Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28595 LG8 11313057 11314026 PREDICTED: nuclear transcription factor Y subunit B-9-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09151 Immune system   C 04612 Antigen processing and presentation [PATH:ko04612]
SNP Position Effect Amino acid change
A/G 11313061 3_prime_UTR_variant
T/G 11313175 3_prime_UTR_variant
T/A 11313176 3_prime_UTR_variant
C/A 11313186 3_prime_UTR_variant
A/C 11313188 3_prime_UTR_variant
C/G 11313791 synonymous_variant p.Ser26Ser
G/A 11313828 missense_variant p.Ala14Val
A/G 11313891 intron_variant
G/A 11313971 intron_variant
G/A 11313974 intron_variant
A/T 11313982 intron_variant
A/G 11313988 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28595.1
MAGAREQDQYMPIANVLRIMRKILPSHAKISDEAKETIQECVSEYISFITAEANDRCQREQRKTVTAEDVLWAMGKLGFDDYAQSLSIYLNRYRQSEGDRMSVRRAPTSVPPMEMMNPPYQPYPPHGFGMFDYDPSHSIASSSRSGGLVPNIDPYVNPKPNDDFDPFLNPKPADDNHM*


CDS Sequence:
>Vu_28595.1
ATGGCTGGAGCGAGGGAACAAGATCAGTACATGCCAATAGCAAATGTGTTAAGGATCATGCGAAAGATCTTACCATCGCATGCAAAGATCTCCGATGAAGCGAAGGAGACCATCCAAGAATGTGTGTCGGAGTACATTAGTTTCATCACTGCTGAAGCAAATGACCGATGTCAGCGCGAACAACGTAAGACTGTAACTGCTGAAGATGTTTTGTGGGCTATGGGAAAACTTGGTTTTGATGACTATGCTCAATCTCTTTCTATTTACCTTAATCGTTATCGCCAAAGTGAAGGAGACCGTATGTCTGTGAGACGTGCTCCTACTTCTGTTCCTCCAATGGAGATGATGAACCCACCTTATCAACCTTATCCTCCTCATGGTTTTGGAATGTTTGACTATGATCCATCACACTCCATAGCTTCTTCTTCAAGATCAGGTGGACTTGTTCCAAACATTGATCCTTATGTTAATCCAAAACCTAATGATGATTTTGATCCTTTTCTTAATCCAAAACCTGCTGATGATAATCATATGTGA


Promoter Sequence:
>Vu_28595::LG8:11314026-11316026(-)
CGCAATCAAAAGTTGGAGAGGCCAAACATGGTCGAAGAACAAACATGGCCAAAAGTTGTAGAAGTCGAATAAAGGTTGATAGCTGGAGAGGCCAAACAAGACCGAAGACCGAACACGATCAAAATTTGGAGAGGCCAAACATGGCCGAAGATCGAACATGGCCAAAAGTTGGAGAAATCGAATAAAGGTTGAAAGCTGGAGAGGCCAAACAAGGTTGAAAACCAAACACGACTAAAAGTTGGATAGGTCGAACAGAGGCTGAAAGCTGGAGAAGTCAAACAAGATCGAAGATCGAACACGACTAAAAGCTGGAGAGGCTCAAAGAACACTAAAAGTTGTAGAGGCTACACATGGCCGAAGACCGAACACGACCAAAGTTGAAAAGGCCGAACAAAGTATGAAAGTTTGGAGAGGCCAAACAAGGCCAAAGGCTAAACATGACCAAAAGTTGGAGAGGCCAAACAAGGTCGAGGACTGTCGAGTAAGCTCTATTGCACTAACATTAACATGACCATCTCACCAAAGGGGTTTCTTTTGCTCGTTATCTTACTTCTCTAAGGCGTCACGAAACTCTTTCTTCACAATTTATATCTCAATCCCAAGGTGGACGCCAATTGTACTTATGGAGTCGAGTATACCCTGTGAAGATTAACTTCACAAACTTCTTTAATATTCCCTGGAAAAACCATTCTTCCTTCCCTCCTCTCGGTACTCGTCATTTCATAGCTGAATGAAAGTGTGTCTGTAAAAGACACTTTGACGCTCAAGTTAGACGGATGTATCAGATAATAATTAATGTTGTCATAATAATAATAATGAATCTAGACAGTATAATAGCATGTAACACTTAAAAAAAATTATAAAACTCAAATTTTAGACTTATATGTAATTTTAAACTTTCTTTATTGGACCGCATTGTAAAAATGGAGAACATCTATTTGAAATATGAAAGTAAAACTTACTACTGAAAAAGCTAATAATTATTATAGAAATAGACAATAGCCACGTAAGATCGATTCCTTAAAATGTGTGCCATTGTCATATTTTCTTTCAACCGTATCTGCGAAACTCTAGCACGAGGGCGCACATTAGAATCTTTATTTCATAAATGTATTTTTTATTTTATTAATATTCATTCTATATCTCAGTAAATTTAATGATGGTTTAAATAAAAACTTAACAAAGCAACATCTTCTCGTATAAAGAATGTGGTTACGAGCTTTTTGATTTCACTGTCAAAACACCTGTCTAAAAAAAGTAAAAAATGTTTTAATGATCTTTTCTTATAATTTCCATTCATAACATTTGCATAAACATGAAAATTAACATTTTTTATATTGAGTAAAAATAAAAAGTTCTCATAAATATTAATTTGTAAATAAATAAGAGTAAAACTTTCTTAAAATTATGTAGGTTAAAGACAAACTCTCAAATGAAAGACCAAATCATGGTAAATTGAGAGTGGAACTAGTGGGGAAAGAAAATGGACCAAGTATAAATATGTAATCATGGTTAAAAGGATCTAACCTTAAATGTCTTGAAGTTTGGCTCTTTAACAGGTAATGATAACAGTAATCATCGAGTTGTTCACTCCAAATATCTTTGCTTTGAAAATGTAAAAATGAATTTCATGATCCACAATAGGTAATCTATATGAAAATGAATTAGTAATAATTAATATATATTAAAATAAAATTTAAACTATCATTAATACGTTTGAGATTTTCAAGACTAATAAATGTTTTCCCTGTTACGAATTCACATGACTTCTTAGGCGTAATAAAATATTAAATAATTGTTTCGCTTCATTGGCGAGTAAAATTCACAATAAATGGTACCTTCTTCCATAAATCTTTTGTCATTATGTAACAGTTTCTTCTGATGAATAAATCCACTCGCATGCTTATCTGGCACTCCATCGTCCACATTATTGTTACACTGTTCAAGAAAAACACATGCATCTCTTTCAATAAATAGACCCTTTTACACCGATTTAGGTT


Gene Sequence:
>Vu_28595(-)
ATAAAAATACCAGAGGAAAGAGAAGTAAGTGAACATACTTTTTCTTTTCTTTCATCTTCATGTAACTATTATCTATTTTTCCATCGCATGCATATCTATCTTTCTATGATGTTTTTTTAAGGATGTTCCTTTAATTAGCTTTTGTAATTTCAGGTGCCATGGCTGGAGCGAGGGAACAAGATCAGTACATGCCAATAGCAAATGTGTTAAGGATCATGCGAAAGATCTTACCATCGCATGCAAAGATCTCCGATGAAGCGAAGGAGACCATCCAAGAATGTGTGTCGGAGTACATTAGTTTCATCACTGCTGAAGCAAATGACCGATGTCAGCGCGAACAACGTAAGACTGTAACTGCTGAAGATGTTTTGTGGGCTATGGGAAAACTTGGTTTTGATGACTATGCTCAATCTCTTTCTATTTACCTTAATCGTTATCGCCAAAGTGAAGGAGACCGTATGTCTGTGAGACGTGCTCCTACTTCTGTTCCTCCAATGGAGATGATGAACCCACCTTATCAACCTTATCCTCCTCATGGTTTTGGAATGTTTGACTATGATCCATCACACTCCATAGCTTCTTCTTCAAGATCAGGTGGACTTGTTCCAAACATTGATCCTTATGTTAATCCAAAACCTAATGATGATTTTGATCCTTTTCTTAATCCAAAACCTGCTGATGATAATCATATGTGAATGTGTTTCTGCATGCAGCTACATTCACAAGATCAATGGTCCTGGTATGAAACTAATACATGCAGAGAGACGTCATGATGATGCAAGTGTTTAATGTTTTGTTTTCCCTTCTACAGTTGTTTTCAGTTCGAGACAGTGTCTCATAGTTTATGTTTAATGTTTTTCTTTTATGTTTCAAGAAGTTAGTGTTCACTGTAGTATCTTACTACACTGTGTTGAACACTTTTGTATCGTGAACTACTAAATCATAAATAAAGAAGGTGTGTTATGTTATT