Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28956 LG8 16466385 16468385 PREDICTED: probable L-type lectin-domain containing receptor kinase S.5
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 16466418 synonymous_variant p.Thr513Thr
G/A 16466427 synonymous_variant p.Ile510Ile
A/G 16466433 synonymous_variant p.Ser508Ser
G/A 16466583 synonymous_variant p.Cys458Cys
A/G 16466592 synonymous_variant p.Gly455Gly
T/C 16466612 missense_variant p.Asn449Asp
T/A 16466677 missense_variant p.Lys427Met
C/T 16466765 missense_variant p.Val398Ile
C/A 16466769 missense_variant p.Leu396Phe
C/G 16466781 synonymous_variant p.Gly392Gly
T/C 16466822 missense_variant p.Ile379Val
G/A 16466850 synonymous_variant p.Pro369Pro
T/C 16466859 synonymous_variant p.Ala366Ala
A/T 16467235 intron_variant
A/T 16467244 intron_variant
C/A 16467471 missense_variant p.Glu305Asp
G/T 16467661 stop_gained p.Ser242*
C/T 16467754 missense_variant p.Ser211Asn
T/A 16467755 missense_variant p.Ser211Cys
C/G 16467756 missense_variant p.Met210Ile
T/C 16468005 synonymous_variant p.Gly127Gly
A/G 16468120 missense_variant p.Ile89Thr
C/T 16468135 missense_variant p.Ser84Asn
C/T 16468143 synonymous_variant p.Lys81Lys
C/A 16468232 missense_variant p.Asp52Tyr
A/G 16468233 synonymous_variant p.Phe51Phe
C/G 16468371 missense_variant p.Trp5Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28956.1
MHLPWLVKYQYAATLFFVTIALTKVSCFQFNFPFFPDDSNLWLSKSSSILFDAIIVTPDIIDPIDHYSGRVFYIKPYQLWKEKSNQNQIASFNTTFVLNITPETTPGGEGLAFILTSDRTVPENSDGQWLGIVNATSNGTSQPGILAVEFDTRHSFTEDGPDNHVGININSINSIQQVSLMNNRLNLSSGQDVKIHIQYINDTISVFGAMSGTSEESMETLLVSPPLNLSSFLQKEVYIGFSASTSNYTQRNSVRSWDFSGDDIRDDDKSLLWVVYVGVPIVIVLIIIGGLVIFFLRWQKIRHMEGPEDAYPRIEDQIKYSSMAPKKFRLRELTKATGGFSLQNKLGQGGFGTKRNETHHSTKEIAGTPGYMAPETFLIGRATVETDVYAFGVLVLEVVCGKRPGNVYAQDEYKNSIVYRIWDLYGKGKVVGGVDARLKKEEIVEEEVNCVLVLGLACCHPNPHKRPSMRTVLQVLNGEAAPPEVPKERPVFMWPAMPPSFKDAEDSSLIQGTLTPFTEITGR*


CDS Sequence:
>Vu_28956.1
ATGCACCTCCCTTGGTTAGTCAAATATCAATATGCAGCTACACTCTTCTTCGTTACCATTGCCCTCACCAAAGTTTCCTGTTTTCAGTTCAACTTCCCTTTCTTCCCAGATGACTCTAATCTATGGCTGAGCAAGAGTTCAAGTATATTATTTGATGCAATCATAGTAACCCCTGATATTATAGATCCCATAGATCATTATTCTGGACGTGTTTTCTACATAAAGCCATACCAGCTTTGGAAGGAGAAGAGCAACCAAAACCAAATAGCTTCCTTCAACACCACTTTTGTGCTCAACATAACTCCGGAAACTACCCCTGGTGGTGAAGGCTTGGCCTTTATCTTAACTTCAGATAGGACTGTCCCAGAAAACAGTGATGGACAATGGCTTGGTATTGTAAATGCTACTTCCAATGGAACTTCACAGCCTGGTATTCTAGCCGTGGAGTTTGACACAAGACACAGTTTCACAGAAGATGGCCCTGACAATCACGTTGGCATCAACATAAACAGCATCAACTCCATCCAACAGGTTTCGTTAATGAACAATCGGCTCAATCTATCTTCAGGTCAAGATGTCAAAATTCACATTCAGTACATTAATGACACAATATCAGTTTTTGGTGCCATGAGTGGAACTTCTGAAGAATCCATGGAGACCCTCTTGGTATCTCCACCTCTTAATTTGTCTTCCTTTCTTCAAAAGGAGGTTTACATTGGTTTCTCGGCCTCAACAAGTAACTACACGCAGCGGAACAGTGTCAGATCGTGGGATTTCAGCGGGGATGATATTAGGGATGATGACAAAAGTCTCTTGTGGGTGGTTTATGTTGGCGTTCCAATCGTGATTGTTTTAATTATCATTGGTGGGTTGGTGATCTTTTTCTTGCGCTGGCAAAAGATTCGCCATATGGAGGGGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTAAATATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAAGGGAACTAACGAAAGCAACTGGTGGATTCAGCCTTCAAAACAAGCTTGGACAAGGCGGGTTTGGAACTAAGAGAAATGAAACGCATCACTCTACAAAAGAGATTGCAGGCACACCCGGGTACATGGCCCCAGAAACGTTTCTCATTGGGAGGGCAACGGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAGAGGCCAGGGAATGTGTATGCACAAGATGAGTACAAGAACAGCATTGTGTATCGGATATGGGATTTGTATGGGAAGGGAAAAGTAGTTGGTGGTGTTGATGCAAGGTTGAAGAAGGAGGAGATTGTGGAGGAAGAGGTGAACTGCGTTCTTGTTCTTGGTTTGGCTTGCTGCCATCCAAATCCACACAAAAGACCATCGATGAGAACAGTTCTTCAGGTTCTGAATGGGGAAGCAGCTCCACCTGAAGTGCCTAAGGAAAGACCAGTTTTTATGTGGCCTGCTATGCCTCCATCCTTCAAAGATGCTGAAGATAGCTCTCTCATCCAGGGAACTCTCACTCCTTTCACTGAAATCACTGGAAGATGA


Promoter Sequence:
>Vu_28956::LG8:16468385-16470385(-)
ATTCAAAATAAATATAAACTTCATTTTATAAATCAGTTTTATAAAATTGAATTAGATTTAAAATTTATTTTTTAACATTTCAGTTTTCACAGGAATATATACTCATATAAATAAAATAACATCATGTTATTTATCAGTAAGGAGTATGTTGAGAAGGATCCCATAAATCTATTATGGTTATGGATATTGAGTCCAATAATTGTGGTTGGAGGAATAAGTGAGCTTGTGGTTTGATAGGTCTCGAGTAATGAAACCTATAACCTTCCCACACTTTAACTCACACAGAATCCACCAGAATACTGAATGACCTCCTCTGATTTATAGAGAAACAAGAAAGAATACAAGAATATAGGAACGTGGAAGCCTAATCTTCCCCCAAGCAGACTACAAGTCTGATTCAGATACAAGAATTTACCAAAAGTCCCTATCCTTCTCCTCTCTAGCTATTTATACAAGTTTGACCTCCTAACAGATACATCTCCCTTCCTAACTGATAAAACAGTTAGGCTATTGACCCACTAACTAACTAACTACTTCTCCCGTCTGTTTCTTCTCACATACACCTTTAGCCTCCTATCATGGTTGGAGGAATAAGTGAGCTTGCTGGTGCATTGTATCGGAGAATTGAACACAAAAAGGGACAAGGGAGCTTGAAGTTAAATGCTAATCTAATAATGCTCCACATAAATTTCATCTGAAGGAGATTCTATCTGCCACAAAGAACTTCCACCCTTCATCTTTATTTATAGATTATAGAGTATATAAATATTAATGGTTAGATTAAATAATTTGTAATAATCTAATATGTAAATTCATGTTCTCGGATATTAGAGATTTCATCTTTTTTTTTCTAGACACCGAAGAGACTTAAACACCAATGAAATCTGAGTCTAACCACATAAGTGATCGACATCATTCTCTATCCAAAACCTCAAGAGAATAAGTTAGTGAGTCTTTCATCTTTATATAGTGTTTTATTTTTTTATTTCTATCCCGAGACTTGGACTCACACTTGAATTTTCAACATTCGGAAAAGTGATTTTGGTATCGGTAAATACAACTTGATGATTTTTTCATTGAAAAGTCAATTTTTTCCAATCGAAGTAATTATTTTATATATTGTTATATATGATGCGTGAAGATTAAAGCAAAAGCAAAGAAAAAGTCAATATTGTATTTATATTCAAACTAGTTGATTTGTGACTGAATATTGTGTTGAAGGCAAACTCTAGGTAGGTTCAGTGGAACATTTACAATTTGACTTGACTTTTGTTAACTGAAAGGGTTAATTAGTAGCATATATACAACGTTAAAATCGTTAAAATCATAGATGGAACACCGATCACAAGTGATAAATGCCTTCGGAATACTCATGAAGTACAAACTCAACTTGTGTAAAATCTTTGAGAAGCTATAAAAAATAGTTTATAATATTGTATAAGCTATTTTAAACTTTTTCCAGTCTTTTCCAAAGATGTTAATATGTTACATGAAAATAATTTCAGTGTATTTTCTTTTACGTTGAAATAACTTACTCAAAAATATTTACACAAGCACACTCCACTAGTGTTTCATTATGCACTTTTAGTAAACTTAATATATTTTTTAATCTGCGCCAATTACAGACCAAGACTTTTACCTTTCCAATCAACCTTTCTTTAAGATAAACTAACTGATCTTTACAATTTCATAACGTCTTCGTAGTCCTTATGCAACTTATTTTAATGTTTGACAAACCGACTATTCCGCAGGCACTTTAAGTGCTATAATATTGTTTTAATATATAACATCACCATCCGTGTTTTCTTTTTCTTCTTTTTCATTCCACAAAACGCGGAAACAAGAATTTTCTCGGAAAAGAATAACCTAAAGAGGCAATGTTTATATAATTAAAAAAAAGAATCAATTGACCCTACCCAATTATATATATACAAGATTTATATAAACAAAGGAAAGATGCACCATAAAGATTTTAGAAATCAAGCTTTCAAAACAGAAAT


Gene Sequence:
>Vu_28956(-)
ATGCACCTCCCTTGGTTAGTCAAATATCAATATGCAGCTACACTCTTCTTCGTTACCATTGCCCTCACCAAAGTTTCCTGTTTTCAGTTCAACTTCCCTTTCTTCCCAGATGACTCTAATCTATGGCTGAGCAAGAGTTCAAGTATATTATTTGATGCAATCATAGTAACCCCTGATATTATAGATCCCATAGATCATTATTCTGGACGTGTTTTCTACATAAAGCCATACCAGCTTTGGAAGGAGAAGAGCAACCAAAACCAAATAGCTTCCTTCAACACCACTTTTGTGCTCAACATAACTCCGGAAACTACCCCTGGTGGTGAAGGCTTGGCCTTTATCTTAACTTCAGATAGGACTGTCCCAGAAAACAGTGATGGACAATGGCTTGGTATTGTAAATGCTACTTCCAATGGAACTTCACAGCCTGGTATTCTAGCCGTGGAGTTTGACACAAGACACAGTTTCACAGAAGATGGCCCTGACAATCACGTTGGCATCAACATAAACAGCATCAACTCCATCCAACAGGTTTCGTTAATGAACAATCGGCTCAATCTATCTTCAGGTCAAGATGTCAAAATTCACATTCAGTACATTAATGACACAATATCAGTTTTTGGTGCCATGAGTGGAACTTCTGAAGAATCCATGGAGACCCTCTTGGTATCTCCACCTCTTAATTTGTCTTCCTTTCTTCAAAAGGAGGTTTACATTGGTTTCTCGGCCTCAACAAGTAACTACACGCAGCGGAACAGTGTCAGATCGTGGGATTTCAGCGGGGATGATATTAGGGATGATGACAAAAGTCTCTTGTGGGTGGTTTATGTTGGCGTTCCAATCGTGATTGTTTTAATTATCATTGGTGGGTTGGTGATCTTTTTCTTGCGCTGGCAAAAGATTCGCCATATGGAGGGGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTAAATATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAAGGGAACTAACGAAAGCAACTGGTGGATTCAGCCTTCAAAACAAGCTTGGACAAGGCGGGTTTGGAACTGTGTATAAGGGACTACTGGAAAATAAGGAGGTAGCTGTAAAGAGAGTTTCCAAGAACTCACGCCAAGGGAAGCAAGAGTTTTTGGCAGAAGTGACAACAATCGGAAGCCTTCACCATAGAAATTTGGTGAAACTCATTGGTTGGTGCTATGAGAATAGAGAGCTTCTCCTTGTATACGAGTTCATGCCTAATGGAAGCCTAGACAAGTACCTCTTTGGTGACAAAGATTGTGGTGATAATTATAACTTTAAAACACTGGACTGGGAAACTAGGCGAAGAGTGATTAATGGGGTGGCTCAAGCACTTGACTACCTTCACGATGGGTGTGAGAAGAGGGTTCTCCACAGAGACATCAAGGCCAGCAACATAATGCTGGACTCAGATTACAATGCCAAGCTGGGAGACTTTGGATTGGCTAGAACAATTCAGAAGAGAAATGAAACGCATCACTCTACAAAAGAGATTGCAGGCACACCCGGGTACATGGCCCCAGAAACGTTTCTCATTGGGAGGGCAACGGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAGAGGCCAGGGAATGTGTATGCACAAGATGAGTACAAGAACAGCATTGTGTATCGGATATGGGATTTGTATGGGAAGGGAAAAGTAGTTGGTGGTGTTGATGCAAGGTTGAAGAAGGAGGAGATTGTGGAGGAAGAGGTGAACTGCGTTCTTGTTCTTGGTTTGGCTTGCTGCCATCCAAATCCACACAAAAGACCATCGATGAGAACAGTTCTTCAGGTTCTGAATGGGGAAGCAGCTCCACCTGAAGTGCCTAAGGAAAGACCAGTTTTTATGTGGCCTGCTATGCCTCCATCCTTCAAAGATGCTGAAGATAGCTCTCTCATCCAGGGAACTCTCACTCCTTTCACTGAAATCACTGGAAGATGA