Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28668 LG8 12481354 12482704 "unnamed protein product, partial "
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 12481366 missense_variant p.Gly237Glu
T/A 12481372 missense_variant p.Glu235Val
C/T 12481384 missense_variant p.Arg231Gln
C/T 12481449 synonymous_variant p.Ala209Ala
G/T 12481452 synonymous_variant p.Ala208Ala
A/G 12481487 missense_variant p.Phe197Leu
C/T 12481498 missense_variant p.Arg193His
T/C 12481518 synonymous_variant p.Pro186Pro
C/T 12481531 missense_variant p.Arg182His
A/G 12481542 synonymous_variant p.Arg178Arg
G/A 12481567 splice_region_variant&intron_variant
T/C 12481588 upstream_gene_variant
G/A 12481642 upstream_gene_variant
G/C 12481663 upstream_gene_variant
A/T 12481682 upstream_gene_variant
T/C 12481698 upstream_gene_variant
T/C 12481726 upstream_gene_variant
G/A 12481743 upstream_gene_variant
A/G 12481746 upstream_gene_variant
C/T 12481748 upstream_gene_variant
G/A 12481795 upstream_gene_variant
G/A 12481796 upstream_gene_variant
A/G 12481819 upstream_gene_variant
G/A 12481829 upstream_gene_variant
G/A,* 12481834 upstream_gene_variant
A/C,* 12481839 upstream_gene_variant
G/A 12481861 upstream_gene_variant
C/T 12481865 upstream_gene_variant
G/A 12481866 upstream_gene_variant
A/G 12481867 upstream_gene_variant
G/T 12481879 upstream_gene_variant
C/T 12481903 upstream_gene_variant
G/A 12481904 upstream_gene_variant
C/T 12481909 upstream_gene_variant
G/A 12481916 upstream_gene_variant
G/A,* 12481921 upstream_gene_variant
T/C 12481928 upstream_gene_variant
C/A,T 12481935 splice_region_variant&intron_variant
G/A 12481939 splice_region_variant&intron_variant
A/G 12481945 missense_variant&splice_region_variant p.Ser171Pro
C/T 12481957 missense_variant p.Ala167Thr
T/A 12481963 missense_variant p.Thr165Ser
G/A 12481978 synonymous_variant p.Leu160Leu
C/G 12481983 missense_variant p.Cys158Ser
G/A 12481997 synonymous_variant p.Ser153Ser
T/G 12482010 stop_lost p.Ter149Serext*?
G/A 12482019 missense_variant p.Ser146Leu
C/T 12482056 missense_variant p.Gly134Arg
A/G 12482060 synonymous_variant p.Arg132Arg
G/A 12482093 synonymous_variant p.Pro121Pro
G/A 12482094 missense_variant p.Pro121Leu
C/T 12482104 missense_variant p.Val118Met
C/G 12482245 upstream_gene_variant
C/T 12482300 missense_variant p.Ser104Asn
C/A 12482384 missense_variant p.Arg76Ile
C/G 12482395 missense_variant p.Lys72Asn
T/C 12482401 synonymous_variant p.Leu70Leu
G/A 12482403 synonymous_variant p.Leu70Leu
A/C 12482407 synonymous_variant p.Val68Val
C/T 12482413 stop_gained p.Trp66*
A/G 12482464 synonymous_variant p.Ser49Ser
G/A 12482498 upstream_gene_variant
G/T 12482524 upstream_gene_variant
T/C 12482598 missense_variant p.Asn36Ser
T/C 12482599 missense_variant p.Asn36Asp
A/G 12482608 missense_variant p.Phe33Leu
C/A 12482657 missense_variant p.Glu16Asp
C/T 12482692 missense_variant p.Glu5Lys
T/C 12482696 synonymous_variant p.Pro3Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28668.1
MFPYEELERATGGFKEESIVGKGCFSCVFKGVFKDNTVVVVKRAIATMSGRKAIDMQYEEGNIVQWAVPLIKSGDRASILDPVLKAPSDVDALMGSPSIKLLHSPSIRSQHLWVSHYLWFLPYCCHHPPSPTVVGAVTRFTPITTLHLHSQSSPMHLHVLCQPQPPWPMLFRAPTVPFSSTSPSVSTTRRAMQTPSSLSSWSWATSWVRREVLQRPPPRLLSAKTLGNEWTTRSGGGWRGW*


CDS Sequence:
>Vu_28668.1
ATGTTCCCATACGAGGAACTTGAAAGAGCAACCGGTGGATTCAAAGAGGAGTCAATAGTGGGGAAGGGATGTTTCTCTTGTGTGTTCAAAGGGGTTTTCAAAGATAACACTGTTGTTGTTGTTAAAAGGGCCATAGCTACTATGAGTGGCAGAAAAGCTATTGACATGCAGTATGAAGAAGGGAACATTGTTCAATGGGCAGTTCCTCTAATAAAGTCAGGAGACAGAGCTTCAATTCTGGATCCAGTTTTGAAAGCTCCTTCTGATGTTGATGCATTGATGGGGAGTCCTTCCATCAAACTCTTGCACAGTCCTTCCATCAGAAGCCAACATCTTTGGGTTTCCCATTATCTGTGGTTCCTCCCATACTGTTGCCATCATCCACCGTCACCAACCGTCGTGGGCGCCGTCACCAGGTTCACGCCAATCACCACCCTTCATCTTCATAGTCAATCATCTCCAATGCATCTCCATGTTCTCTGTCAACCACAACCACCGTGGCCAATGCTCTTTCGGGCCCCTACCGTGCCCTTCTCGTCGACCTCTCCGTCGGTGAGCACCACAAGACGCGCAATGCAAACGCCTTCTTCTCTTTCTTCATGGTCGTGGGCAACATCCTGGGTACGCCGCGAGGTCCTACAGAGGCCTCCACCGCGTCTTCTGAGCGCCAAAACCCTAGGAAACGAATGGACAACGAGGAGTGGTGGAGGATGGAGGGGTTGGTAG


Promoter Sequence:
>Vu_28668::LG8:12482704-12484704(-)
TCATAAACTTTACTTCCAAATTCACTCTCATTTACCTCCAAATCCACTCAAATAAACAACAATTAATTCGCCCTTAAATCCCCTCAAATTCATCCACTCACTCTCTCCCAATTTCTCTCCCCCAAGTGAAAAAAGGCTAAATGTTGTCGATTAGACACATTTTACTTAATTGGACGAAACACTTTCATAATACGAACCATGATGGACAAACATACATGCAACACCAAATGATCTTATACAACAAGATAATAAAATTTTATTGAACTAATTTTAAAAAATATCCATCTTGGTTTAGGACAAATTTGTTGAGCGAGACTCACTTCAATTGTCACTAAGTCCATTACAAGCTTAATCATAAATTAATTAGATTAAACCCACAAAATGAAGAAACGTGTTTGACAACTTTTGTAATCATAGGATTTGTTGGAATCTTCACTCCTTAACAAAACCTTCATTAATAAACTCTTACAATATTCATCCTGATATGAATGTATATAATTTTTTTATAGTAAACTTAGTTCTCCACAATTGCATGACATTGTTATTATCACATTAGACTATGATAACTTGGTCTTATGTCTTTAGCTCTTTAGTTAGACTCCTTAACCATATGGCTTCCTTAACAGTTATTGTCATATCATTCTATTAAGCTTCAATTATAGACAAAGTCCCAACTTTTGAAAAACTGACATTCCAACTAATAGGAGTGTTATACAAAGTAAATGCATACCTTGTGAGAGATTTCTTACTTAAGACCATACACAAATCTATTCAATTTAGAAACAAAATCCTTCTAGTTTTCTACATCAAACGCTTCTAATTACTATATAGATTATGTCATATAAGTTTGCTAAGAAAGTTGTTTTAACCTTTCTTTTTTCTAGCTCAAGGTGAAGCACAACAACCATAACTAACAACATTTGAATGGATTTGTGATACACCACTAGTTAGAACAAATCATTACAACTAATTCCTCCCTTGTGGGAGAAGCCTCTACCACCAATTTTGCTTTGATTATCTTCTCATCAAATTCTAGAATTTTATTCTTGTGTTCGAAAATCCATTTAGAACTAACTAGTCCATAACCTATGGTCTACGAGTCAAAGTCTAGGTATTGTTCAAATAAAGTGAATTCATCTTGTCCCATCTAATAAACCATAAACTTAAGGGTTCATCATTTAACACCTCACTAACAACTAAGAAAAAGAGTAATAAGCTTTTCATATTCATACCTTTTATTGATAATACTATAACTATAATTTTCTCATCTATCTTCATTGTTTGATTCTTTGTCTACATAATCATTTAATTCATTATTATGTAAACAATTAAAAACTTTATTTTCCACCTACAACATTTTCCTTTTCACCATCACGACTACTTATAAACAATACTATAATCATATTGTGAAACTTTTGAGTTATACATCATTTTAATTTCATTAAAATCAATGTTCCAATTGATAGTATACTTCTTGAATCCAAGTTGAAAACAACATAATTTGTTTCCCTTTACTGGTTTTAGGTATCTACGTACATGTAACAACATGTGCTTTCAATAGTGCAGTCAGGGGAAACGACAACGGTTATTTTCGCCTATAGGCAGCGGTTCTTGAACCGAGACATATACAGGCAATGAAAAATGTCTATACTTTTATGCATCGGTTGTGAACCGAGTCAAAAAGGTGGAGGATTTCGCCTCAGTTCAAAATTAACCGAATCAATAGTATTTTTGATTTTTTTTAATTTTTTTTTCACAGGACTTTATGCCTCGGTTTCTCTGAACCGAGGCAGTATTGCAGAGATAACTTTTGTTGTTTTCTTTGTTTGTATTGTGTCCATAATTACGGTGTTGTATGTTCCTACAAGCTAAGAGATTGTCAGTGTTCTTCTTCAACAAGAGGGTCAAAGGGGAAGAAACTAAAAGGGAGTTCGTCACACTAGAAGGAGAAATCCAAGGTCTGACCAGACTTGGAGGAGTTCAAGATTAGGAGAGCAAAA


Gene Sequence:
>Vu_28668(-)
ATGTTCCCATACGAGGAACTTGAAAGAGCAACCGGTGGATTCAAAGAGGAGTCAATAGTGGGGAAGGGATGTTTCTCTTGTGTGTTCAAAGGGGTTTTCAAAGATAACACTGTTGTTGTTGTTAAAAGGGCCATAGTGTATCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACCGAGCTTGACTTGCTTTCTAGGCTGAATCACGCACACTTGCTCAATCTACTAGGCTACTATGAGTGGCAGAAAAGCTATTGACATGCAGTATGAAGAAGGGAACATTGTTCAATGGGCAGTTCCTCTAATAAAGTCAGGAGACAGAGCTTCAATTCTGGATCCAGTTTTGAAAGCTCCTTCTGATGTTGATGCATTGATGGGGAGTCCTTCCATCAAACTCTTGCACAGTCCTTCCATCAGAAGCCAACATCTTTGTTCTTCTATCAAACTCCAAATCGCGTCGTCACTTTTCCCCTACATCAAACAAACCTATAGAGACAAATCCCTGGCCAAAATTTGATTCAATCAGATTCAAGTTTCTTTCATTTCCATTTTTGAATCCAATCATAAAAGAAAATACAAGATAGGGGTTTCCCATTATCTGTGGTTCCTCCCATACTGTTGCCATCATCCACCGTCACCAACCGTCGTGGGCGCCGTCACCAGGTTCACGCCAATCACCACCCTTCATCTTCATAGTCAATCATCTCCAATGCATCTCCATGTTCTCTGTCAACCACAACCACCGTGGCCAATGCTCTTTCGGTGCGTCGCCATTCATCATCTCCATCCGCCATCGTCGTCGCTGCCAAGGAACTTCGTTCAACTCTTCTCTTCGCATCGTGGCACCATCGACACCATCTTCTCTTCTCGCCAAACGCCTTAGATTGGCGAGCCTCCCATCATCGTCGCCGCGGTACTCGTCTCCACCATCGTGCCTCCCCTCCGCTTTCGACGCCGCTCACCATCGTCATCCTCGCTAGAGCGCAAGCTGCTGCAATGGAGGAAAAAGCCTCCCCGTGCCGTGGCTATGAAGTGGGAGAACGGAGATTGCTCTCTTTGTTTCTGTCAAGAGGAAAGAAAACCCAAGTCATCTTCGTCGTCGGCTTCTGGATCCTAAACGTGGCCAATAACATGTTTCAGGGCCCCTACCGTGCCCTTCTCGTCGACCTCTCCGTCGGTGAGCACCACAAGACGCGCAATGCAAACGCCTTCTTCTCTTTCTTCATGGTCGTGGGCAACATCCTGGGTACGCCGCGAGGTCCTACAGAGGCCTCCACCGCGTCTTCTGAGCGCCAAAACCCTAGGAAACGAATGGACAACGAGGAGTGGTGGAGGATGGAGGGGTTGGTAG