Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29128 LG8 18532869 18536669 PREDICTED: transcription factor bHLH104-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, cellular response to glucose stimulus, cellular response to glucose stimulus, regulation of transcription, DNA-templated, iron ion homeostasis, cellular response to glucose stimulus, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, protein binding, protein dimerization activity, DNA-binding transcription factor activity, protein binding, protein binding
SNP Position Effect Amino acid change
A/T 18532899 3_prime_UTR_variant
T/C 18532902 3_prime_UTR_variant
C/T 18532922 3_prime_UTR_variant
G/T 18533040 3_prime_UTR_variant
T/A 18533095 3_prime_UTR_variant
T/A 18533188 synonymous_variant p.Ala216Ala
T/A 18533395 synonymous_variant p.Ala147Ala
T/A 18533430 missense_variant p.Asn136Tyr
C/T 18533471 downstream_gene_variant
G/C 18533566 downstream_gene_variant
A/G 18533568 downstream_gene_variant
C/T 18533773 downstream_gene_variant
C/A 18533791 downstream_gene_variant
A/G 18533799 downstream_gene_variant
C/G 18533820 downstream_gene_variant
G/T 18533997 downstream_gene_variant
T/C 18534128 downstream_gene_variant
C/A 18534254 downstream_gene_variant
G/A 18534313 intron_variant
A/G 18534315 intron_variant
C/A 18534462 intron_variant
T/A 18534792 stop_gained p.Lys3*
A/C 18534797 start_lost p.Met1?
T/A 18535128 5_prime_UTR_variant
G/T 18535135 5_prime_UTR_variant
A/G 18535166 5_prime_UTR_variant
G/T 18535338 intron_variant
G/A 18535454 intron_variant
T/C 18535459 intron_variant
A/C 18535772 intron_variant
T/*,A 18535924 intron_variant
T/A 18536464 intron_variant
A/T 18536474 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29128.1
MDSLGDSSCWDFLDYSFIDQAPPDFLWPNHSLSTEIEIPDDAVACEENTKKRGRTDSCCKAGSKACREKLRRERLNERFCDLSSVLEPGRPVRTDKPSILDDAIRVLSQLKSEAQELKTKNEKLLEEIKCLKAEKNELREEKLVLKADKERIEKQLKSLAIAPAGFMAPPVAAAAAYQAGVNKMAVYPNYGYIPMWQYLPQSARDTSQDHELRPPAA*

>Vu_29128.2
MTKGKNLIVTFCRFCDLSSVLEPGRPVRTDKPSILDDAIRVLSQLKSEAQELKTKNEKLLEEIKCLKAEKNELREEKLVLKADKERIEKQLKSLAIAPAGFMAPPVAAAAAYQAGVNKMAVYPNYGYIPMWQYLPQSARDTSQDHELRPPAA*


CDS Sequence:
>Vu_29128.1
ATGGATTCCTTAGGTGATAGCAGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCAAGCGCCCCCTGATTTCCTTTGGCCCAATCATAGTTTGAGCACTGAAATTGAAATTCCAGATGATGCTGTTGCTTGTGAGGAGAACACCAAGAAGAGGGGGCGTACTGATTCATGCTGTAAGGCGGGATCAAAAGCATGCCGTGAGAAATTGCGGAGGGAGAGACTCAATGAAAGGTTCTGTGACCTGAGCTCTGTTTTGGAACCTGGGAGACCTGTGAGAACAGATAAACCATCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAGTCCGAAGCTCAGGAACTCAAAACAAAAAACGAAAAATTATTAGAGGAAATAAAATGTTTGAAGGCCGAGAAAAACGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAAAGGATTGAGAAGCAGTTGAAATCCCTGGCCATTGCTCCAGCAGGGTTTATGGCACCCCCTGTAGCTGCTGCTGCTGCATATCAAGCAGGGGTGAACAAGATGGCTGTTTATCCAAACTATGGCTACATTCCAATGTGGCAATATCTTCCTCAGTCTGCCAGAGATACATCCCAAGATCATGAGCTTAGGCCTCCTGCAGCATAG

>Vu_29128.2
ATGACAAAAGGGAAGAACTTGATTGTGACTTTTTGCAGGTTCTGTGACCTGAGCTCTGTTTTGGAACCTGGGAGACCTGTGAGAACAGATAAACCATCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAGTCCGAAGCTCAGGAACTCAAAACAAAAAACGAAAAATTATTAGAGGAAATAAAATGTTTGAAGGCCGAGAAAAACGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAAAGGATTGAGAAGCAGTTGAAATCCCTGGCCATTGCTCCAGCAGGGTTTATGGCACCCCCTGTAGCTGCTGCTGCTGCATATCAAGCAGGGGTGAACAAGATGGCTGTTTATCCAAACTATGGCTACATTCCAATGTGGCAATATCTTCCTCAGTCTGCCAGAGATACATCCCAAGATCATGAGCTTAGGCCTCCTGCAGCATAG


Promoter Sequence:
>Vu_29128::LG8:18536669-18538669(-)
TCTTTATGATATTTTAGTCCTTTTACTAAATGTGTGGTAAGGAGTATATGATATAATATTATAATCTCAGAATGGTGGTATTAAGTACATGAATCCATTAAAAAAATATTTTTTATTCAATGATAATATGAATTACATAAATTAAGATTTGTGATGAGAAATTAAAGAAAGTTTTTGCGGTGCTATATTAATATTATTTAGATGGAGTTTACATGGTAAAAGGACTTCAAATATGTTTGATGTTAGTCTTAACATTTGAGTACAGCATACTTCATATAAATTTTTCAAAAAGATTGAGTATGAAAAAATACTCTATATCACTAAAATACAATTAGTGATTTTTGTATTTTAAAATATAAATAATTGTGTATAATTTATTCTAGCATCTTCTAATATAAAAAAAATATATATATTTTTTCGTTTTAAAAATTTAATTTATCTTATATTGCCAACAATATTTGTAATTTATATAAATAGAAAAAAAACCTTCCAAATAAAAATTAAACAATTTTTTCAGTTAAAAATATAAAAATAAAGCAACTAAAAATTATATGATCAACTATCATTAACATCTGTACCTACTTCTATCACCTTTGTGAAGAAGTCTATACATCTAATAATCAACTTTTTCCACCGTATTAAACATTTGATTTTTCAAGAGAAAACTTTAATCTAAGTAAAACTAATTAAAATAATTTTAATATTATAACAACAAAGATTTAAGCTAAAACTAATGCAATGAACAAGAAAAAAATTATTTCATTATTTAATATAAGAGAATTTCTTCTATTATATTATTATTTTCTATTATGTTAAAATGTATATATTTAGTAAGTGTTAAATTGGATGTTTGAAAGAAAAAAATGAATGAAAGAGGCAAAGACATAAAAAATTAATATATCAAACGTGCTGCATAAAATGTAATTAATATTTCAGTTCATGAATTTATAAGTTGATTTTAGGTTTTAGCTCACTATTCAGTTATAATAGTTTCTAAATAACCATGCTTAAAGCAAAGGCTACTTCATGCACCATATAACAGGGTTGCAGTAAGAAATTTGGTAGGGTGCAGAAAGTAATACCTAAAGCAGAGATAACCCTTAGAAGGGATGCTAAAACTTCAGGGGCCGAAGTTACATTAAAGCAGTCTTTTTCTTGCACCCCATATTTTCTTCTTACACCTCATAGTTATGGTAAAACTATATGTATTTCTACTGGTTCTCGTTCCTTTTATGTATAATAATTAAAAAGTGTTTTTATAAAAAGTAAAACTATATTAGAAAAATACAATATCATCGAATAAAAGATACATAATAAAATATATGCATATATAATATTAAAATATAATAATTTCACTATCATTTTATTGCTATTATTTTTTAATTAAATAATTAGGATAACATATAATCATATTCAACGTCGGATAGTAAAATAAAATACATCATATAAGAAAAGATTAAAATTTCATATATAGTATAAATTACACTAATATCTTTATTTATAAAATTCAAAAAATTTTAAAACAATATTTTAAATAATAAGTTCAATCTCAAACTTGAACTTGTATATTAATCAAATAAATAAATTCTTACCCGTAATTTATTTTATCAAATTTGACCAATTTATGAGTAGCTTAACTTATTTTTAAGATGTATTTTGAGAGATTAGAGGTATAATTTGGTTACAGCATAAAACAATAGTAGAAAAAAAATAGTTTAAAACAAATGGATATAATTTTTTTTTCAATATCTTAAAGTGATATTTAAGTAGAAAGTATTAAATGGTATAAACCACCTAAATAAAAAAACTATATTTAAATTTGAGAAATAAACAAATTTATGTTTCATTTAAAAATGAAAAATATATTAAAAAAATGAAAAATAAGTTAGGTAATATAATCAATTATATGTTTATAATTTGTATATTAAATTTATCATAAATTTGATTTCATGAAATGAAAATTTTCTATGCTAAAAGCCAAAATACTGTTCTTATTATTT


Gene Sequence:
>Vu_29128(-)
GCGTAGGGAATATTTGAAGGCGTTTTGTTGTGAGAGAAGATAGATAGGGCGGTTTGGTTAAAAGAAGTGGCAACCGCAAATGGATTCCTTAGGTGATAGCAGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCAAGCGCCCCCTGATTTCCTTTGGCCCAATCATAGGTTTCTTTCTTCTTTTTATGAACTTTTCATTTTTAACTATTCTTATTTCTTGATTGCATGTTTCTTTTTTTTGGGGTTCATTGTTGATCTTTATGCTATTGATTATTTGATTTGGTGAAAAATTAAGATTACCCTTTTTATATGTTAATCTGTATCACTGATTGATTTGTTCGTTGTATTTTTGTAGTAGCTCAAGTTCATTCCTTTAAACATTTTTTTTAAAAAAATGTTGTTGATTTGGCGATGTGTGGTGAAAGATTATTGCTGTTTTTTGCGGAATTTGATATTGCATGGTTGGATTCGTATTTTCTGATGTACTCTGATATGGAATTTGATTCGAATGGTGCATTAGCTCCCAGGTTTTAATTGTTGTTGTGTTATATATTTTTGTGTTTTGTTACTTAGAGGGAAAACAAAGTTCATCAGTGTTTTTGTTATTTTTCTTATTGCCCTGATGTATGGTAATGAATAGGATTGATTGTTCTTTTTGGGGTGATTCAACTCCTTTTGTTTATAAATTATTTTGAATTTTGTTGTTGCTTTTGTACTGGGAAATGTAAGATACTGAAAAATTATTTTTTATTTTTTTTTGTATATAGAGCTAGTGGTGTCTATTGATGCATCTAGCCAAATCACACTAGAGATTATGAATATTGTCTTTGCTTAATGTTGTGTAGCAAACTTGGTGTCTACGGATTATTGTAGCCTAATTACATGGTAGGACAATAGATGATGGGTGTTGTCTTTGCTTAATATTTTGTGTGGCATGGCTGACACGTTTTCTTTTTTCCTCTTTTTGCAAGTTTGAGCACTGAAATTGAAATTCCAGATGATGCTGTTGCTTGTGAGGAGAACACCAAGAAGAGGTATCTTGCTTGTTGCTTTTGAAGTGATGTACTATGTGATGATGTAGTTACTGTTATGAAAAGTTGATGAAAATATTGTTTTGACTCCATAGACTATCTTTTTGTAATTTCATTCGTTAACAAAAAGATGCGAACTTTAAAGCATGCATGATTGTTGTACATGTATCTGATGTAGTCTCTCAGACACCCGTTGAATCTCAAGCTTATGCTTTAACAGAATTGGTTGAGTTGCCTTTCTTTTTTGTGTTTTTGTTGGAGTAGTGATGCTGCCTTTTGAATAATTGCTTTTGTGATCAATTTGTTGCAAATCATTTGTAGGGGGCGTACTGATTCATGCTGTAAGGCGGGATCAAAAGCATGCCGTGAGAAATTGCGGAGGGAGAGACTCAATGAAAGGCATGCACGCTTTTATATATTGAATTTATAGTTGATGTCACAGAGTACTGGCTGAACTTTTAGCTTTTCCTGTAGCTGTTGCATAAGGAATCTATACTCTCCCCATTAATTTCTGGTTTCTTCACACATTTAGGTTGTGTTTCACGCATTGTTGTTTTAGATACTTGAGTTAGATGCATCGCATGTATGTGGTACACTGAATGTGTGAAATTTACAACTCTCTCATCCAATTCAAAGATTATCGTTAGGCATATGACTTCTCTGAGCACAAGGCAATACCAACTTGCATTAATTACCAGTTGTTACATTTCTTTGATAACTTTCTATGGTTATTGGAAAAGTGATCTTAGTTTCTAGATACTCAAGATCACCAGGTATGTTAGATACTCATGTAACAATCAACTCTTCCTGCTTTGTATTGTGTTTTTGCTGCTTTTAATGACAAAAGGGAAGAACTTGATTGTGACTTTTTGCAGGTTCTGTGACCTGAGCTCTGTTTTGGAACCTGGGAGACCTGTGAGAACAGATAAACCATCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAGTCCGAAGCTCAGGAACTCAAAACAAAAAACGAAAAATTATTAGAGGAAATAAAATGTTTGAAGGTCAGTATTGTTTCAGACATATTCTGTAGTGAGTTGAATATTTATTTCTCTTACTGCATTTTGGATTAGTTTTCTTTGAAATGTTGGGCTCTCTACATACTTCATTCTTGGAAAGAAAATGAATTTGACTTTGGTGAAACTATCAGAAGCTTTTCATCTTAAAATGATTAGACTTTATCATTTGTTTTGTTTTCTACTTATTTCTCCCGAAGAAGGCTTAGAGGGCTTCAAGCTTCACGTTACACCAGTGGTTATATCATTTGCACAGCTAAATTTCATGAGTCCTGTTGTAAGTAGTGGTGAAATAATGTGATTTTCGCATACACTTGATGTCAGAATGCACGCCAACAAAGCATTTAGTAAGGTGGTCCTTTTCTGCATGGAGAAGAAAAATAATTAGTGGTTCTGAAATTAAGCAGCTTATGAATTAGTAAAAGTTGATTGAAAAGAGTTGCTAGCGAGGTCTGTTACATTTACCTCTCTGATTATGTTCCTTAAAAAAAACGGGTATTGTAATATTCGTGCAGTGGTTCTTTTTTATCCTTTTAGAGCAAAAGTGGTAATTTTATGCTCATTGCTTTTGGATGCTTGTCCATTTTACTGTTTTTGTCTTAGACGAGGATTATATTTTAAATTAAACCCTCTCAGTAACAAGGTTTATGAATTATTTTAACATAGTCTTTGTAATGTCACTGCATCCTATGTTGATGGAATTATTTACTTCTGATTTAATTTTGTTTGTTTCTTTTGTTGTCTGCATTCAGCTAGCCCTTCCTCGAGTTAGTTATGCAACTTCTGTTGATTCTGCCTATCAATATTTTCATGTTCTTCCAGTTTTATGCATGACTAGCATGTGTAGTTCATGTTTGAAAATAAGTAAATCAGGGATTGTGATACTTCTGCCTTTCAGTTATGTTTTATAAAGTAATATTTTAAATGTAATTTCATGTATAGTTTCTCTTAGTAAAGAGATTTAAACCTTACTCAATTTTATAAAATGTTCAAGTTTATAAAGTGATACTTCTCAATTTCATGGAATTTTCAACCGATTTAAATTATCTTTCTTTGTTTCATTGAAGAAAACATCTTAGGAGTTCAAACTCTCCAACATTGCCTTAGTGTTAAAGTCAAAGTTACAGAATTTATTTGTTTGAACAGGCCGAGAAAAACGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAAAGGATTGAGAAGCAGTTGAAATCCCTGGCCATTGCTCCAGCAGGGTTTATGGCACCCCCTGTAGCTGCTGCTGCTGCATATCAAGCAGGGGTGAACAAGATGGCTGTTTATCCAAACTATGGCTACATTCCAATGTGGCAATATCTTCCTCAGTCTGCCAGAGATACATCCCAAGATCATGAGCTTAGGCCTCCTGCAGCATAGTGTTGCTTCTGTTATGCCTCTGCATCATTTCACAACACTCTCAAAGTATTGACATGTAAATACTGTCATTGCTTTGATTCTTTTTCACCCTTTTTACTTGCTATAATGTGCTAAATAGTTATACAAGTAAAACTATGATGGCTATGACATGAAAACTATTGATGTCCAATGTAAATTGCCCAATTCTTTGCTTCACAGTAGCTCTCAAAATTCCACATTTTTTTGGTGACTATGTTACTGATAGGGAGTATGTTTTGTGGATGACTGATCTTCATTTGGAAATCTGATGTTTTGCTTCAGTTGATTAAATTAC