Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28854 LG8 15157141 15160270 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of reproductive process, flower development, cellular response to organic substance, defense response to bacterium, cellular response to organic substance, protein phosphorylation, meristem development, protein phosphorylation, indole-containing compound metabolic process, defense response to bacterium, signal transduction, negative regulation of transcription, DNA-templated, recognition of pollen, recognition of pollen, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, protein phosphorylation, recognition of pollen, recognition of pollen, defense response to bacterium, negative regulation of transcription, DNA-templated, response to chitin, indole-containing compound metabolic process, regulation of multicellular organismal development
Cellular Component   located in   extracellular region
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, calmodulin binding, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
T/A 15157400 3_prime_UTR_variant
T/C 15157435 3_prime_UTR_variant
A/T 15157537 synonymous_variant p.Val737Val
C/T 15157670 missense_variant p.Arg693Lys
A/G 15157691 missense_variant p.Val686Ala
A/G 15158181 synonymous_variant p.Leu523Leu
G/C 15158277 missense_variant p.Leu491Val
G/A 15158305 synonymous_variant p.Ile481Ile
T/C 15158363 missense_variant p.Asn462Ser
G/A,* 15158459 missense_variant p.Pro430Leu
G/T 15158460 missense_variant p.Pro430Thr
C/T 15158580 missense_variant p.Gly390Arg
T/A 15158747 missense_variant p.Asn334Ile
A/G 15158752 synonymous_variant p.Gly332Gly
A/G 15158764 synonymous_variant p.Asp328Asp
G/C 15158945 missense_variant p.Ser268Trp
A/T 15158949 missense_variant p.Tyr267Asn
G/C 15159101 missense_variant p.Ala216Gly
T/C 15159251 missense_variant p.Asn166Ser
G/C 15159281 missense_variant p.Thr156Ser
T/A 15159285 missense_variant p.Arg155Trp
C/G 15159294 missense_variant p.Glu152Gln
T/G 15159370 missense_variant p.Lys126Asn
C/T 15159380 missense_variant p.Gly123Glu
A/G 15159382 synonymous_variant p.Pro122Pro
G/A 15159392 missense_variant p.Ala119Val
G/T 15159409 synonymous_variant p.Ser113Ser
C/T 15159429 missense_variant p.Glu107Lys
A/C 15159466 synonymous_variant p.Val94Val
A/G 15159619 synonymous_variant p.Asp43Asp
A/G 15159680 missense_variant p.Met23Thr
A/C 15159833 5_prime_UTR_variant
G/A 15159948 5_prime_UTR_variant
G/A 15159952 5_prime_UTR_premature_start_codon_gain_variant
C/G 15160179 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28854.1
MLGQGNCLLRSPFLLCILIGLLMHSVVGAEIPLGSKLSVVDNDYWVSSNGDFAIGFFNISDQPNQFSVGIRFNSKSIPYSRQTVVWVAGGDVTVGNESYFELTHEGELVLFDSLHEAFAWTPGTGKRSVASASLLDNGNLVLMDKEQHIIWESFRTPSDTLLPGQNLFANEKLRAASAIKNSKSSYYSLHMNASGHLELHWESDVIYWTSENPSSASNLSAFLTTNGALELRDRRSKAVWSAFGQDHNDSVNYRYLRLDVDGNLRLYSWVESLGLWRSVWQAVENQCKVFATCGELGVCVFNASGSAECKCPFQVSAGNKCLVPFERDCASGTNMIAYKNTYLYAFYPPDNSVITSNLQHCEQLCLNDPHCTAATFSNDRTPLCSIKKTGYVTGYSDPSVSSISFAKRCSGPIAVNPSFTKSPPSEPPPPLCVPCLMGAATGTFFIIVILQLGIMFIYRRKNSTRQKATLGFIGTNSKGLIVLSFSEIKTLTGDFKNQIGPKVFKGLLPNNLPIALKDLNATLEERKFRSAVMKMGCIHHKNLVKLEGYCCEFDHRFLVYEYCKKGSLDKYIDDPALCKMLTWRKRVEICSSMAKAICYLHSGCREFISHGNLKCENVMLDENLVAKVSEFGFAIADGKATYCGFSAEKDVEDFGKVVLALLTGCRDHEHVELCGWAYKEWMEERVVNVIDRRMEGGYNSEELERVLRIAFWCLQMDERRRPSMGEVVRVIDGTLSVDPPPPPFAFQRPLQVDDSEENVSEFEV*


CDS Sequence:
>Vu_28854.1
ATGCTTGGACAAGGGAATTGTCTCCTTAGATCACCATTCTTGCTATGTATACTCATTGGCCTCTTGATGCATTCTGTTGTGGGTGCTGAGATTCCCTTGGGTTCTAAACTTTCTGTGGTTGACAATGATTATTGGGTTTCCTCCAATGGTGATTTTGCAATTGGATTCTTCAACATTTCAGATCAACCCAACCAGTTTAGTGTTGGAATTAGATTCAATTCCAAGTCTATACCTTATAGTCGACAAACTGTGGTTTGGGTTGCTGGGGGTGATGTCACAGTTGGTAACGAGTCCTACTTTGAACTCACTCATGAAGGGGAACTGGTCCTGTTTGATTCCTTGCATGAAGCTTTTGCTTGGACCCCTGGAACGGGTAAACGATCTGTTGCATCAGCTTCACTCCTTGACAATGGAAATCTTGTTCTAATGGACAAAGAGCAACACATCATTTGGGAAAGTTTTAGGACTCCATCTGATACTCTTCTCCCAGGACAAAATTTATTCGCTAATGAAAAGCTTCGTGCAGCATCTGCAATCAAGAATAGCAAGTCTAGTTACTATAGTCTTCACATGAATGCTTCTGGGCATTTGGAGCTACATTGGGAAAGTGATGTTATCTACTGGACAAGTGAAAACCCTTCTTCTGCTTCGAATCTCAGTGCTTTCCTTACAACAAATGGAGCTCTAGAACTTCGAGACCGAAGGTCAAAAGCTGTTTGGTCTGCATTTGGACAGGATCACAATGATTCGGTGAATTATAGATATCTTCGGCTGGATGTGGATGGAAATCTTCGCCTATATTCGTGGGTTGAAAGTTTGGGATTGTGGAGATCGGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTGAACTTGGTGTCTGTGTCTTCAATGCCTCAGGTTCTGCTGAATGCAAATGCCCGTTTCAGGTATCTGCGGGTAACAAATGTTTGGTTCCATTTGAACGAGATTGTGCATCTGGTACCAATATGATAGCATACAAGAACACATATTTATATGCATTCTACCCTCCTGATAATTCTGTTATCACAAGTAATTTGCAGCATTGTGAACAGTTGTGTCTGAATGATCCACACTGTACAGCTGCAACATTTTCCAATGACAGAACTCCGCTATGTTCAATAAAGAAAACTGGGTACGTCACTGGCTATTCAGATCCATCTGTAAGCTCAATATCATTTGCCAAGAGATGTTCAGGTCCAATTGCTGTAAACCCAAGTTTCACAAAATCTCCTCCATCTGAACCACCTCCTCCTCTCTGTGTTCCTTGCCTAATGGGGGCTGCCACAGGCACATTTTTCATCATTGTTATTCTCCAGTTGGGAATTATGTTCATCTACAGAAGAAAAAACTCTACCAGGCAAAAGGCCACTTTAGGTTTCATTGGCACAAACTCAAAGGGTTTAATCGTGTTGTCCTTCTCAGAAATCAAGACCCTCACAGGGGACTTCAAGAATCAAATTGGGCCAAAGGTGTTCAAGGGTTTGCTACCGAACAACCTCCCGATTGCACTCAAAGACCTGAACGCAACCTTGGAAGAAAGGAAGTTTCGGAGTGCTGTTATGAAGATGGGTTGCATCCACCACAAGAACCTTGTGAAACTGGAGGGTTATTGTTGTGAGTTTGATCACAGGTTTTTGGTGTATGAATATTGCAAAAAGGGTTCACTGGACAAGTACATAGATGATCCTGCACTATGCAAGATGCTAACATGGAGAAAGAGAGTTGAGATATGCTCAAGTATGGCAAAAGCCATATGTTATTTGCACTCCGGGTGCAGGGAGTTCATCAGCCATGGAAATTTGAAATGTGAAAACGTTATGTTGGATGAAAACTTGGTGGCGAAGGTGAGTGAATTTGGGTTTGCTATTGCAGATGGGAAGGCAACATATTGTGGCTTTTCAGCTGAGAAGGATGTAGAGGATTTTGGCAAGGTAGTTTTAGCCTTGCTAACCGGGTGCCGTGATCATGAACATGTTGAACTTTGTGGGTGGGCGTATAAAGAATGGATGGAAGAGAGGGTGGTGAATGTGATTGATAGAAGAATGGAAGGAGGTTATAATTCAGAGGAACTGGAGCGTGTGTTGAGAATTGCATTTTGGTGCCTTCAAATGGATGAACGTAGAAGACCTTCCATGGGGGAGGTAGTAAGAGTTATTGATGGAACATTGAGTGTTGATCCTCCACCACCTCCTTTTGCGTTTCAGAGGCCATTGCAGGTAGATGATTCAGAAGAAAATGTTTCAGAGTTTGAAGTGTAG


Promoter Sequence:
>Vu_28854::LG8:15160270-15162270(-)
TTAAATACCTATTTTTGACACATCAACATCGTCGTCGCCTAATTCCATCTCAGCACCACTGAACACTATCAATAAAAGTGCAAACCACTAGCCTTTTTTAAACTGGATCTTAAAGTTAGTTTCCTCTACTCTACTCAGTGCAAGTTCTTTCGCATAAATTGGCACTAGTGCCACTTTTCCACCATCCAACACTACCTGTGCAAGGGTTGGTGGTGCTCAGCTCTAGGCAGTTTGATAACACTATGTAATTGAAGCGCTGGACATGATCCTTATGACGTTCAATGCGGGGTATTTGCTTCAAATTGATTTTTTTTGTCCAAAACATGATTCCTTATGTTTTTGCTTGTTTTCCTCAACTATAATTGTTTTCTATTTATTTATTTCACACTGTTAGACAAATATATTATAAGTAAAAAATCATCAACAACTAAAATACAAAACAATACAAAACACACCAAACTTAAGAATAAAACAAGATAAAAATTAGGATAGAGTTTATTTATTTATGATAATAGACACACAAAAATAAGTAAAAATGAACGTTATCAATAGGATGGTAAAAAATTAATCTCATCTTAAATTATTTAATCTATAGGTTTATTTTATTGCTCTAGATGGAATTTGAATGTGAAGAAAAAGAAATGAGGAAAGATCTTGGAGAAGAAAAACTGCTAACTATTGACATAAAACATAACTAAAGGAAGTATCATAACTCCTAATGCTACAACAAACATCTACTTCAACTAACAATAGGTTGCTAAAGTGTATAATCATTGTCTTTAATGGAATTTACATTGTCTAAAGTTTTTACAATCTTTTTGAACCTGAGCCAGTTTTTAATATGTTAATATGCACAATCTAAAAGCATCGTCAGCATTGTAGCAACACCTGAAATATTTTTTGAATTTAATTCTTAAAAAAAAAACAACAAAGTTAAATATTTTTATTATTTCTTTTAACTCTTATTAATTTAATATCAATATAACTTTAAAAATGATTAATTTTAATTAATATGATTAAACATTAAAAGAAAATCATTAATAACGAATTATAGAGACCACAATAATTAGTTAATATATTAACTAAAATACCATTTTATAAACTAAATGTTTTTGTATCTAAAATATTTTTTATTATAAATAAAAATTATAGTTAATTTATAAATTAGAATCTAAATCAATCTCTATCACTATCTACCATATATGTATATATTATTATTGATTATAAAGTCTCTCATTTTAAATTAAAGACTAATTTAGATACTATATTTTTTATAGCTAAAATCTTATAGCTAATATTAGATATTAATTTAGATTTTAATTAACAAATTAATTATAATTTTTTATTCATGATTAAAATTGTTATAGATATAAATAATTTTTAATTTATAAAATAGTATCTAATTTAGTCAATATATAATTAATTATTTTTTGTCTTTCAAATTAGTTGCTATTTAATAATTTTTTGTGTGATAAAAATAATGAAGAGTATTTTAAATTAAAATCCTTAAACTATTTTTAAATGTTGAACTCAGTTAAGTAATGCATTTATAGATTTTATATAAGTGGTATAAATAATTAAAATTATATTTAGAGAAACTTAAAACATATTTAAATTATTTTTCAACGCGGTTTTATTAATTAAAAATTATAAAAACGTAAGTAGAACTGGTAAATAAAAAATAATAAATTTAATGTAAAAATAATAAACGTTAAAAATTGTGTGACTTTCATTTCACTTTTAGTCATGTGATGCAGTATTGAAAATTAACTTTTATCCCTTGCCTTTTGTTTATAGGGAGTAGAGTGTGTTGTAATCTTAATTAATATGCAATGTGCCAACATTCGATTTCAACTTTCAAGACTCTCTTTGTCTCTTTGAGCTCAGAAAAGTTACTGTATACTGGAAAATGGGTTCCTCGTTTGCCTAATTTGGGCCCCATTTCAGTTTAAAGCTTCAATTTTTATTTCTAATACACGATTTTCTGCCCTGTTATTTTG


Gene Sequence:
>Vu_28854(-)
TACAAGAATGAAAAGCGCTTCTTCTTAGTAATCTCACTCTTGCAGCTAAGTCACACATGGCTCCAAACTCTTTCTAGTTTCAGTTTGCATTGTTAAGTCCATATCTTGCGACCTTGTGAGTTTGTGTCTAAGAATGGCTAAGCTTTGTGATGAGAATGGTAGTTGGTGGCTTCTTGAATTTCTGAGCTTTTGACTCTTCCTTCAGGTACCAAACTCTTTTCCTTTTTCTACCCCACTTGGATCTTTTCAGATTTTCTCCTCACCTCTTCAAATTTGTCTTCACACTTTACCTAATACTCTTAGAAATTTTTTGTCTTCCGTTCTTTATCATTTCACCTCTGAACGGCACTTTGAGCTTTGAAACACAGAAAACCTCAATCTTTATCTTATCTTAGATTCCATCTTCCCATTTGTTTATGATAATTGCTGAGGTGGAGTTCAATGTATTTCACATGTAACTGAGAGTTGGGGTTTAGGATTCATTGTTGTATCTCTTAATTCGCCCCTCTGAGCATATCTAGATATGCTTGGACAAGGGAATTGTCTCCTTAGATCACCATTCTTGCTATGTATACTCATTGGCCTCTTGATGCATTCTGTTGTGGGTGCTGAGATTCCCTTGGGTTCTAAACTTTCTGTGGTTGACAATGATTATTGGGTTTCCTCCAATGGTGATTTTGCAATTGGATTCTTCAACATTTCAGATCAACCCAACCAGTTTAGTGTTGGAATTAGATTCAATTCCAAGTCTATACCTTATAGTCGACAAACTGTGGTTTGGGTTGCTGGGGGTGATGTCACAGTTGGTAACGAGTCCTACTTTGAACTCACTCATGAAGGGGAACTGGTCCTGTTTGATTCCTTGCATGAAGCTTTTGCTTGGACCCCTGGAACGGGTAAACGATCTGTTGCATCAGCTTCACTCCTTGACAATGGAAATCTTGTTCTAATGGACAAAGAGCAACACATCATTTGGGAAAGTTTTAGGACTCCATCTGATACTCTTCTCCCAGGACAAAATTTATTCGCTAATGAAAAGCTTCGTGCAGCATCTGCAATCAAGAATAGCAAGTCTAGTTACTATAGTCTTCACATGAATGCTTCTGGGCATTTGGAGCTACATTGGGAAAGTGATGTTATCTACTGGACAAGTGAAAACCCTTCTTCTGCTTCGAATCTCAGTGCTTTCCTTACAACAAATGGAGCTCTAGAACTTCGAGACCGAAGGTCAAAAGCTGTTTGGTCTGCATTTGGACAGGATCACAATGATTCGGTGAATTATAGATATCTTCGGCTGGATGTGGATGGAAATCTTCGCCTATATTCGTGGGTTGAAAGTTTGGGATTGTGGAGATCGGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTGAACTTGGTGTCTGTGTCTTCAATGCCTCAGGTTCTGCTGAATGCAAATGCCCGTTTCAGGTATCTGCGGGTAACAAATGTTTGGTTCCATTTGAACGAGATTGTGCATCTGGTACCAATATGATAGCATACAAGAACACATATTTATATGCATTCTACCCTCCTGATAATTCTGTTATCACAAGTAATTTGCAGCATTGTGAACAGTTGTGTCTGAATGATCCACACTGTACAGCTGCAACATTTTCCAATGACAGAACTCCGCTATGTTCAATAAAGAAAACTGGGTACGTCACTGGCTATTCAGATCCATCTGTAAGCTCAATATCATTTGCCAAGAGATGTTCAGGTCCAATTGCTGTAAACCCAAGTTTCACAAAATCTCCTCCATCTGAACCACCTCCTCCTCTCTGTGTTCCTTGCCTAATGGGGGCTGCCACAGGCACATTTTTCATCATTGTTATTCTCCAGTTGGGAATTATGTTCATCTACAGAAGAAAAAACTCTACCAGGCAAAAGGCCACTTTAGGTTTCATTGGCACAAACTCAAAGGGTTTAATCGTGTTGTCCTTCTCAGAAATCAAGACCCTCACAGGGGACTTCAAGAATCAAATTGGGCCAAAGGTGTTCAAGGGTTTGCTACCGAACAACCTCCCGATTGCACTCAAAGACCTGAACGCAACCTTGGAAGAAAGGAAGTTTCGGAGTGCTGTTATGAAGATGGGTTGCATCCACCACAAGAACCTTGTGAAACTGGAGGGTTATTGTTGTGAGTTTGATCACAGGTTTTTGGTGTATGAATATTGCAAAAAGGGTTCACTGGACAAGTACATAGATGATCCTGCACTATGCAAGATGCTAACATGGAGAAAGAGAGTTGAGATATGCTCAAGTATGGCAAAAGCCATATGTTATTTGCACTCCGGGTGCAGGGAGTTCATCAGCCATGGAAATTTGAAATGTGAAAACGTTATGTTGGATGAAAACTTGGTGGCGAAGGTGAGTGAATTTGGGTTTGCTATTGCAGATGGGAAGGCAACATATTGTGGCTTTTCAGCTGAGAAGGATGTAGAGGATTTTGGCAAGGTAGTTTTAGCCTTGCTAACCGGGTGCCGTGATCATGAACATGTTGAACTTTGTGGGTGGGCGTATAAAGAATGGATGGAAGAGAGGGTGGTGAATGTGATTGATAGAAGAATGGAAGGAGGTTATAATTCAGAGGAACTGGAGCGTGTGTTGAGAATTGCATTTTGGTGCCTTCAAATGGATGAACGTAGAAGACCTTCCATGGGGGAGGTAGTAAGAGTTATTGATGGAACATTGAGTGTTGATCCTCCACCACCTCCTTTTGCGTTTCAGAGGCCATTGCAGGTAGATGATTCAGAAGAAAATGTTTCAGAGTTTGAAGTGTAGATGCTAGCTCAAATTCTAGGAACTTTTTTTTTTACCTGTTAGCTTTGCTTTTATATTTGATGTGTATAGTAGGACTGGACTAACTTCTAGATGAGACAAGAAAACCATGTCATTGTTTTTTGTCCCTTAACCATTTAGTGGTAGTTGAACTGTGAAGACAATGTTGTTCATTTCAGATCTGCAGCATCTGGCTTATGTTGTTTCCCTACTTGGAGACACACTACTTAAGAATGAGCAATTTTGGTATGTGTGAATATTGCTGTTTGCTGGAACTTAAGAGGACAAAGTAGGCTAATTAGAAGTTCAGTTTTA