Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28505 LG8 7583289 7589544 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, circadian rhythm, regulation of transcription, DNA-templated, cell differentiation, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   zinc ion binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/T,* 7583289 5_prime_UTR_variant
T/A 7583386 5_prime_UTR_variant
G/T 7583434 intron_variant
G/T 7583441 intron_variant
C/A 7583532 intron_variant
T/C 7583542 intron_variant
G/T 7583574 intron_variant
A/T 7583625 intron_variant
A/G 7583812 intron_variant
A/G 7583943 intron_variant
C/A 7584111 intron_variant
A/T 7584191 intron_variant
T/G 7584233 intron_variant
A/C 7584261 intron_variant
A/G 7584278 intron_variant
G/A 7584286 intron_variant
G/A,* 7584362 intron_variant
C/T 7584392 intron_variant
G/T 7584395 intron_variant
T/C 7584485 intron_variant
G/A 7584487 intron_variant
G/A 7584492 intron_variant
T/G 7584541 intron_variant
T/C 7584549 intron_variant
G/A 7584553 intron_variant
T/A 7584652 intron_variant
T/C 7584743 intron_variant
T/G 7584777 intron_variant
G/T 7584787 intron_variant
T/C 7584858 intron_variant
G/T 7584948 intron_variant
G/C 7584989 intron_variant
G/A 7584998 intron_variant
G/A 7585055 intron_variant
G/C 7585064 intron_variant
T/C 7585077 intron_variant
T/A 7585237 missense_variant p.Leu10His
C/G 7585238 synonymous_variant p.Leu10Leu
G/T 7585559 intron_variant
G/T 7585938 intron_variant
C/G 7586002 intron_variant
G/A 7586051 intron_variant
G/A 7586223 intron_variant
T/A 7586454 intron_variant
G/T 7586750 intron_variant
G/C 7586793 intron_variant
A/C 7586875 intron_variant
T/C 7586979 intron_variant
C/T 7587072 intron_variant
A/C 7587098 intron_variant
T/C 7587261 intron_variant
T/C 7587265 intron_variant
C/A 7587267 intron_variant
C/T 7587275 intron_variant
A/T 7587285 intron_variant
C/T 7587289 intron_variant
G/T 7587301 intron_variant
C/G 7587313 intron_variant
T/A 7587535 intron_variant
T/A 7587568 intron_variant
G/C 7587726 intron_variant
A/T 7587737 intron_variant
G/A 7588024 intron_variant
G/T 7588080 intron_variant
C/G 7588147 intron_variant
T/A 7588272 intron_variant
T/A 7588310 intron_variant
A/T 7588498 synonymous_variant p.Thr89Thr
A/G 7588810 synonymous_variant p.Ala193Ala
C/T 7588894 synonymous_variant p.Ala221Ala
C/A 7589002 3_prime_UTR_variant
G/A 7589003 3_prime_UTR_variant
C/T 7589226 3_prime_UTR_variant
A/T 7589464 3_prime_UTR_variant
T/G 7589465 3_prime_UTR_variant
A/T 7589467 3_prime_UTR_variant
G/T 7589523 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28505.1
METIGSVDDLLDFSLDIGEEDDDEDKHRKSCPSLNSKCGNPSLFNSLVPDDPNHSYSEFVEEELEWLSNKDAFPSVETFVDLSCIQPDTAKIKKSTPVTSPVLEDSTGSSNSNNSSNSISLLNSCDHLKVPVRARSKRRSRCRPGIADENSGQQVWWRQPSNEISKAEEGMKISPIGRQCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFRSDLHSNSHRKIVEMRRQKQMGMG*


CDS Sequence:
>Vu_28505.1
ATGGAGACCATTGGTTCTGTGGATGACCTCTTGGATTTTTCGTTGGACATAGGCGAGGAAGATGATGACGAAGACAAACACAGGAAATCCTGTCCTTCACTTAACTCAAAATGTGGCAACCCATCATTGTTTAACTCATTGGTACCAGATGATCCGAACCATTCATATTCTGAGTTTGTCGAAGAGGAGCTTGAATGGCTATCCAACAAAGATGCATTTCCTTCTGTTGAAACATTTGTTGACCTATCATGTATTCAACCTGATACAGCCAAGATCAAAAAATCAACCCCAGTAACAAGCCCAGTACTTGAGGACAGCACAGGCAGTAGCAACAGTAATAACAGCAGTAACAGTATTTCTCTCCTAAACAGTTGTGATCACCTTAAGGTCCCAGTTCGTGCACGAAGCAAGAGACGCAGTAGGTGTCGCCCTGGCATTGCTGATGAAAACTCTGGTCAGCAAGTCTGGTGGAGACAACCAAGTAATGAAATTTCCAAGGCAGAAGAAGGGATGAAAATCTCACCAATTGGGAGGCAATGTCAGCACTGTGGAGCTGAAAAAACTCCACAGTGGCGGGCAGGTCCCCTTGGGCCAAAAACACTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGTCGGCTTGTGCCTGAATACCGTCCTGCCAGTAGCCCAACTTTTCGTAGTGATTTGCATTCTAATTCCCATAGGAAGATAGTAGAGATGAGGAGGCAGAAGCAAATGGGAATGGGGTAA


Promoter Sequence:
>Vu_28505::LG8:7581289-7583289(+)
AAACCTGCACAAAAACACTGAAATCAAGCATAAACCTGTCCAGCTCTCTTATTTCTAAAAATATGACCAAAAGCATGATTTCAAGCTAGTTTCTAAGTGTTAAAGGTTGCTTTTAGTATCAATTTTAAGCATAAAAATAACAGTTTTTCAACTGTTATCAACGAGGAAGAAGAAGAAGCTGTCGACGAAAATGGAGGTTCTGCGCGATTTGAAAATATGAAGTTGAGATACTACCTCGGTTACTCATACACCCGAGGTAATATCACCATACAGCATTGGTTAAAAGCATCAACGGTGTAGAACATGTGGAGAAACGACCTCGGTTCAGTGTTTAACCGATGCCCTAGGTCGTAGCAGCAGTTGGACAGGCGTAGCAGTAGTTGGACAGGCGTAGCAGTAGTTGGACAAGCGTAGCAGCAGTAGTTGGGGCAGGTGGTTTAGGCCTCGGTTCGCCTGCAGACCGAAGCAATAGGCTACGGTTTAGGCACCGGTTTCCCAACTAACCGAGGCAATAGGCTATGGTTCAGACTTTTCAGGTGACCAGCAAAGGCTTATAGGCTTCGGTCTCGTCCTAACCGAGGCAATAGGAAGGCGTTTAGGCCTCGGTTTCTGGGCGAACCGAGGCAGTAGCTTGTGGTCAGACTTCTCAGTGTCTTTTCAGACTTATCAGACTGAGCAGCAGGGGTGTATAGGCCTCGGTTTCTGGGCGAACCGAGGCAGTAGCTTGTTGTCAGACTTCTCAGTGCCTTTTCAGTCTTTTCAGACTGAGCAGCAGGGTTGTATAGGCCTCGGTTTTGTCTGAACCAAGGCAATAGGGCTGTTCCACCACGGGTTGAATAAGGACCGAGATATATAACCTTGTACGCTTCGGTTTTGGTATAACAGAAGAGTATATGGAGCGTCAAAATCTACATTTTTTACTAGTGTAATAAGAAAATTAAGAAGACCTTATTATGAATAAGGATAGAATATAAAAGGAAAACAAGTCCCAAAATTCATGGAGATACATCTTTTAATGAAATGGCATATAATGCTTCATTTAATGGGAATCCTATAGAAAGGAGCTTCCAATGTGTTCTATCAAGAAAGGATCCATTCTTAGTAATTGAATAGTAATGCTCATGTAATAGTGCAAGAAAAGTCTATGCTGAGCAAACAAAAGAGAATGTGTATTAGGAAAAAACTGCACAACAATATAATTGGAATTAGTGGAATAAATATAAAATCTTTACCTTCTATTATTTTTTATTCAATTTCATTATATTTAATCATATTATATTATTATTATAAATGTAAAGTTTCAATGTACAAACATATATATTTAAAGCAATCAAACATAATTGAACATAATAATATAATAATATAGAAATTATTGTTTATGCACACATACTGTCAAAATTAATATTTAATTATTAAATATAAAATAATTAATAAATATTCTTAAAATATAATTATAAAAAATAAAGAAAAACTTTAAAGGATAATATAAGTAATAAAATAATTTATATTAATGAGAATAAAAGTGACAGTAAAATCTGTAAAAAAAATGGTTATTAATAGTCGTAAAAAACGATCCTGTAGACATAAATGAATTTGAATATAAAGATTCTACACATTTAGAAATCATCACAAAAATTCTTAAATTTAACCTTTACCCTAATAAGATATAAGTTTCAAATCAATTAAATAATTGTTTTTTAAGAAAATTTATGAAAAGTAAAATCATTTATCAAATTTCAAAATACTCTATATGCTTAAATTTAAACTGAAAATATTATTTTATTTAGTTTACTCTTAGAATAATTATATTTTTATCAATTGTTTTAATAAAAATAATTTTCAAAGATAATACTGTCAACAAAATTAAGCATATTATGAAAAAATTTATTTCTTATAAAAATATTATTTGAATTTTTTTATAATAGAAAATAAAATAAAATGTAGATATTATCTGAAAAGAAGAAAGACAAAATACAACTATGAAAAGAAAAAAATCTGCA


Gene Sequence:
>Vu_28505(+)
ATATGAGTCTTTCCTAATCCCTACACGTGCCTACCATCTCTTGTTCTCGCTCGCTCCGAACTCAACTCTCTTCTGGGGTTTCTTCTCTCACATTTGCTATTGCAACAACACAAGTACATACAACTTGAAAAACTGGTAAGTCTTAGCCTTTTGCTGTTTTGGTTTATACCCATGCTTTTGTTTCACATAATAGTTTCTCTCAACCCTTATTCTCCCCTATTGCTTTTTCATTTTTTTATTTTTCCTTCATGTTTAATTTGTGGCTTTCCTCTGCATGAAATAATTGTGGATTTCCCAGAAAGGTTGCAGTATGGGTGACTTGATATCATTGGGTTAAGGTATATATAAATATAAATATATATATATATATATAAATATAAATATATATATATATAAATATATATATATATATATATATATATATATATATATATATATATATATATAATTTGTCATAGTTCTGTTTATTCTGGAACAAAGAAATGTAAAAAATATGCACAATCCCCAGAACAATGACATAAAAAATGCACTATTCAATAGAGAATATGCTTTACACCTAATTGAAGCCAATAGTTCATTCTTAATTCAGAACCAATTGCAGAGGTAGTGATATTTTCCTTCAAAATACAGGTGTTTCACTCCACCAAATGCAGCATGTAGTAGCAGAGCTTGCAGACTGTCATAAAAGCTTAGCCTCACTAGTTGTACTAAAATCATTGACGAAAGCTAGTTAGCAAAAATTAGTACTGGGTCCAGGTGCAACCTTAACCAGACAATGTCCATACTTCATAAGAAGAAAGCACAAGTAAAAGCTTTCGAGAACATATGTGGAAATGATCTAGAACCAGACTAAAACATGTTACATAGTGGATGTTTTACATCGACCAGAAGAGAGAAGACCAATTTAAAATATAAAAATAGGTACAAACCTTACCTTATAAGTTTATATTGTAGGGTTGAGTTAGGCTTAAAACTCACTTCTTAATATGATATTAGAGCCTGATTTAGAGTCTATCCTAACAATGTTTGACATATTGTTCCACTAGATATCGGATCTTAATGTCTAGTCCCATGCACGAGATATATATATATATATTTTGGCACGAGGGGATTTGTTATAAGTCTTATATTGACTAGAGATAAAGTCAATTTAGAATATATATAAGTGAGTTCAAACTTTACTTTACAAGCCGGTTTTGTAAGGTTCAATTAGGTTTAAAGTCTACTTCTTATCATTACATAAAAGAGCCTCTTGTCCTGTACCGGAAGGTGTGCAATGCAAACTTCTGCAAAATATAGTTGCCTTATTTTTAGGGAGGTTTTAAATTTCAATTGCAATTGTAGTTCTTGATATTGCAGGAAATTGTGGATAAATGTGACTGATACGACCACTATTGCGGTTACACAAACCAACTAAAATCCTTGACATTGTGGCCGAAATGATGGTCGCAGACTTTTTTAAAACCTTTAACCTTTTCCAACAAGCCATCAAAATTTTGTCCAAGGTAGGGCAATAGTCTCAATGCTCACCAAAATTCCTAGAAAGGGAGCTCCATGATCAAAAGTTTATTTTGCAATGAGGTCTTTAAATTTAGATTAACTAAAGAATAGATATCATCTAATTTGGAGAGCGTTTATGATAAAATGTTGTCTCTTACTGGCTCATCTCTTATTCACAACTATGTTATATGTGTAAACAAGACATCTTAGGATTGTATAGTCTGAATTTATTTATTTTGTGGCTTTAATGCTGTCATTTAAACATTGAGAAATTTGAAATTTCTTATATTGCATACTTGTATTGTATGGAATACTCTTATCTTCACTATTTTATCTATTTTGTTTACACATTTTTCTTGTTCCTTTATTCATATCTCTATAAATGCACTCTTAGGCTTAAATATGTTGTTCTTTCCAGAGATGGAGACCATTGGTTCTGTGGATGACCTCTTGGATTTTTCGTTGGACATAGGCGAGGAAGATGATGACGAAGACAAACACAGGAAATCCTGTCCTTCACTTAACTCAAAATGTGGCAACCCATCATTGTTTAACTCATTGGTACCAGATGATCCGAACCATTCATATTCTGTAAGTTTGATATTCCCATTTTGATCTCTTTAGGAATGTTTATGGCCCATGAAAAAATAGATTATATTGGTTTTTGAGTTTTGAGTTTTAACTTGTCAGTGCTTCTGTTATGCAAAAAGAGAAACAATTTATGAATATATGGTTTGATTGGAATCAGCTGAAGTTGGAATTTGAACCGGGGGCTTGGGTGAGTGAATTGCAGAAGGTACATGGGATATCTTTTAGTGAGTATAAAAGGTTTCTAATTGGATTTCAACTTGTTTTATTAGGGTGCAGCTTTTGTTGCTGGATTTAGAATGTTCTGTTGGGCACTTATAGTGGTGATTATTAGTAGTGCTATTTATCTGATTTGGGGTTTCTGATATTTTAAATCAGTTAGTGAAAATTGTGCTGAGAGATTTTCACTTATTTCTATTGGCATAATTGTATTGGAAATTCTAGATTGGTAAATAAATAGTTTATCCTGTCTCTTCACGTACTTGTAATGATTGCTATGGTTCTAAGGTTTTCATATTGTGGAGCCATATTGATGGGGACCAATTATTAAATGGGCCCAATGAGCCTCTAGCCCATGAAGAGAAGTACAATTCAAGATGGGGAAGGGTATATGTGAGAAAGAAGACCCAGGATAATGACGTGGTCTAATTAGAAGAGTGGTTAGTTAGAGGACAGTTTTGACAAAAATGGACAGTTTTGGATGGAGTGATGAAGTGCAGGAGGCATTTGAAGAGATAAAAAGAAAAATCACTACAACACCGGTATTATGCCTTCTATTCAAAAAAGAATTTGAGTTGGAGTGTGACGCATCAGGAGCTAGAATTAGGGCAATTTTAATGCAAGATAGAAGAGCTGTGGTGTATTTTAGCAAAGCCTTGAGCCCTAGAAACGTATCTTAGTCAGCATATGAGAAGGAGTTAATGGTTGTTGCTCTAGTCATTCAACATTGGAGGTACTATTTAATAGGGAAGGAAATTCAAGGTTTACTCAGACTAGAAGAGTCTTAAACAATTTCTGCAACAGAGAATTACAGACAGAATTCAAATAAGCTGGGTGACAAAGCTTTTGGGTTTTATTTCGAGATAGTGTGCAAACCTGGAAATAAGAATAAAGGTGCTGTGCTTTGTCGAGAAAAGTTGAGGAACCAGAACTGAAGAGTATGATATATACCCGTTTTGCTGGACTTCAAAGATTTAGTGGCAGAAGTGCATGAAGATAATAAAGGGAGGAAATTGATAAAGGAGCTGCAACAAGGAAACAATGATAAGGCTAGCACTGGGTTCACGTATAAGTGTGGATTTTTGCTATACAAGGGAAGATTGGTGGTTGCCGAGAATTCCCATTGGATCCCAAGGCTATTAGAAGAGTTTCATGCCTCTCCACAAGCAAGGCACTCAGTTTTTATTGCACATACAGGTGAGTTGCAGCTAAAATAATGTCCTCAAATTTGTCCAAGCCTATGATACTTGTCAAAGGCAGAAATACATCTCTGCATCTCATGGAGGACTACTGCAGCCACTCCCAATTCCAGAGACAGTTTGGGAAGACTTGTGATTGTGGACCAATTGACTAAATACTGCCATTTTCTGCCACTAAAGCACCTGTACACTGCTAGAACGATTGTAAAAGAAACAGTGAGGCTCCATTGCATTCCTAATTCAGTGGTGAGTGATAGAGATCCATTGATCATGAGCCCATTTTGGAAGGAGTTTTTCAAAATGAAAGGGACCTTGAAGATGAGTATAAGGTATCCTCAATCAGATGGACTAACAAAATGACTAATATATGTCTTGAAACTTATTTGCGATGTTTTATTACGGACCAACCCAAGGAGTGGGTTACATGGCTCCCATGGGCAGCATTTTGGTTCAACACCACATTTCATGAGTCCATAGAACCCCCTAAAATAGTACCAGTTGCACAAGGGGACGTAAGACCCGAAGTTGTTAAAAGAGAGCTAATGGATAGAGATGAAGCTTTGCGACAATTAAAGAAGCATCTATCGAGGGCACAAGACAGAATGAGGGAGCAGGCCAATAAACATCATATAGAGAGGAGTTTTTGAGGTTGGTGATATGGTTTTCCTTAGGCTTAAACAACAATGTCAACACTCTATGATGAGTAAAATCAGCTCCAAACTAAGTGCAAGGTACTACGGTCCTTTTGAGATCCTAGAGAAGATTGGAGTAGTTGCTTATTGTTTGAAATTACCACCCTCTTCAAGAATACAACTGATGTTCCATGTTTCCTTGCTTAAGAAGGCAGCGGGTGATTATAAAACAGTAGACTAACTACCAACAGGTATAGAAGATGAAAATGTGGAAGTCACGAAGCCTGAATCCATATTAGGTTCAAGAAGTATTATGAAGAGGGGGGAACGAGTTAACCAATGGTTGGTTCATTGGAAAGGAAAAACAACAAAGGAGGCAACTTGGGAGGATGAGATTTCTCTTAGAAGTCAATTTCCCAGCTTGAGTCTTGAGGACAAGATAGTACCAAAAGGAGGGTATTGATGGGGTCCAAAGAATAAATGGGCCCAATGAGCCTCTAGCCCATGAAGTGAAGCACAATTCAAGATGGGGAAGGGTATGTGAGAAAGAAGAGCTGGGGTAATGATGTGGTCTGATTAGAAGAGTGGTTACTTAGAGGAGAGAGAAAAGAGGAATACTTTTCTGTTATTAGTATCAGGTGTGGAGAGAAGGGGAAGGGGGATTGCTTTGCTGTTGAATAGAGAACCTTGTCGGTTACTCTAAAGGAGCTTAGCTCTGGGCAATAGGATTGATTTATCTTGCTCTATTTTCTTTTGCAGATAAGTCTAAGAGCTGTCTTATATTTCATTCACCTATTCTCTTCTGTTGTTTGTTTTTGTGGTGTGGTTCTGTATCACATATGTTCTTCAGTTTATAAGAAAAAAAAACTGTGTGGACATTATTTTCTTGATCCATAGGTTACTACTTATCTATGATTAATTGCATTGGTCTGATACCTGTCTTGACTTGAAACATGCCCCCATTTTCATGTTCCAGGAGTTTGTCGAAGAGGAGCTTGAATGGCTATCCAACAAAGATGCATTTCCTTCTGTTGAAACATTTGTTGACCTATCATGTATTCAACCTGATACAGCCAAGATCAAAAAATCAACCCCAGTAACAAGCCCAGTACTTGAGGACAGCACAGGCAGTAGCAACAGTAATAACAGCAGTAACAGTATTTCTCTCCTAAACAGTTGTGATCACCTTAAGGTCCCAGTTCGTGCACGAAGCAAGAGACGCAGTAGGTGTCGCCCTGGCATTGCTGATGAAAACTCTGGTCAGCAAGTCTGGTGGAGACAACCAAGTAATGAAATTTCCAAGGCAGAAGAAGGGATGAAAATCTCACCAATTGGGAGGCAATGTCAGCACTGTGGAGCTGAAAAAACTCCACAGTGGCGGGCAGGTCCCCTTGGGCCAAAAACACTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGTCGGCTTGTGCCTGAATACCGTCCTGCCAGTAGCCCAACTTTTCGTAGTGATTTGCATTCTAATTCCCATAGGAAGATAGTAGAGATGAGGAGGCAGAAGCAAATGGGAATGGGGTAAATGCAAAGTGGTAGTGCCGTTAGCATTCAGCAAGCTAGGACTTAGAGATTTGATTTTCTTTTCGATTTTGATTTATTCTAATTTAATTTTTTGTTCACTTCTGCTATGGTTGGTTTTAGACAGGGAAGTCAAAATTCTTGATTGAAAATGAAGTTAGGAATGTCTTAAATTGCTTGTGTATTTGTTATGCAGAAAACAAGGAAGCCAAATTGGGATCATTTGATTTGGCTATTTTTTAAGACTGTAACATGTAGAGGTAAGTTGCTGGAATGATGATTATGGTCCCTTTTCCGAAGGAAAGCTATTATTCTTATCTGAACTAATTCTAAATTGTTAAGACAGTAGTGGTGCAGTTGATTGTTGAGGAAATATGTCACCATTCAAGGAGTGATGACATTATTCATGTATTTGAAGAAAGAAAAGACAAATTCTGTCTTAGAAAGAAAAGATAAATGCTGTCTTATCTTAGATGTAAAGTTATTATTTGATTCTCCTTCTAAGGGGTCAAAATGTATGCAACAAAATTTGAATCAATCAAGCCTTGACTAATTGGTGGCTAC