Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28685 LG8 12789021 12789659 PREDICTED: ethylene-responsive transcription factor ERF107-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   ethylene-activated signaling pathway, ethylene-activated signaling pathway, ethylene-activated signaling pathway, ethylene-activated signaling pathway, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   intracellular anatomical structure, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
G/A 12789135 synonymous_variant p.Phe175Phe
C/T 12789354 synonymous_variant p.Ser102Ser
A/T 12789356 missense_variant p.Ser102Thr
T/C 12789417 synonymous_variant p.Thr81Thr
A/T 12789441 missense_variant p.Asp73Glu
A/G 12789449 missense_variant p.Phe71Leu
T/G 12789522 missense_variant p.Leu46Phe
G/T 12789618 synonymous_variant p.Arg14Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28685.1
MTTAEETSNLDLIRQHLLGENISTSFFSNFSNLVKLEAPSSAEFDLSSYISDNTSFFTFLEGYDLVADMEFVDQKPIMNSTSTPTISIPLNKCNSPEPLASSESQEKAKKAEYDVAKRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDSEIDAAKAYDCAAFKMRGQKAILNFPLEAGEYDPKPNTCGRKRRRESLQLELPQVHLHHGVS*


CDS Sequence:
>Vu_28685.1
ATGACAACAGCAGAAGAAACTTCAAACTTGGATCTCATACGCCAACATCTCTTGGGAGAAAACATCTCAACCTCCTTTTTCTCCAATTTCTCCAACCTTGTGAAGCTTGAAGCCCCCTCATCAGCAGAGTTTGATTTAAGCTCATATATCTCAGACAACACCAGCTTCTTCACTTTCCTTGAAGGCTATGACTTGGTGGCAGACATGGAGTTTGTTGATCAGAAGCCCATCATGAACTCCACATCAACACCAACCATCTCCATCCCCTTAAACAAATGCAATTCTCCTGAACCATTGGCATCATCGGAATCACAAGAGAAGGCAAAGAAAGCAGAATACGATGTAGCAAAACGTTATAGAGGAGTTAGGAGAAGGCCCTGGGGTAAGTTTGCTGCTGAAATCCGTGACCCTACAAGGAAAGGTACAAGGGTTTGGCTTGGCACTTTCGACAGTGAAATCGATGCTGCTAAGGCCTATGATTGTGCTGCTTTCAAGATGAGAGGTCAGAAGGCCATTCTCAACTTCCCTCTTGAGGCTGGAGAGTATGATCCAAAACCAAACACTTGTGGCAGGAAAAGAAGAAGAGAGAGCCTTCAATTGGAGCTGCCACAGGTCCATCTTCATCATGGTGTGTCATGA


Promoter Sequence:
>Vu_28685::LG8:12789659-12791659(-)
AAAAGAAGCTAATTTAAAAAATAATTGAAAATGATAGTCTCTCCTTCTAACTACCACCAACCCTTTTGTCATCATCATCACAACTTGTTAATAACTAAGAAGGATCATCACCCATATTTTATTTTCTTCTAATATAATAATGTTCTAATGAATAACTCTTCCTTTTCAATTTAAAGAAAATGAAAAAAAGAAAAAAATATCTTTCATATTTAATATTAATATATGGGTTAATAATGCTTACACGGGTAATATGCAATCAACATAACAGCTTTGAATTCTCAAATATTCTTCTTTGTCAAATATATAATAGGATAACACAAAAATATTATCTGATTTGTACAAAAATCTTGAATTTATATCATATTTTAGTAAGGTTCTCATATTTGATTTCATCTTTATCATACAATCAGAAAACAAATCTGAGAGTACAATAATGACCTTTCATAAGATGAATTTAACAAATCAAATTCTAAAAATGATGTGGTATTGTTTTAAATTATGTCAGAAAATTCTATTTCAGATAATGAATTCAACATTCACATTCAGCGACTAAAAGCCATCACAGAAAATAATTTAATTTAATTAAATTTTGGACTGAAAAACTCTTGCAATATGTTATTTCTCAACAACTATTTTGCATTGTTGGATTTGGTAACCTAGTTGAGCAAGTAATGTTGTTACCTATTAATGAGGATGTTTTTGATTTTATGTGAAAGGTTAATGGTATCAAAATTCATGGCCAATGGTTTTGGTGCAAGTTGAGAAATAGGGTCCCATCAACATTATTAAAAACCACTTTCTATATCTTGCAATGGAGATAGTCTCCTTCTTGCATGTATATAGAGAATAGACAAAAAAAACAAAACCAACTTTTTGAGTTCTAGACATGGACAAATCATCCCAAAAATAAAATTCATATTAAAAAATATTTAAAATTACAAAAGATGTGTATAAAATATCTTAAATAAGAATTATTGCAGAAAATGGTAGCACAAGTTGCATGATTTTGTTGTCCCCGATGTCCATGTCGATTGCTTCCTTGTAAGAACAACAGAGGATATGAGAATATGCCAAGGACCAACTTGGTGAAATGCAATTAAAGATTGTGTTTTTCTTTGTGGGCACACCTCTAACACTATGACATCACAATTTGGATAAGAAGATGCAGTGTCCAGAAACACCTCATTGCAAAAACCAGATAAAAGAGCCTCCTTTCTCATCCAACCATCAATTCTGATGTCTCTCACAACTGAATCTGGGACCCTTTTCTGTCTTCTACTCTCTCATTACAATGGCCATTATGAATAATAAACAAATGCAATTTGATCAACTTCAGTTAAACATTAGGTTAATTTTCAATTTTAAGATACAAAAGGTAAAGAAAACTTGACATTATAAGGGTGCGTTTGTTTAGAGTTTGCATACTTTCAAATACACATTTCTAAAGTCATCTCAAAGTCATGGTTAGAATAGCCATCATTAGAATCTTTCATCTTTTTTTAAAGATAAAACTTATACAGAGTTTCAGTTTACAAAACAGACGACATCTTAGATAGACGATGCATGGTGCTAACTTAATCCAGATAAAAAAATATTAAAATTTGAGTTTTTTTACAATTTGAGATAACCTTATCCTATATAGAATAAGGATATTAAAGAATAATCACTACTGATATATTCTTGACCTGAACTGAACAAGTATTCCAACACACTCATAGACCCTTGTTCTGGCAAAATTTCCAACTTGCCAGTATTTCTTTGAGAAATATCTAGTTGGAAGGTTTCCCCAAATTCCAAGGGTAGAGAGCAAATACTAGATAGAACACAGGATCGTGTTTACATCATCAAATGACCTGTTAATTGAAAACAACTATTTGAACAAAGACTTTGGTATCGTGGGGGACCCTTTCCCTTGACAAACAAATATAAATATATACCTTAGCTTCTAACCATTTTTCAATCCATTAATCCACCTCACATTTCTTCACCACTCCTTAAAG


Gene Sequence:
>Vu_28685(-)
ATGACAACAGCAGAAGAAACTTCAAACTTGGATCTCATACGCCAACATCTCTTGGGAGAAAACATCTCAACCTCCTTTTTCTCCAATTTCTCCAACCTTGTGAAGCTTGAAGCCCCCTCATCAGCAGAGTTTGATTTAAGCTCATATATCTCAGACAACACCAGCTTCTTCACTTTCCTTGAAGGCTATGACTTGGTGGCAGACATGGAGTTTGTTGATCAGAAGCCCATCATGAACTCCACATCAACACCAACCATCTCCATCCCCTTAAACAAATGCAATTCTCCTGAACCATTGGCATCATCGGAATCACAAGAGAAGGCAAAGAAAGCAGAATACGATGTAGCAAAACGTTATAGAGGAGTTAGGAGAAGGCCCTGGGGTAAGTTTGCTGCTGAAATCCGTGACCCTACAAGGAAAGGTACAAGGGTTTGGCTTGGCACTTTCGACAGTGAAATCGATGCTGCTAAGGCCTATGATTGTGCTGCTTTCAAGATGAGAGGTCAGAAGGCCATTCTCAACTTCCCTCTTGAGGCTGGAGAGTATGATCCAAAACCAAACACTTGTGGCAGGAAAAGAAGAAGAGAGAGCCTTCAATTGGAGCTGCCACAGGTCCATCTTCATCATGGTGTGTCATGA