Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28684 LG8 12718997 12720234 PREDICTED: ethylene-responsive transcription factor ERF105
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, response to heat, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to heat, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/G 12719003 5_prime_UTR_variant
C/G 12719209 missense_variant p.Ser24Cys
T/C 12719344 missense_variant p.Ile69Thr
A/T 12719346 missense_variant p.Thr70Ser
T/G 12719435 synonymous_variant p.Val99Val
G/T 12719439 missense_variant p.Asp101Tyr
T/A 12719523 missense_variant p.Trp129Arg
G/A 12719885 synonymous_variant p.Leu249Leu
A/C 12719987 3_prime_UTR_variant
C/A 12720109 3_prime_UTR_variant
A/C 12720115 3_prime_UTR_variant
A/T 12720116 3_prime_UTR_variant
A/G 12720130 3_prime_UTR_variant
G/A 12720182 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28684.1
MQTFEQNFTFCIPNSSLSSHSDISITDYLLPQDLQFQVHTTPQMPQLTSSSKPPRSSNLSNRKPSLKNITIPSITSGLVMPHHMETTSSTTSTTSGTTVYDSSNQVSSLDDGNNSREDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDRAAFRMRGSKAILNFPLEVGESEEESVSIKVGLKREREEESEGKKESNKLVKKEECSPKGVCPLTPSCWKGFWDTDVMGTIFSVPPLSPLSPLMVV*


CDS Sequence:
>Vu_28684.1
ATGCAAACCTTTGAACAAAATTTCACCTTTTGCATCCCAAACTCTTCACTTTCATCACACTCTGATATCTCTATCACTGATTACTTGCTTCCCCAAGATCTTCAATTTCAAGTTCATACCACCCCTCAAATGCCTCAACTCACATCTTCCTCCAAGCCTCCAAGATCCTCTAATCTAAGCAACCGCAAACCCTCTTTGAAAAACATCACAATCCCTTCTATAACTTCAGGTCTTGTGATGCCACACCACATGGAAACGACATCATCAACAACATCAACAACATCAGGTACAACCGTTTATGACAGCAGCAATCAAGTTTCTTCTTTGGATGATGGCAACAATAGTAGAGAGGATAAGCACTACAGAGGGGTCAGGAGAAGGCCGTGGGGGAAGTTTGCTGCAGAAATTCGGGACCCCAATAGAAAAGGGTCGAGGGTGTGGCTTGGAACCTTTGACACAGCCATAGAAGCTGCTAAGGCTTATGACAGAGCTGCTTTCAGGATGAGAGGGAGCAAAGCCATATTGAACTTCCCTTTGGAGGTTGGAGAATCTGAAGAAGAATCGGTTTCGATCAAGGTTGGTTTGAAGAGAGAAAGAGAGGAAGAAAGTGAAGGGAAGAAGGAAAGTAACAAGCTTGTGAAGAAAGAAGAGTGCTCTCCCAAAGGGGTGTGCCCTTTGACTCCATCATGTTGGAAAGGCTTTTGGGACACTGATGTTATGGGAACCATCTTTAGTGTTCCTCCTTTGTCTCCATTATCTCCACTGATGGTTGTTTGA


Promoter Sequence:
>Vu_28684::LG8:12716997-12718997(+)
TTTTAGATTGTACATTCTGGAAGTTAAAATTGATTTTTAGATTATGCAATCGGAAAGTCAATACTGACTTCTAAATTATACAATTTGGATCAAAAGTAGTTTATTTTTAAAAATAAAAAACATTCGGGTTAAAATATTTTGGAGATTATTTTTGACTTATATTGATTGGGTGCGGGAAGAAAATATGGAGGTGTATAAAGAATTTGCACAATTGTTGGATTCGAATATTGCAGTTTTGTATGGAGCTAATAGCACACTTCCCTTATCAAACCTTATAAAGATTCTAAGCGTATATTATGGATTCTGGAAATAGCTTATAAATTTGAAAATCATCAAGTTCAAATTACAATTTTGTAAGCTACAATCCTGAAATTCTTCACTTAGAGGTGTTTCATTCCTTATAAAATTTGGAATGCAATAAATAATAATTTTTTTTATTGTACAATATGTAGTTACGCTGAATTAAATAGTTTTCTATGTATATTTCGAAATATTTTCGAATTGAACGATAAAAAAAAAGTTTGAAAGTCACGTTTGTTATAAAAAAGAAAATGTGAAGTGGTATTTTGAAATAAGTGGTGGTGGAGGAAGAAATAATACAAGTGGAGAAAACAACATTACTATCTTTGTTTCTCGTCCAAATTTTACTCACTAATCTCTAACCGTATAAAAAAGACAAATCAATCTATTCTTAAAAAACTCGGGACAAATAACGTTATTCCATCTATTTATATTCAATTTCAAGATTACTCCATTATTTGATTTAGTAACTAAATATTTTATATAAAGTATTTTCAACTATGATCTGAATCCAAATTTATAAAAATGACAACTACAATTTTGTTTTACCATAAATACAAAATAACTTATTTAATAATCTTCTTCCATCCCTTTTTACATTTTGAGACAGTTTCTTAATAGTGCAAAATGATTATTTTGTATTTGTGGTGACTTGTTAATTTGTCAAATTTTTTAGTTGGATTAAGTTTTTAATCTGATAGTCTATTTTAATTTATTTCGTCTAATCTATCAAATTTACAAGCTAAAGAAAAGAAAGGAACTTGTCAGTTTTTTTTAACTAAAAATTAAAATAAAAAGATAATTTAATTTTTTTGTATTATTTTATTGAAAAAATATTAATTGTAATAATATTATAACCTAAATTTTTAATATTGATAAAATAAAATTTAATTATTAATTATAGTGAAGTAAGTTAATGGGTAAGAATAATAATTATTTTAATTTATTCTATAAGAGATATTAATTAATTAATTAAAATTTTCAAAATATTTATATAATTAAATGTCCTTTTAATATATATATATATATTTATAAGAAGTTTAAAAAATATAAAATATGAAAACAAAAATTTAAAAAGAAAGAGTTGACAGACCATTCTTTTAACCCATTTTTTAATGAAATGATTTAAGATTTTTAGTCCACTTTATTATGATAATCTATCTCATAAACTAGCAATAAACATCCATTTTGTTACTATAAGCAAATTACTTCTAGGGTTTTTAATTTTGTTACTATAAGCAAATTCTTGGTTGCATAGGTAATGGTCTCGTAAACATGATTCTACTCACCAATTCTTCCTGTCCGATTAAGCAACTCAGGAATTTAATAGAAAGAATACATTGAACATATTCATTCTATAATCTTCTCAATCGTAATCAGATATGACGTATTTGTATTTCTTTTTTGCACATTGGAAACAGCAACACTTGACACGCACACAGATACACATAACATTTAACGCAAAATCATCAACTTGAAATTAAATAAACCTTTTTACTTGATAGCCACGATCACGAAGTAGCCTCGAAGGGTCATCTCTCGAACCAAGGTCCCACAAAAAACACAAAAACACAACACAAGTCAATTTGACATTTGAAAATTCCAAAAACGACAATAAACGTAAGACGTGACATTTCTTCTAACCTCAATTATTGGTAGTTTTAACAATACGATGCTTCCTCTCACCATCTTCGAAACCA


Gene Sequence:
>Vu_28684(+)
AACCCACTTCTTCATTTCCTTCAATCTTTCTTACCCCTTTTTCACATTTATATACCCTCACTCTCCATTTTCCACTCTACCAATTCAATTCTCCACCTTTCCAACTTTTCTCCCTTTTCCCTCACTTCACTTCAATTATACCATGCAAACCTTTGAACAAAATTTCACCTTTTGCATCCCAAACTCTTCACTTTCATCACACTCTGATATCTCTATCACTGATTACTTGCTTCCCCAAGATCTTCAATTTCAAGTTCATACCACCCCTCAAATGCCTCAACTCACATCTTCCTCCAAGCCTCCAAGATCCTCTAATCTAAGCAACCGCAAACCCTCTTTGAAAAACATCACAATCCCTTCTATAACTTCAGGTCTTGTGATGCCACACCACATGGAAACGACATCATCAACAACATCAACAACATCAGGTACAACCGTTTATGACAGCAGCAATCAAGTTTCTTCTTTGGATGATGGCAACAATAGTAGAGAGGATAAGCACTACAGAGGGGTCAGGAGAAGGCCGTGGGGGAAGTTTGCTGCAGAAATTCGGGACCCCAATAGAAAAGGGTCGAGGGTGTGGCTTGGAACCTTTGACACAGCCATAGAAGCTGCTAAGGCTTATGACAGAGCTGCTTTCAGGATGAGAGGGAGCAAAGCCATATTGAACTTCCCTTTGGAGGTTGGAGAATCTGAAGAAGAATCGGTTTCGATCAAGGTTGGTTTGAAGAGAGAAAGAGAGGAAGAAAGTGAAGGGAAGAAGGAAAGTAACAAGCTTGTGAAGAAAGAAGAGTGCTCTCCCAAAGGGGTGTGCCCTTTGACTCCATCATGTTGGAAAGGCTTTTGGGACACTGATGTTATGGGAACCATCTTTAGTGTTCCTCCTTTGTCTCCATTATCTCCACTGATGGTTGTTTGAAGTTATGGCCTTTTGATCTTTCAATCATGAGGAGTTGGCCATGAAAGAAGAAAGTACTCAAGAGAGAGATGATGCTGCTGATTATCCTCTCTGAGCTGATAAGATATATGATGCTTTGTTTAATGTACATATAGGATAGTATGAAGCAAGATTTCTTTATTTGTTAAACAAAATTTCATGCTTATCTTCTTCCCTTTTCAATGTTCTTTGGTAAAAGATTGTACTGTACTAGAACCAATATTGAAATTTGTTTATTCGTTTATTGAGAGTTGAAAATGGCTGGTGAAGTTATTTATTGGATTTGAATTTTTTGCTGCTG