Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28873 LG8 15446816 15448895 PREDICTED: zinc finger protein WIP2-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 15446827 synonymous_variant p.Pro4Pro
T/A 15446992 synonymous_variant p.Thr59Thr
A/T 15446993 missense_variant p.Thr60Ser
T/C 15447049 synonymous_variant p.Leu78Leu
C/G 15447101 missense_variant p.Gln96Glu
A/G 15447115 synonymous_variant p.Gln100Gln
T/C 15447118 synonymous_variant p.Asp101Asp
T/C 15447201 missense_variant p.Val129Ala
C/A 15447208 missense_variant p.His131Gln
C/T 15447214 synonymous_variant p.Val133Val
G/A 15447306 missense_variant p.Arg164Gln
T/C 15447346 synonymous_variant p.Asp177Asp
A/G 15447498 intron_variant
T/C 15447553 intron_variant
T/C 15447620 intron_variant
A/G 15447633 intron_variant
C/T 15447671 intron_variant
C/G 15447724 intron_variant
T/C 15447833 intron_variant
G/C 15447949 intron_variant
A/T 15448053 intron_variant
A/G 15448167 intron_variant
C/T 15448178 intron_variant
C/T 15448184 intron_variant
G/A 15448197 intron_variant
G/C 15448202 intron_variant
G/T 15448212 intron_variant
G/T 15448234 intron_variant
A/G,C 15448367 intron_variant
G/A 15448368 intron_variant
C/T 15448392 intron_variant
G/A 15448396 intron_variant
T/A 15448429 intron_variant
C/T 15448432 intron_variant
G/T 15448480 missense_variant p.Gly229Val
T/A 15448612 missense_variant p.Leu273His
C/A 15448709 synonymous_variant p.Gly305Gly
A/G 15448727 synonymous_variant p.Glu311Glu
A/T 15448800 missense_variant p.Ile336Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28873.1
MADPYSNFFSPPFFHYPSPNPSTHHHHPYPHNFINQTTTTNITHNTFFHFQHHHHFQTTTTTSFSSSSPPSPPLREALPLLTLSPKNYDQREEHYQDQDQDQLCTAMDVEDNFNRTLHNPKEEDQEDDVHHSVTVALHIGLPSPSAAEIASVLSSACATDKEQRQGGGGDCDNNGIDDSSSGFLSNRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEEEPASEVEQDND*


CDS Sequence:
>Vu_28873.1
ATGGCAGACCCTTACTCCAATTTCTTCTCACCACCTTTCTTCCACTACCCTTCTCCAAACCCTTCCACCCACCACCATCATCCATATCCTCACAACTTCATCAACCAAACCACCACCACCAACATCACCCACAACACCTTTTTCCACTTCCAACATCACCACCACTTTCAAACCACTACCACCACCTCTTTTTCTTCTTCTTCACCCCCTTCTCCTCCCTTGAGAGAGGCCCTTCCTCTTCTCACCCTCAGCCCAAAAAATTATGACCAACGGGAGGAGCACTACCAGGATCAGGATCAAGATCAGCTTTGCACTGCCATGGATGTCGAAGACAACTTCAACAGGACCCTCCATAACCCCAAAGAAGAGGACCAAGAAGATGATGTTCATCACAGTGTCACTGTTGCACTGCACATAGGGTTGCCAAGCCCTAGCGCTGCTGAGATTGCTTCTGTGCTGTCTTCGGCTTGTGCCACAGACAAAGAGCAACGACAAGGAGGAGGAGGAGATTGTGATAATAATGGGATTGATGATTCTTCTTCAGGGTTCTTGTCGAACAGGCTCAACAAGGGACAGTACTGGATTCCTACCCCTTCTCAGATTCTCATTGGACCTACACAGTTCTCTTGTCCTGTTTGTTGCAAAACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAGTACAGAAAAGGGCCTGAATCTCTGAGGGGTACCCAACCAACAGGTATGCTTAGGCTTCCATGCTATTGTTGTTCCCCAGGATGCAGGAACAACATTGATCACCCAAGAGCAAAGCCCCTTAAAGATTTCAGAACTCTTCAAACACACTACAAGAGGAAGCATGGGATTAAGCCCTTCATGTGTAGAAAATGTGGTAAGGCTTTTGCAGTGAGAGGCGATTGGAGAACCCATGAAAAGAACTGTGGGAAGCTTTGGTACTGCATCTGTGGCTCTGATTTCAAGCACAAGAGGTCTCTTAAAGATCACATCAAAGCTTTTGGAAGTGGCCATGCAGCTTATGGGATCGATGGCTTTGAAGAAGAAGAAGAGCCTGCATCTGAAGTAGAACAAGACAATGACTAA


Promoter Sequence:
>Vu_28873::LG8:15444816-15446816(+)
TTATGATTGCAAATTAAAAATCAAAACTTAATTACTCATTTAATTCCCAGTTTAGTTACAAAGTTTAAGTCACTCTCTACTTAACTTTTTGTTTCAATTAAATCCTAGGTCAGTTTGTGAATTGAAAGTAGAAAAATGATGGATGATTCCATGGTTTTAAAAAAATTCTAAGAGAATTTTCATTTGAAATTCATCCCAAGAATAAACCTTTTTCATTTTGAATGTTTTTTTTTAAATTTTCAAAAGACTTGAAAGATTTATCTAGTAGTTCAAGAACTTAACCAATGTTCATATTTGTCAGTATTATATCTTTATCATTTAAAGACTAAATTCTTACAAGTTCACAAAAGTCCAAAGTGTATTAGCCTAAGATGTCTTTGAGTTGAAATATCATTTTTTATTTTATTTTATAAGAACTCTTTACTTTTGCTTGTGTTTTACAAATATCTGACAAAGAAGTTCATCTTTAAATGACATCTTACAAAATTAATTATATGCATCTTTGAAAATAATTTAAAACTAGCATGTCTACACCTTATGTGCCAAAACCAATGATCCTCTTTTACCATCATAAGACTAGATAACCTATGAGCTAATAAGTTATTATATCAATTTTATAAAAATCTCTCTGTTTATTTGTAGTAAACAATTTAATTCTATTATTGTTGATTATCCATTGTTCTTTGTTAAAAATATATAACATTACAATTATTATAAACAATTTACTTATATGCTCAATAAATACTTTTAGATATACTAAAACGATATATTTATAGAAAAATTTCTATATTTGTTCTTCTATTCTTTGTTATTTTCTCTCCTTCGAACATTACTCTAAGAGTACAAGTTCAAATACAACTGATGAATAGCAAAAATACAAACTAGAAATGGGAATTATTTATATAACTTATACGAACAATAAAAGTACAGTATTACACTTCTTTTCTCTCTATATATATTTAAAGAAAAGAGAGGTTAGACAAAATCAAAATCACAAAACTCAAATGATAAATGTATCCATCTAATGGTAGTGATAGTTATTGTATGTTAGATAAATAAGATTTAATAATGAACTTGGTTTATTCAAAAGGTCTTTTGAAAAAAAATATATATGAAAATTCAAAAAAGTATTATAAGTTAATCAAATAGATTTTAGTATGATTTGCTAGAATGATTTCTGAAAAAACATTTCCTTAGTGATTTGTCTCCTATTTAACAGACAAGATAACTTTATCATTGCATTAGTTATAAAAATCATACGTAAAAGTAATTTATAAATATTCTTTGTCTTTAACCATGGCTTTTTAAAGATTGAATTATTATGAGTTCTATGAAATCACCACGACATGACCTAAAATGCACAGATAAATTTGACTGCATATATATAATACAAAATTTTGGTATATTATGCTTAATTATCCCACTTTACTCATACATTACCAATTTTACTTAATGTGTGGGAATTTTTACTTTTATTATTTACCACTTTGCAAATTACGATATGATCCTCCATCATATAGCATTTTCTTGAAAAAGAAAAAATATTTATGATCAGAACTTATTATATAAGTTTGGCTAAAGTCGTCCGAGGAAGAGAAATCCAAAAGCTGAGAGGATCACTGCACAACCTTGATCACAGTTTTGACGTAAATCAGTAAAAAATAACTTGAACTTAATTGAATAATTTTCCATAACCATAAACTGCCACTAACGGTATTCTTTGTCAAAAGAAGATTAGAATAAAAAAAATAAAAAAATAAAGAATAAATATGAAAATGTGATTAAGAATAATTATTTTGTTGATAATTTGGTGAGTTAATTTTCTCCTCCACTTGACTTTACTTGTTTTGTTTTCCCCATATATCTCTTTCTCTCTCTCCACCATCCACTTCCTTCAGCCATCTTGTACTTTCTGTATGTATCTGTATATAAAAGCAAACCTACATAGCCTTCTACTGTTCCCACTCTCTCCTCAAACACAAACCTTTTTCCATCCACCA


Gene Sequence:
>Vu_28873(+)
ATGGCAGACCCTTACTCCAATTTCTTCTCACCACCTTTCTTCCACTACCCTTCTCCAAACCCTTCCACCCACCACCATCATCCATATCCTCACAACTTCATCAACCAAACCACCACCACCAACATCACCCACAACACCTTTTTCCACTTCCAACATCACCACCACTTTCAAACCACTACCACCACCTCTTTTTCTTCTTCTTCACCCCCTTCTCCTCCCTTGAGAGAGGCCCTTCCTCTTCTCACCCTCAGCCCAAAAAATTATGACCAACGGGAGGAGCACTACCAGGATCAGGATCAAGATCAGCTTTGCACTGCCATGGATGTCGAAGACAACTTCAACAGGACCCTCCATAACCCCAAAGAAGAGGACCAAGAAGATGATGTTCATCACAGTGTCACTGTTGCACTGCACATAGGGTTGCCAAGCCCTAGCGCTGCTGAGATTGCTTCTGTGCTGTCTTCGGCTTGTGCCACAGACAAAGAGCAACGACAAGGAGGAGGAGGAGATTGTGATAATAATGGGATTGATGATTCTTCTTCAGGGTTCTTGTCGAACAGGCTCAACAAGGGACAGTACTGGATTCCTACCCCTTCTCAGATTCTCATTGGACCTACACAGTTCTCTTGTCCTGTTTGTTGCAAAACCTTCAACAGATACAACAACATGCAGGTCAGTAATAACATAACAAATCATTTTATCATAACAGATGTTAAAGAATGAACACCCTACTTCTATTTCTACCATTTTTTTTTCTTCCAATTCGTATGAGAAAGACCACATACACACAACACCATGAATTTGTTAATTTGGATATATAGGACTGATAGGAAAACACCTTCCTTTTCTTTCTTTCTTTTTTCCTTTATCTTTCTTCTTCTCCTTCCATTTTTCATCTCTTTCTTTTCCCTCGAGGTTCATTTTTTTTTAAATTGTACTTGTGTCATCATTATGATAAAAATTACTTTCAGCTTTTTTGTTTTCCTGCACGGTGGAACGGTACTGATGTATTATTAATATTTTCCTGGTTCAAACTGTGACTGAGATCAGATATGCCATATCCTTTTCGTTGATTAAACTACTCGGCCAATGTTCTTTATGTCTTGGTGCATTGAAGTGTGTGCTTAGTATGTGTTTGGCATGCCTTGGTATATCTTTGGCATGCAGCTGCGAATAGAACTGAAAATTTGCAGTGTTTCTTCCAGATCTCTCAGATAATGATATCAATACATCTCTTAGATTTGTTTCTCTTTGCAGTCCTTTTCTGTCTGAATTCAAACACCTTCAATACCTTAAAGTCTCACACACAGATATAGCTATTAATTAGTCTTCCTTCTCTCTCTCTCACCTGAATGAGACCTCCTTTTGCTTTTTTTAATTCGATTTGAGTGTCCTAGAACTAAATAATTAATATGATCGCCTATATTCAGAGAAAAAAAGATGTAAGTGTTTTCTAAGTCAGCTTAATCTAAAATTCAAACTAGTAAAGTTTAACCAGCTTTTGTTTTTCATTTTTCATTTAATGTTTAATTTTTCACTAAATGTAACGAAAGAATGCAGCTTTTGATCATGTTTGCCTAGTTTTCTCTATCCTAGTTATCTTCTTTTTGCGGTATCCATAATTTTTTTTTTCTTTTGTTTCTTTTGTCAGATGCATATGTGGGGGCATGGATCACAGTACAGAAAAGGGCCTGAATCTCTGAGGGGTACCCAACCAACAGGTATGCTTAGGCTTCCATGCTATTGTTGTTCCCCAGGATGCAGGAACAACATTGATCACCCAAGAGCAAAGCCCCTTAAAGATTTCAGAACTCTTCAAACACACTACAAGAGGAAGCATGGGATTAAGCCCTTCATGTGTAGAAAATGTGGTAAGGCTTTTGCAGTGAGAGGCGATTGGAGAACCCATGAAAAGAACTGTGGGAAGCTTTGGTACTGCATCTGTGGCTCTGATTTCAAGCACAAGAGGTCTCTTAAAGATCACATCAAAGCTTTTGGAAGTGGCCATGCAGCTTATGGGATCGATGGCTTTGAAGAAGAAGAAGAGCCTGCATCTGAAGTAGAACAAGACAATGACTAA