Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28863 LG8 15305940 15308492 PREDICTED: disease resistance protein RGA2-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 15305960 synonymous_variant p.Val7Val
G/A 15305963 synonymous_variant p.Ala8Ala
C/T 15305988 missense_variant p.Leu17Phe
T/G 15306071 synonymous_variant p.Leu44Leu
T/C 15306084 synonymous_variant p.Leu49Leu
A/C 15306146 synonymous_variant p.Ile69Ile
T/C 15306158 synonymous_variant p.Phe73Phe
G/A 15306200 synonymous_variant p.Val87Val
T/G 15306209 missense_variant p.Asn90Lys
T/C 15306227 synonymous_variant p.His96His
G/A 15306381 missense_variant p.Asp148Asn
A/G 15306492 missense_variant p.Asn185Asp
G/T 15306547 missense_variant p.Gly203Val
A/G 15306801 upstream_gene_variant
A/T 15306909 upstream_gene_variant
A/G,* 15306929 upstream_gene_variant
G/T 15306933 upstream_gene_variant
A/G 15306995 splice_acceptor_variant&intron_variant
A/T 15307018 synonymous_variant p.Gly272Gly
C/T 15307103 missense_variant p.Pro301Ser
G/A 15307118 missense_variant p.Glu306Lys
G/C 15307326 stop_lost p.Ter375Serext*?
G/T 15307431 stop_lost p.Ter410Leuext*?
T/C 15307433 missense_variant p.Phe411Leu
G/A 15307501 synonymous_variant p.Lys433Lys
G/T 15307571 missense_variant p.Gly457Trp
C/T 15307652 upstream_gene_variant
A/G 15307808 upstream_gene_variant
G/C 15307930 upstream_gene_variant
C/A 15308280 synonymous_variant p.Gly540Gly
T/C 15308331 synonymous_variant p.Gly557Gly
G/A 15308333 stop_retained_variant p.Ter558Ter
A/C 15308363 missense_variant p.Tyr568Ser
C/T 15308456 missense_variant p.Thr599Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28863.1
MAESLIVAVAESLITKLASRAVEQASLALGVYQELQQMKKTMALVKAFLLDAEQKKQQNNALSEWLRQIRQVFAHAEDIVDNFECEVLRNHVVSSHGSFCRKVCRLFSTSNPVVYRYRMGREIKDIKKQLEKVATDGHMFGLQSSDKDTKVLNAREMTHSHVNVSNVVGREHDKQKIIELLLQDNHHDRSLSVISIVGFGGLGKTTLAKVVFNDTSIEECFTLKMWVCVSNDFELRNVLIKILNSAPNPTNEKFKNLDTDQLQIRKNHPELMEIGRQIVRKCGGIPLAVRTLGSSLFSRVDRKEWENIRDNEIWNLKQNENDILPALELSYDQLPSHLKRCFACFSLASKDFDVSSSYVALLWEALGFLSPPKQNETTHDVANEYLRELWSRSFLTDFLDMGSTCRFKLHDLVRDLAVYVAKGEFQILYPHSTSISEHAQHLSFIENDMLGQDLVPMGARTIIFPMEATNDAFLNTLVSSKMELSMGLSNLNSIPDSRLKLLVLQSLPQLVTLPEWLQGSVNTLHSLLLVDCNNLEELPEWLSTLTSLKLLIIEHCPRLISLPDSTHHLRNLEHLEINDCPELCKRCQPGVGLDWHKISHIKEVIIGEPEE*


CDS Sequence:
>Vu_28863.1
ATGGCCGAATCACTCATTGTCGCGGTTGCAGAATCACTTATAACGAAGCTCGCTTCTCGAGCTGTCGAACAAGCTTCTTTGGCGTTGGGTGTGTACCAAGAGCTACAGCAGATGAAAAAGACCATGGCACTTGTCAAAGCATTCTTGTTAGACGCTGAGCAAAAGAAGCAGCAGAACAATGCCCTGAGTGAGTGGCTAAGACAGATAAGGCAGGTGTTTGCCCACGCGGAAGACATAGTCGACAACTTTGAATGCGAAGTGTTGCGGAATCACGTTGTCAGCTCTCATGGCAGCTTCTGCAGGAAGGTATGTCGTTTGTTTTCAACTAGTAATCCTGTGGTTTACCGTTACAGAATGGGGCGTGAGATAAAAGACATCAAGAAGCAGTTAGAGAAGGTTGCAACTGATGGCCACATGTTTGGTCTTCAAAGCAGTGACAAGGATACAAAGGTTTTGAATGCGAGGGAAATGACTCATTCACATGTGAATGTCTCAAATGTGGTAGGAAGAGAACATGATAAGCAGAAGATAATAGAGCTTTTGCTGCAAGATAATCATCATGACAGAAGTCTCTCAGTGATTTCCATTGTGGGATTTGGAGGCTTGGGAAAGACCACTCTCGCAAAGGTAGTGTTCAATGACACTAGCATTGAGGAATGTTTCACTTTGAAGATGTGGGTGTGTGTCTCTAATGATTTCGAACTTAGGAATGTGCTTATTAAAATCCTAAACTCTGCTCCTAACCCCACCAATGAGAAGTTCAAAAATTTAGACACGGATCAACTTCAAATTCGAAAAAACCATCCAGAGTTAATGGAGATTGGGAGACAAATTGTGAGAAAATGTGGAGGAATACCATTGGCGGTGAGAACCTTAGGAAGCTCACTGTTCTCAAGGGTGGACCGAAAAGAGTGGGAGAATATAAGAGACAATGAAATTTGGAACTTAAAACAAAATGAAAATGATATTTTGCCTGCTCTTGAGTTAAGTTATGATCAACTACCTTCGCATTTGAAACGATGTTTTGCTTGCTTTTCTCTTGCCTCGAAGGACTTTGATGTTTCTAGTTCTTACGTTGCTCTGCTGTGGGAGGCACTTGGTTTTCTTTCCCCACCAAAGCAAAATGAAACAACACATGATGTTGCTAATGAATATTTGCGTGAGCTATGGTCAAGATCTTTTCTCACAGATTTTCTTGACATGGGGAGCACATGCAGATTTAAATTACATGATTTAGTCCGTGATCTTGCAGTGTACGTAGCCAAAGGTGAGTTTCAAATATTGTATCCCCACAGTACAAGTATATCTGAGCATGCCCAACACTTGTCATTCATTGAAAATGATATGCTTGGCCAAGATCTCGTTCCCATGGGTGCAAGAACTATAATTTTTCCCATGGAAGCTACTAATGATGCTTTCTTGAATACGTTGGTATCCAGTAAGATGGAATTGTCAATGGGCCTTAGCAACCTTAATTCCATTCCTGATTCAAGGTTAAAATTACTTGTTCTTCAAAGTTTGCCACAGTTGGTCACTTTGCCTGAGTGGTTGCAAGGATCTGTGAACACACTGCATTCCTTGTTACTTGTTGACTGCAACAATCTTGAGGAGCTTCCTGAGTGGCTGTCAACTTTGACCTCTCTCAAACTACTTATAATTGAACATTGTCCAAGGTTGATCTCACTCCCTGATAGCACGCATCACCTACGAAACCTTGAACATTTGGAAATCAATGATTGTCCTGAATTATGCAAAAGATGTCAGCCAGGAGTTGGACTGGATTGGCACAAAATATCCCACATCAAAGAAGTTATCATTGGTGAACCAGAAGAGTAG


Promoter Sequence:
>Vu_28863::LG8:15303940-15305940(+)
TAATCAGGGAGATAATGTGCACACAATGAAGTACAAGTTGGCCATACACAAAGCGACCAAGACAACCATTTTGAAAGGAAAGAGCAAGTCCCATAGTTAATAAGAAGTCAGCCAAAAGCATTTGAGAAGTAGGCCAAAGCAATGGAGAAGTCGACCACGAGGAGTCGACAAATGAAAAAAATAAGTCTGAATGTAGGAAAGAATGATGAAAGTCACGAGAAACATTTAAGTTTAGAGGAGAGTTTTATTAACTAAACTTAAATATAATCGAATTAAATGGGTTGTTTATTTGCTTAAGAGTTGTCAGTTTTAGAATGCAAGAGTCAACAGGGCATTGTAGTGATTATTAGACAATAATAAGAAATAATTGTGTCTTAATAATATATTTTATGGTTTTAGAGAAGAGAAGCCAAGATAAGTCCATAAATTGAAAGTGTCTAGTTGACACACAACATAATACCAAAAGCACATTAAAAAATTTATTAATGAGTGTCATTTTCCTACCAATCTACCATATCATCTCTACTATCAAGAGTAGCTAACATAAGATTCTTCAAATAGATGAACTGGAAAATAATCTTCAAATCACAACATTTAGGTAAAATTTAAACTGGGCAGAAATAAAATCAAATGTCAACTCAATAACTCACCTCCATTGCAGGTTCACAACTCCTGAATTATGTCTCTACTTCTATTTTCCCGCAAGTCTTGAGCAGACAACTTAGTGAAACCTCACAAATAAAACCTTCTCCAATTAAAATGTGAAGTGATAGGAACAAGTTAGAGAAACCAATATATATTAATTAATATTATATATCAATTAAACTTTGGAATAGGATACAAACTGGTTTTCATTCTAGGTATATCTTTGTAGGCATATATTGAAATTCATTAACATTTTAATTAAACCATGTTAGTTTTTTCTGTGTGTGATTCTTTTTTATCCTTGCTTGTGACTTTCAAGTCGTTCTTTTAGGGAGTTTTTTCTATTGTCATTTCTTTATTTGTCTTCATTTGTATGGTTTATTCGTTTGTATGCTAGATGGTATCAGGTTTGTTTGTTTGAGCTATTTCCATTACAAAAATGGAATAGGAATTTATTTTATAGAATCTACATTGACAAAGTTAGTTTTTGTTAAGTGCGTATTCATGAAATTCTATATTGAATGTATAAAAAAAAATGAGAAGTTGATTTGAGGAATTATATATGTCGTGGATGAAAAACTTAATTGAGTTTGTTTTGGCTCGTTGACCTGGTTGGCATACCATAGCCCCTCATCATCCAATATAATTGCAGTAAAAGGGTTTTAAAACAAAATTGTACATAAAAATTAACAGTGAATATATTTATATATGATTGATTCTAACACCCCAACCACCAATCTACTAGACTACAAAAATCATTATTGGGGTATTTTATCCAATTAAATACATGAGTACAAGTAGGAAGTGCATAAAAAAATTATTATGTGGCGTCATATTTGGCCCCATTTTATAAACAGTATTGTTTTGTTTACTGACGAATTGGTTTTGTATTACAAAGACTCCATATTTCTCTTGAAATCATCGACAATATAGTACAGTGGACATCTTGTCTTTGAGAAATTTCATGAAACCCAAAGATACATAGTAACAACAAAATTACAAACTTTCATTTGGGTTGAACATATGTAGTGTCTTCAACATAATATCTGTCTTTCTATGATGCTATCTCAACCTTACAAAGATGCATGTAATAAAGTACCTTGTTGACTTTTCTTAAATCAACTGGTTCAACTCAAAACCATCGAATAAATAATTATTTTCATCGCCAAGGTAAAAAAAATAGGTATATGTAACATCACCCCATCAATTTTTGTCTTCAAAATAGAGTTTTCCTACGTGAAGAGCTCTCCAATATTGACTAGACTTTTCACAGATAAATATCATAATGACAAGATAAGATTCAGAGAAAAAACCATTCCTGAGGTTGTCACTGAATTCTTGTCTGCCTGAAGTCA


Gene Sequence:
>Vu_28863(+)
ATGGCCGAATCACTCATTGTCGCGGTTGCAGAATCACTTATAACGAAGCTCGCTTCTCGAGCTGTCGAACAAGCTTCTTTGGCGTTGGGTGTGTACCAAGAGCTACAGCAGATGAAAAAGACCATGGCACTTGTCAAAGCATTCTTGTTAGACGCTGAGCAAAAGAAGCAGCAGAACAATGCCCTGAGTGAGTGGCTAAGACAGATAAGGCAGGTGTTTGCCCACGCGGAAGACATAGTCGACAACTTTGAATGCGAAGTGTTGCGGAATCACGTTGTCAGCTCTCATGGCAGCTTCTGCAGGAAGGTATGTCGTTTGTTTTCAACTAGTAATCCTGTGGTTTACCGTTACAGAATGGGGCGTGAGATAAAAGACATCAAGAAGCAGTTAGAGAAGGTTGCAACTGATGGCCACATGTTTGGTCTTCAAAGCAGTGACAAGGATACAAAGGTTTTGAATGCGAGGGAAATGACTCATTCACATGTGAATGTCTCAAATGTGGTAGGAAGAGAACATGATAAGCAGAAGATAATAGAGCTTTTGCTGCAAGATAATCATCATGACAGAAGTCTCTCAGTGATTTCCATTGTGGGATTTGGAGGCTTGGGAAAGACCACTCTCGCAAAGGTAGTGTTCAATGACACTAGCATTGAGGAATGTTTCACTTTGAAGATGTGGGTGTGTGTCTCTAATGATTTCGAACTTAGGAATGTGCTTATTAAAATCCTAAACTCTGCTCCTAACCCCACCAATGAGAAGTTCAAAAATTTAGACACGGATCAACTTCAAATTCGTTTGAGAAGTAGCCTTCAAAGTGAGAAGTTCTTGCTCGTCTTAGACGATGTGTGGAACGAGAATCGTATTAAATGGGATGAGTTGAAGGAAATCATAGAGATGGTAGGTAACAAAGGAAGTAAAATCTTGGTGACTACTCGTAGTCACTCAATAGATGCCATGATGCGCACTAAAACCTCTAACTCTTACATTCTAAAAGGCCTTTCTGAGGAGGATTCCATGTCTCTGTTTGTCAAATCTGCTTTTGATGATGGAGAAGGAAAAAACCATCCAGAGTTAATGGAGATTGGGAGACAAATTGTGAGAAAATGTGGAGGAATACCATTGGCGGTGAGAACCTTAGGAAGCTCACTGTTCTCAAGGGTGGACCGAAAAGAGTGGGAGAATATAAGAGACAATGAAATTTGGAACTTAAAACAAAATGAAAATGATATTTTGCCTGCTCTTGAGTTAAGTTATGATCAACTACCTTCGCATTTGAAACGATGTTTTGCTTGCTTTTCTCTTGCCTCGAAGGACTTTGATGTTTCTAGTTCTTACGTTGCTCTGCTGTGGGAGGCACTTGGTTTTCTTTCCCCACCAAAGCAAAATGAAACAACACATGATGTTGCTAATGAATATTTGCGTGAGCTATGGTCAAGATCTTTTCTCACAGATTTTCTTGACATGGGGAGCACATGCAGATTTAAATTACATGATTTAGTCCGTGATCTTGCAGTGTACGTAGCCAAAGGTGAGTTTCAAATATTGTATCCCCACAGTACAAGTATATCTGAGCATGCCCAACACTTGTCATTCATTGAAAATGATATGCTTGGCCAAGATCTCGTTCCCATGGGTGCAAGAACTATAATTTTTCCCATGGAAGCTACTAATGATGCTTTCTTGAATACGTTGGTATCCAGGTGCAAATACCTCAGAGTTCTAGACTTGAGTTATTCTGAATACGAGAGTTTGCCTAGCTGCATTGGAAAGTTGAAACATTTAAGATATCTCAATCTTTCAGGTAATAAAAAACTTAAGGGACTCCCAGATTCCTTATGCAAACTCCAAAATTTGCAAACTTTGGACCTAAGAGGTTGCATAAAGCTGCAAAATCTGCCCAAAGGAATAAGAAAGTTAGTCAGCCTTCGTCGGCTGCTTGTAACCACTAGGCAACCAGATTTTCCAGACAAAGAGATTTCAAAATTGGCTTGTATAGAAACAGTAGAACTCTATTCTTGTGATAATTTGGAGTCATTGTTCCAAGCTATACAACCTAGAAGTCTTAAGTTTTTGCATCTTTCTGGTTGTGGGGGTTTAAAGTCTCTGTCCTTTCATGTCATTACAAATTTAGAGAGTTTGGTTATCTTCAAATGCAGTAAGATGGAATTGTCAATGGGCCTTAGCAACCTTAATTCCATTCCTGATTCAAGGTTAAAATTACTTGTTCTTCAAAGTTTGCCACAGTTGGTCACTTTGCCTGAGTGGTTGCAAGGATCTGTGAACACACTGCATTCCTTGTTACTTGTTGACTGCAACAATCTTGAGGAGCTTCCTGAGTGGCTGTCAACTTTGACCTCTCTCAAACTACTTATAATTGAACATTGTCCAAGGTTGATCTCACTCCCTGATAGCACGCATCACCTACGAAACCTTGAACATTTGGAAATCAATGATTGTCCTGAATTATGCAAAAGATGTCAGCCAGGAGTTGGACTGGATTGGCACAAAATATCCCACATCAAAGAAGTTATCATTGGTGAACCAGAAGAGTAG