Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28650 LG8 12274347 12277377 LRR receptor-like serine/threonine-protein kinase GSO1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction
Cellular Component   located in   plasma membrane, extracellular region, extracellular region, extracellular region, extracellular region, extracellular region, extracellular region, extracellular region
SNP Position Effect Amino acid change
T/A 12274372 synonymous_variant p.Ala127Ala
C/G 12274374 missense_variant p.Ala127Pro
T/A 12274382 missense_variant p.Lys124Ile
T/A,G 12274409 missense_variant p.Lys115Met
C/G 12274434 missense_variant p.Glu107Gln
G/A 12274519 synonymous_variant p.Thr78Thr
G/T 12274735 downstream_gene_variant
C/T 12274755 downstream_gene_variant
G/T 12274800 downstream_gene_variant
A/T,* 12274815 downstream_gene_variant
T/A,* 12274860 downstream_gene_variant
C/G 12274926 downstream_gene_variant
T/G 12274966 downstream_gene_variant
A/T 12274994 downstream_gene_variant
C/T 12274996 downstream_gene_variant
T/A 12275000 downstream_gene_variant
T/A 12275140 downstream_gene_variant
A/C 12275235 downstream_gene_variant
G/A 12275286 downstream_gene_variant
G/T 12275321 downstream_gene_variant
A/G 12275336 downstream_gene_variant
C/G,* 12275351 downstream_gene_variant
C/T 12275419 downstream_gene_variant
A/G,* 12275430 downstream_gene_variant
G/T 12275447 downstream_gene_variant
C/T 12275448 downstream_gene_variant
A/G 12275452 downstream_gene_variant
C/T 12275499 downstream_gene_variant
T/C 12275525 downstream_gene_variant
A/G 12275546 downstream_gene_variant
C/T 12275606 downstream_gene_variant
A/G 12275612 downstream_gene_variant
G/A 12275620 downstream_gene_variant
G/A 12275637 downstream_gene_variant
A/G 12275669 downstream_gene_variant
G/A 12275674 downstream_gene_variant
G/A 12275686 downstream_gene_variant
C/A 12275751 downstream_gene_variant
T/C 12275887 downstream_gene_variant
G/T 12275888 downstream_gene_variant
G/A 12275926 downstream_gene_variant
C/T 12276009 downstream_gene_variant
G/A 12276057 downstream_gene_variant
C/T 12276094 downstream_gene_variant
G/A 12276133 downstream_gene_variant
C/G 12276148 downstream_gene_variant
G/T 12276171 downstream_gene_variant
T/A 12276183 downstream_gene_variant
G/A 12276184 downstream_gene_variant
G/A 12276185 downstream_gene_variant
T/C 12276193 downstream_gene_variant
C/A 12276198 downstream_gene_variant
C/T 12276200 downstream_gene_variant
C/G 12276206 downstream_gene_variant
A/G 12276212 downstream_gene_variant
T/A 12276216 downstream_gene_variant
G/A 12276246 downstream_gene_variant
G/A 12276256 downstream_gene_variant
A/G 12276261 downstream_gene_variant
A/G 12276297 downstream_gene_variant
A/G 12276309 downstream_gene_variant
G/C 12276329 downstream_gene_variant
T/C 12276400 downstream_gene_variant
G/A 12276403 downstream_gene_variant
C/A 12276404 downstream_gene_variant
G/A 12276415 downstream_gene_variant
T/C 12276460 downstream_gene_variant
G/T 12276474 downstream_gene_variant
A/T 12276494 downstream_gene_variant
C/T 12276563 downstream_gene_variant
G/A 12276630 downstream_gene_variant
G/A 12276668 downstream_gene_variant
A/T 12276696 intron_variant
C/T 12276705 intron_variant
C/A 12276758 intron_variant
C/T 12276821 intron_variant
C/G 12276841 intron_variant
G/A 12276893 intron_variant
C/T 12276912 intron_variant
C/T 12277062 intron_variant
G/A 12277064 intron_variant
A/G 12277168 intron_variant
G/T 12277188 intron_variant
T/C 12277294 intron_variant
A/T 12277306 splice_donor_variant&intron_variant
C/T 12277307 splice_donor_variant&intron_variant
A/G 12277350 missense_variant p.Trp10Arg
T/A 12277364 missense_variant p.Tyr5Phe
G/A 12277371 stop_gained p.Gln3*

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28650.1
MVQRYDCKQWCKRMQMSSEGYGVGPIPKATQLTTLDDDFIYAGNPFLCGPPLPNECFLDDSQHGLEVEEQNENGNEDKPEKIWFYFVIAIGYAIGFWVVIGSLFMSRSWRHAHCQSIDEMVRRIKSLQCSWQGLR*


CDS Sequence:
>Vu_28650.1
ATGGTGCAGAGATATGATTGCAAGCAATGGTGCAAACGCATGCAAATGAGTAGCGAAGGCTATGGTGTAGGTCCGATTCCCAAAGCAACCCAGTTGACAACTCTTGATGATGATTTTATTTATGCTGGCAACCCTTTTCTCTGTGGACCTCCACTGCCAAATGAGTGTTTTCTTGATGATTCCCAACATGGCCTTGAAGTTGAAGAGCAAAATGAAAATGGCAATGAGGATAAACCGGAGAAAATCTGGTTTTACTTTGTCATAGCAATTGGCTATGCTATTGGATTTTGGGTTGTCATTGGAAGCTTATTCATGAGCAGGAGTTGGAGACATGCACACTGCCAAAGCATTGATGAGATGGTGAGAAGAATAAAATCCTTGCAATGCAGTTGGCAAGGTTTGAGATAA


Promoter Sequence:
>Vu_28650::LG8:12277377-12279377(-)
TCTTTGTCGTTTCCCTCGTCTTTGTTGTTGTGGTGGGGGAGTCTGCGTGTCTTCATCACTGTGTTCAAATTCAATGGACTGTTGTTGTGGTTGAAAATCCATGGTCGGTCGATGGAAGTTTTAAAGAACGTCCTTGGTATGCAGATGGTGGTGTCATTGTGGACGTTCCAAATATATGCAAAGGGCTCGCACCAAAAGTTGACGGACCCCATTAACGAAGGAAGGACTTGCAATAAATGTTGAAGAACCTCCACTAAATGCTGAAGGAGCTCTAGTGAACAATGTTGTTGGTGAAAAATAGTCGTAAAAGCTTCCAACTTGAGGATATGATGATGTATGTGGGATGTTTTGTTGGGAGCTTGGATATGGTGATGGATACTGCAGGTGATCATAAGATGACTTGCGGGTCATGGTACGCAGGTGGTGGTGGAAATTGTTGTTCATTATCCATGTCATACTGTTCAATAAATTGTTTAAGTTAGTTTGTGAGAAGAAAACATATATTATTAAATGGAAATTGAAAATATTCCGGTACATCTTCATCAGATGACTGTTCAATCAGGGCAACATAGCGGATGATGACTTTTATACCATTGCATATACTCTGTATCATTGCACAAATGACCATTTTTGTTGAATGGAACCCCGTTAAATACACGGTTGTGCCGGTCATTCCTTAATGCAATCCATTGTTGATGGTGTTGTTGCTAATTCTAATCCGCTCGTCGTCTCATATCCTCTTTATGAATATCATCTAGATTCATTGGGGTTGACGGGATGGTATGTCGAAACCCAAACTGACGCATCACACGTTCTGATTATTGATATTCTACTATAGAAAAGCATATGAGAGGCACTACTGCCCGACAAGTGAGAGACAGTTCCACTTGAATCATCCAGCGATTGTCATCACATTTATAGGGAGTCCAGATGAATTGGAATAATGGTATTATTGGTTAGAATAGTTATATTTTTATTACACTGCCTGACATATAAAAGATACTGTCAGAAAGGAAATTTTGATTACCTATCTCGGTTGAAGGTCGTTAAATTTTTGACGAAATTTTTGAACGGTAGTGGTGTCGTGGAGTATTGACTGTGTGGTTTGACACCATCTTTTCGCTAAGGGAAAAATAACACCGATAACAATATCCTCATCCGTGACTTCATGTATTTATGGAGAAATACATGTAATTCGTTCCCATGCCTAACACTATAACAATATCATGCAGCCTATGATATTGTCTTGATCAATCCTTGTATCATGATCAAGGGCACGATACAAGCAGGACAACACTGTAGATCCTCAACTGTAGTTCGACATATTGTGTAAGTTGGCTAAAAGTGGGAGATACATCAAATGTACCATACTTGCAGATGTATCCCACATTAATATGCTCCCAATTATCATCAAAATATATGCTTCAGCGTATTGTTGAATGTGATCATCATTGATATCATGAGGCAATTGTCAAAATCTGTTATTCAGCCATGACAATTTAATTTTGTTGCCTCTAACATATGTCTCTAAAGGAACATCCCCCAATAATATTTGACAGTAAAATAACAGTGGACCACTACTGATGCGAGTGATAGCCTCGCTTTCAATCGGAAGGCCGACTTGCAATGCAACGTCTTCCAGTGTTATAGTTGTTTCCTCAAGGGGCAAGTGGAAGGTATGTGTCTCCATTACGCAATGTCATTGTCTTTGGACTTCGACGTAAAACAAATAAAAGAGACCAACCTTTGGACTACAACAAAGACAAGAAAAAGAACTTATGCTCCACAAACAATTGCTTTACAAACCGTATAATGTGATGGTATGGTGCACAAATGCTTCCAACCATTTATTGAAGGGGAGAATTGATTCCCCTGGCACATCTTGACGTGATGCAATTGATGTCATTGATGAGATGAATGGAAAGAATCAATAATGTTAGGTGCAATAATCTTTGGTCAATGCATGATGTGGTTCAAATGAAAAAAACAAAGGGAAAACA


Gene Sequence:
>Vu_28650(-)
ATGGTGCAGAGATATGATTGCAAGCAATGGTGCAAACGCATGCAAATGAGTAGCGAAGGCTATGGTGTAGGTAAGTACATATGAGTTTTTTTTCATAATTTTAAAATTTATTTTCATTAAATTATAAAATAAAATTATTTATTTATTTAATTTTACATACAACTAATTATGTTTAATTTTTAAATTATACTATACTTTTTTACTAATTATAACTAATTATTAACATTCTTTTTGATTTAAAATGATTTAAATTAATAAGAAAATAAAAAAGTAAAAATGTAGGGGATGACTTCTTCTGTTGAAGTCGTGCACCCTGTACATTTTCAATTTTTTTTATTAATTTAAATCATTTTTAATTTTTAATTTATATTTTTAAATGTTGTTAAGATTGTACACTGGATCAATATATTGGGTTAGTGGTATATGGGAATATGCACAAACCGCAATGACACGATGACATGGGAGGCGAGTAACTTGGAAGTGACCACAATCACGCCACCATTCATTTAGCCTAGCATTAAACGAACTTGAATGTGGGCGATATTGGTGGGGTGTTGAAATTTCCTGAACATCAAAATCTGAATTTTCACGATCGTTCCAATGAACATGACAAAATGCAGATTGTTGTTGATTTTTGCGAATAATGTCAGTGAATTCTTTTGGATATTGGTGGTCTGCTTGTAGCATGTACTGTGTTTGTAAGCCTCGTCCAAGAAACCATGATTGTTGCAATAAACAGAGTTCAAACGTCCTATTCCCAACCAACTTCTTCTGATCTTAAGGCTGATAGGATACCCTCCCCTTTGTCAGTGATGATGCAAATATGTTGTTGAGGGGTAACATGTTTTTGAAGTAATTGAAAGAACCATATCAATTCCTCCTTTGTCTCACCTTCCACAATGGCAAATGCTAATTTTAAAAGATTTTTGTTGTAATCCTATGTGATCGCGGTGAGGAAAGTTCCATGATATTTGCCCATTAGAAAAGTTCCATCTACTTGGAGAATGAGTTTACAATATTTGAATCCTTCTATGCAAGGACTGAAAGACCAAAAAACTCTTTTTATAATATAACAATCACTGCCAGGTTCTCCATCAATCTCCACTAGAGAACCAGTGTCTCGTAGAATTGCACCAGGATTTGCATCTTTGACCGCATGTAACCATATGGGGAGATGGTGATAAAAATCTTCCCAGTCACCAAACTCCATAGCAAGAGCCTTTTGTTTGGCCATCCAAGCTTTTCTGTATGACAAAGAAAATCCAAACTGATTTTTGACGTCTGCAATCAAACTCTTGATGGGAATGGAAGGGTTTGATACGATGACGACAATATGATTACTATCAAGATTTGTATGATCATGAGATGGTATGATTGAGAAACATGTGTGGGTTGTCAATGTTTTTGATTTCCCAATGTTGACAGACTTTACTATAGCCCACGCTCAAATGCCATTAGCAACCATTGTGGTATTCTAGACAACGTACAACATATATTTTAGGCTTTGATTCAACAACATTGAATTTATATACGTTGTTGATGTGATATTGTTTGATTGCAGAAACTGTCTCCTCCTTCGATTGGAATTGCATATGCTGGTGCAGTTCTGCAATGACATGTTGAGATGATTGTGTGATTTGTTGGTCATCATTTCTTCATCGCAAAATAAGTTATCTAACTCATCGTGTGAGCTAAATTCATAACATTATCTAATATCAAAGATTCGTCGTTGATGATTTGCGATGATGATGATGCTCCGAAGTTCTAGGATGCCATTAGGAATATGGGTTTGAGAGAGGAAGTTGACGAGAATTTATGGATATAGAAAACATTTGCAAAGAGAAGTTGTAAAAAAGTAAGAAATTTTGGGTGTTGCGCGCATGCCACTCTTTATTGTATATGCTGCCAAAACATATAACTAAACATATAGCCTGACAGCATCATGCATTTACGTCAAGGTTGAAAGCTTGTAGTTAGCTAAACATATAGCCCTTGAGGATGCAGTTCATTCACAATAGCATAACATGCATTTAATTCATACTATAATGTTCATGTACTCAGCAATGAAAAGACTATTTCATATTATTTAAACTATTATTGTTTTGAAATTAAGTTTAATATATGAAATGAAATAAGAAAAAATTACAGTTCAACAAAATAAATAATTGTTATTAGTTATATATATATATTTTAGATTAATTACAATATATTTAGAAACATAATTAATTAATATTTTTAAAAATTATTTAAGTATATTAATCTACTTACAAAAATAGTTAAAAGTTTTTATTTTTAATAATATTAAAAAACTGAAATTATTAATTCTATATGATTTACATTATTTTAAATACATTTAAAAACATAAATTAGTAATTAAAAATGATTTAAATTAATAAAATAAATAAATAAATAAAAAATGTGTTGGTGGACGACTTTAATTGAAGACGTCGTGCCCTACATTTTTACTTTTTTAGTTTTTTTATTAATTTAAATAATTTTTAGTTTTTTTATTAATTTAAATAATCTACTAGACCCCTCTTGTCTTCTTATAGAGGCAATCACTTCTAACTACCCAACCAATTAATTCCTATTTTCTGCATCTATTACCCATTATAACCTCTCGTTAGATCCTATCAGCATATCTAGTTTAACTTCGTTGAGCCACTTAAATCTGTCCTGCAACAACCTTTCAGGTCCGATTCCCAAAGCAACCCAGTTGACAACTCTTGATGATGATTTTATTTATGCTGGCAACCCTTTTCTCTGTGGACCTCCACTGCCAAATGAGTGTTTTCTTGATGATTCCCAACATGGCCTTGAAGTTGAAGAGCAAAATGAAAATGGCAATGAGGATAAACCGGAGAAAATCTGGTTTTACTTTGTCATAGCAATTGGCTATGCTATTGGATTTTGGGTTGTCATTGGAAGCTTATTCATGAGCAGGAGTTGGAGACATGCACACTGCCAAAGCATTGATGAGATGGTGAGAAGAATAAAATCCTTGCAATGCAGTTGGCAAGGTTTGAGATAA