Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28667 LG8 12476598 12478198 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 12476603 synonymous_variant p.Lys2Lys
T/A 12476605 missense_variant p.Val3Glu
T/C 12476644 missense_variant p.Val16Ala
A/T 12476677 missense_variant p.His27Leu
C/A 12476713 missense_variant p.Ala39Glu
C/G 12476889 missense_variant p.Arg70Gly
G/A 12476906 synonymous_variant p.Ser75Ser
T/C 12476976 missense_variant p.Ser99Pro
C/T 12476983 missense_variant p.Ala101Val
G/A 12476988 missense_variant p.Glu103Lys
A/G 12477024 missense_variant p.Thr115Ala
T/C 12477098 synonymous_variant p.His139His
G/A 12477103 missense_variant p.Arg141His
C/T 12477106 missense_variant p.Thr142Met
C/A 12477125 synonymous_variant p.Ile148Ile
T/A 12477179 synonymous_variant p.Arg166Arg
C/T 12477183 missense_variant p.Arg168Trp
A/G 12477188 stop_lost p.Ter169Trpext*?
G/A 12477206 synonymous_variant p.Arg175Arg
G/A 12477247 missense_variant p.Ser189Asn
G/A 12477271 missense_variant p.Arg197Gln
A/G 12477308 stop_lost p.Ter209Trpext*?
G/A 12477310 missense_variant p.Arg210Lys
G/T 12477311 missense_variant p.Arg210Ser
T/C 12477323 splice_region_variant&intron_variant
G/A 12477327 splice_region_variant&intron_variant
C/T 12477340 downstream_gene_variant
T/C 12477380 downstream_gene_variant
C/T 12477384 downstream_gene_variant
A/T 12477444 downstream_gene_variant
T/C 12477474 downstream_gene_variant
T/A 12477525 downstream_gene_variant
A/T 12477576 downstream_gene_variant
C/T 12477605 downstream_gene_variant
G/A 12477679 downstream_gene_variant
C/A 12477729 downstream_gene_variant
A/G 12477730 downstream_gene_variant
C/G 12477918 downstream_gene_variant
G/A 12477954 downstream_gene_variant
T/C 12477956 downstream_gene_variant
T/G 12477989 downstream_gene_variant
G/A 12478050 downstream_gene_variant
G/A 12478058 downstream_gene_variant
G/A 12478072 downstream_gene_variant
T/C 12478117 downstream_gene_variant
A/C 12478118 downstream_gene_variant
G/C 12478131 downstream_gene_variant
T/G 12478133 downstream_gene_variant
C/T 12478145 downstream_gene_variant
A/G 12478165 downstream_gene_variant
A/G 12478182 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28667.1
MKVEIARKFFQHLISVVDFFHSHGVTHRDLKPENLLFNANEDLKVRLISNLLVVDPEKGYSLLDIMKDPSFQVGFVRPIAFSMKETVVEDNIDFNGDDVGGSGNISGSEDGNNNNNHSRELVGAKPARPSYNAFEIISSLSHGFDLSNLFETRKRSPSMFISKHSASSVMAKLEAVAKKLNFRVTGKKQFTVRMQGATKGRKGKLGMTVKVFE*


CDS Sequence:
>Vu_28667.1
ATGAAAGTAGAAATCGCCCGAAAGTTTTTTCAACATCTGATCAGCGTCGTTGACTTCTTTCACAGTCATGGCGTCACCCACCGTGATTTGAAGCCGGAGAATCTACTCTTCAACGCGAACGAAGACCTGAAAGTGCGCTTGATCTCTAATTTGCTGGTTGTGGACCCAGAGAAGGGGTATTCCCTTCTTGACATCATGAAGGATCCTTCGTTCCAAGTTGGGTTCGTGCGCCCCATTGCGTTTTCCATGAAGGAGACAGTTGTGGAGGATAACATCGACTTCAACGGGGACGATGTCGGTGGCAGTGGAAACATTAGCGGCAGTGAAGATGGTAACAACAACAACAACCATTCTAGGGAACTGGTCGGGGCCAAGCCAGCTCGTCCGTCTTACAATGCTTTCGAGATAATATCATCATTGTCGCACGGGTTTGATCTGAGTAATCTGTTCGAGACGAGGAAGCGCTCGCCGTCGATGTTCATATCGAAGCACTCGGCGTCGTCGGTGATGGCGAAGCTAGAGGCGGTGGCGAAGAAGCTGAACTTTAGGGTGACGGGGAAGAAGCAGTTCACGGTGAGAATGCAGGGAGCGACAAAAGGGAGGAAGGGAAAGTTGGGGATGACAGTGAAGGTGTTCGAGTAG


Promoter Sequence:
>Vu_28667::LG8:12474598-12476598(+)
CAAAATGATTTTAATGAAGATGTTCAAAATATAGTAGAGTTACATGAATATTATTCTTTAAAAAGATTATTTCACCAAGTAAATAAAGTAAAATTTTGAATTTAAAATAAGGGAAGTTTTTCACACAAAAAAATATATAAATTCTGACGATGATAACTACTAAAAATTAAGTGAAAAGAATAAATATAAAAAGAAATGTGATTAATCTTCTTCCCAAAATTACTCCTCTTCATAAAAGTTTACAAACATACTTTAGAAGAAAGATTTATTCAAACTTCTAAGACTTTTTAATGTCTGAATAATTCTTTTATCAAATAGAGTTTATAAGAAAAAGACAAAAAAATTATATTGTTTCATTCTCTACTTTTGAACTACATCATCTTCTTAGAAAAACTCTTAAAAATTTCACCAATGAACAAATTGGTTATAAACAAATACGAAAATCACTTTTAATTAAAATAAGTGTAAAGACCATTTCTGATTTTCCTTTTCAAAAGATAAAAAAAAATCGAAGTATTCTCGTATACCCCACTTCTAACTAAAACAAAATAATTTTCTAAAACAATTACTCTAAAAAAATAAACAAATTGATTTTCTTGTAAGGTGTTTTACTTTATTGAATGAGAAAATTTTTAAAATAGAAATTTATTTTATTATCAATAATAAATAGATAAAATTTTAGTAGTTAATATTAAAGATTAATTAAACTCTAACTTACAAATCAAATATAAATTTTTAATAATAATAAAAACTACTTATTTTGATCTCTAAATTTGATTATTATTTAATAATTTTCAACGTATTGACATAACATTTGGATTTTTTTTGGTAACGAAGGTAAGGAGATATCTCTTAATTTGTTAAAGATTTTTTTTTCTTTCGAAAGTTTAAAAGCTCAGATTGATCGCATAAGGTTTTTCTACATTTAAATATATATGTTTCAACCTCCTCCTCTCCATTAGAAAAGATAAAAGTGTCCATGATTATCTTATTCGTATAAATAAAGAAAAGCTCATTAATTTTTTTTGGAATTTAGGATATTTGGTTAAAAAACATAAAAAAAATTGGAGGGATTTCGTTGACTCCATTTTGTAGTTTCTACGTGACTAATTTATAGATCTTGTTGTGTATGCATATACGCGTAATGCACCAAATTGATTGAATGGTTATATAAATGTACTATGATAAATCTAATAGTGAGAAGTTCGGATAGGATGCATGTGGATTTCCAGCTCAAACGTGAAAAGAAAAAAAAAATACAAGTATTATTGTATCATCTAAATTTAGTTTAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATTTGATTCATGATCTAATAAATGTAAAATAAATAAACATATATACAAAATATAAGTTAGGTTAAACCCATTCGGAAGTCCTTATTTATGTGGGTTTTTTCAGTTAGATCCCGTTTTATTAAAATTCCCAATTTAGTCCTAAAAAAATGTTAATTTGAGTCAATTGGATCTCTGTCGTTAAATTGGCTTAACGGGGTTAAGTTTTTTATGAAGTGGAGGGTTGACGTGGCAAGTTTTTTAAACATGGCATTCACAGAGCTCTACGTGGAATTTACAAATATTTCAACATTTTGATTAAAATTTTTTAAAAAAAGTCATCTTTCATTACAGTCAAGCACCACCCAGAACCATCATCAGAGAACCCAATCGCCTCAGAACCACCATCATCTTCCTCGTGCATCATTAACCTGCAAACATGTAACCACAAAATCAAAATCATGACTCCGCCATGTTCGCTTTAATTCATCTCCTTCCATCTAGCACCGCAAGGGCAAATCGCCACCATGGCCAACGTAACCAACGCTCAACCTCTTCGCGCCGCAACCGAACCCTAAATTGCGCTGGACACAAACCTGCAATCAGAGATTAGGGTTCATTGAAATTTATTTAGGGAGGAGAACTCTTGGCCAAGGTGACCAAAGGAAAGA


Gene Sequence:
>Vu_28667(+)
ATGAAAGTAGAAATCGCCCGAAAGTTTTTTCAACATCTGATCAGCGTCGTTGACTTCTTTCACAGTCATGGCGTCACCCACCGTGATTTGAAGCCGGAGAATCTACTCTTCAACGCGAACGAAGACCTGAAAGTGTCAGACTTCGCCTTGTCTACGAGACGCTTGATCTCTAATTTGTTGATTATGCATTCTCGTAATGGATTTCACCCGGGGCGAGGCGCTTGATCTCTAATTTGCTGGTTGTGGACCCAGAGAAGGGGTATTCCCTTCTTGACATCATGAAGGATCCTTCGTTCCAAGTTGGGTTCGTGCGCCCCATTGCGTTTTCCATGAAGGAGACAGTTGTGGAGGATAACATCGACTTCAACGGGGACGATGTCGGTGGCAGTGGAAACATTAGCGGCAGTGAAGATGGTAACAACAACAACAACCATTCTAGGGAACTGGTCGGGGCCAAGCCAGCTCGTCCGTCTTACAATGCTTTCGAGATAATATCATCATTGTCGCACGGGTTTGATCTGAGTAATCTGTTCGAGACGAGGAAGCGCTCGCCGTCGATGTTCATATCGAAGCACTCGGCGTCGTCGGTGATGGCGAAGCTAGAGGCGGTGGCGAAGAAGCTGAACTTTAGGGTGACGGGGAAGAAGCAGTTCACGGTGAGAATGCAGGGAGCGACAAAAGGGAGGAAGGGAAAGTTGGGGATGACAGTGAAGGTGTTCGAGGTGTGCGGTGGTGGAGTTTTCGAAACCCAACTTTTAAAATGTTTCTTTTATCAAATGCCATGTACAATGGTCTCTCAATGCCACGTTTAAAAAACTATTCACGTCAATATCATCGACTCAGTTCATCCTTCGACACTTGTTAGAAATAAAGTCCTTATAAGGGGGTGAATTGTATTTAGTACAACTTTTAAAAATTCTCTGAAATTTTTGGAATCAATTCACAAAAGATTATGATCAACATAAAGAAAATGTAAAAACTAAAAACAAGACCACACCAAATATATACTGGTTCGACTCTTAATCTGAGTCTACATCTAGTCTTCCTCCAACAACTTGAGTTGGAGGAATTCCACTATATTGCAAATAGTTAAGAATACAAATACACACTTAATTGTATCCTCAACCACTCCAATATACAAAATTACAAAACAAGAGTGACTTAATCACACACTCTCTCACACCTTGCCTACACAGCTACAGTGACTAAGAAATTTGTATAAGAAAACAAAACATGGGTGCACCATTTATTGTGCAGATCTTACAGATGTTCTTCCTTTCTTGAAACCTTGGAGATTTTTTAGATCATTCAAAATGGTTGCTTGATTGCTCCAAGAATGTTTCAAGATAACTCCTTGATGTGTTATTGTGTTCTTGTTTCACGTTTTATCATAAAGATGCAAAGTACTTTGTGCTAGAAACAAGTTAGATCACACATATATATACAAGATATGAAATCCTGATGCATTTAATCGGTTAGGTTAAAACCTTAATCGATTAGGCTCAACTCTCTATTTTAATAGATTAAAACAGAGATTATTGCCCTGTCATGCTTATGTCATGCTTTTAACTGATTTTGATCACTACTTAATTGATTAGTAG