTGCACAGAAGGAAGAAAACATATGATCCA

Gene Sequence:

>Vu_29130(+)