Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28414 LG8 5652765 5655517 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 5653010 synonymous_variant p.Gly82Gly
C/T 5653270 intron_variant
A/G 5653432 intron_variant
A/G 5653793 intron_variant
T/A 5653795 intron_variant
C/G 5653961 intron_variant
C/T 5654092 intron_variant
G/A 5654217 intron_variant
T/C 5654601 stop_lost p.Ter248Glnext*?
T/C 5654753 synonymous_variant p.Cys298Cys
A/T 5655135 stop_gained p.Lys426*
A/G 5655182 synonymous_variant p.Arg441Arg
C/T 5655262 missense_variant p.Ala468Val
A/C 5655290 synonymous_variant p.Ile477Ile
T/A 5655298 missense_variant p.Leu480His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28414.1
MPPHPTAELFPGHRNLTPLPTPQQQQQHYEVMMFGRDIMPPSLHDFTSTPHDSAAAAAAAAATMTLPTPPTFDAEGAGCIGGDPSTGRWPRQETLTLLEIRSRLDPKFKEANHKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKDGKAGRHDGKHYRFFRQLEALYGENSSTVSVPETNVVGSIHFQASSHDPSQTNQDKFQSHNSKHCDSLSLTNSTNFDTTSSDDDNDHHSMENESIEKRRKRNSGRSWKVKIKDFIDSQMRKLVEKQKEWLDKLVKTLEEKEKERMLREEEWRKQEANRLEREQKFWAKERAWIEARDAALMEALQKLTGREIMKPETPNHGINVTAAEVQNHSENQNNEDESEILNSCNVIRGGDRWPESEITRLQQLRAEIETRFPCSEISEEVSWEVVATKMACFGYERSALMCKEKWESISNYPREGEKEGSKKCKENTRNSIFFKNNDDHRQSSLYDQGSAYCDDISDQGKEIERLQTNNSSSPSKCNTGNVDPSDSCFPFLMSSEGGNLWENYGLKLNKENQNH*


CDS Sequence:
>Vu_28414.1
ATGCCACCCCACCCAACGGCGGAGCTTTTCCCGGGCCACCGGAATCTCACACCCTTGCCCACTCCCCAGCAGCAGCAACAACACTACGAGGTTATGATGTTCGGTCGTGACATAATGCCACCTAGCCTTCACGACTTCACTTCCACACCCCACGATTCTGCTGCTGCTGCTGCTGCAGCAGCAGCCACCATGACTCTACCCACTCCACCCACCTTTGATGCCGAGGGTGCAGGTTGCATCGGTGGGGACCCCTCCACTGGAAGATGGCCCAGACAAGAGACCCTCACTCTCCTTGAGATCAGATCTCGCTTGGACCCTAAATTCAAAGAGGCTAACCACAAAGGACCCTTATGGGATGAAGTCTCTAGGATCATGTCTGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACAAAGGATGGTAAGGCGGGGAGACATGATGGGAAGCATTACAGGTTCTTTCGTCAACTTGAAGCCTTGTATGGAGAAAACAGTAGCACAGTTTCAGTCCCAGAAACCAATGTTGTTGGCAGCATTCATTTTCAAGCAAGCAGCCATGACCCCTCCCAGACAAATCAAGATAAGTTTCAGTCTCACAATAGCAAGCATTGTGATAGCCTCAGCCTCACCAACTCCACTAACTTTGATACAACATCATCTGATGATGACAATGACCACCACAGTATGGAGAATGAGTCCATAGAGAAGAGGAGAAAGAGGAACAGTGGGAGGAGTTGGAAGGTGAAGATAAAAGACTTCATTGACTCACAGATGAGGAAGCTTGTGGAGAAGCAGAAGGAGTGGTTGGATAAACTTGTGAAGACACTGGAAGAGAAGGAGAAGGAGAGGATGTTAAGAGAGGAAGAGTGGAGAAAACAAGAGGCAAACAGGTTAGAGAGGGAGCAAAAGTTTTGGGCCAAAGAGAGAGCGTGGATTGAAGCCAGGGATGCTGCTCTAATGGAGGCTTTACAAAAGCTAACTGGAAGAGAAATAATGAAGCCTGAAACTCCCAATCATGGTATCAATGTAACGGCTGCTGAAGTTCAAAACCACAGTGAAAACCAGAATAATGAAGACGAGAGTGAAATCTTAAACAGCTGCAATGTTATCAGAGGTGGTGATAGGTGGCCAGAATCTGAAATTACAAGGCTTCAACAGCTGAGAGCTGAGATAGAGACAAGGTTTCCATGCAGCGAAATTTCTGAAGAGGTTTCATGGGAGGTAGTAGCAACCAAAATGGCTTGTTTTGGCTACGAAAGGAGTGCTTTGATGTGCAAAGAGAAATGGGAAAGTATCAGTAACTATCCAAGGGAGGGTGAAAAGGAAGGGAGCAAGAAGTGCAAGGAAAACACTAGAAACAGCATTTTCTTCAAGAACAATGATGATCATAGACAATCTTCCTTATACGACCAAGGAAGTGCCTACTGTGATGATATCAGTGATCAAGGAAAAGAGATTGAGAGGCTACAAACAAATAATAGTTCTTCACCTTCAAAATGCAATACCGGAAACGTTGATCCCTCTGATAGCTGCTTCCCCTTCTTGATGAGCAGTGAGGGTGGAAACTTGTGGGAGAATTACGGCCTAAAGCTCAACAAAGAAAACCAAAACCACTGA


Promoter Sequence:
>Vu_28414::LG8:5650765-5652765(+)
TTTATATTATTAAATTATTTTAACATCAAAATATTCTGTCTCATTATTTTAAACATCTATTAATTTTAATACTCCAGTTTCCATATTATATATGTATATATTATATAATAAATATTGTAAGAATTTGATACTAGAAGTAAGATTTAATGTTTAGTATATATATATATATATATATATATATATATATATATATTAATTATGAGTAAGTGTTCCAGTTTATAGAACTTTAAAAAAAATCCGTAAAATATTATTTAAAGAAAAAGTAGGGGAAAGTTAAGCAAATTGTTTAAAAGTATTTATTTAAAAATAAATTGAAAGCAGCAGGGTTTGTTGCAGTGAATGATACCAAAATTAAAAAGGTAGCATCCCAGACACTATACAAGCGTCAGCAATGCAAACTTGCTGTCTTCCATTCGTCATCCCATTTTTAGGACCCTCATTTCCACAGATCATTCACTTCATTTATTTATAACTCATTCAAAAATAAATTATATATATATATATATATATATATATATATATATATACACACACATACATATCTTAAAATTAAGACAATAATCACTTAATAAATTATCAATAAATTTTTATTTTTCATTATTTATTTTTTTTATTAAAAAATATTAAGAGTAGAAAGAATGTTTGATAGTAAAATATCTTAATTTTAGAATATATTATTAACTATTTTTATTAACATTTCATCCATTGAAAAGAAGTTTATTGAAATAACAAAAGTCTTGTAAATTCTATTTGTGATTTACAATTTCACAAATAGATTAAACAATGTTATTCTAAATTTTATTGAAACCAAAATTTCAAAACTTTAGAAGATAATATTTGAAAAAAGGTAAAGAAATAAAAATTAGATTATTATCCTAAACACACAAATACATACATATATACATACACACACACATATATATATATATATATATATATATATTATAATTATTTAAATAATAATAATGCATAATTTAATAGTTCAAAAGAGAAAATTGATTTGTTTTTAAAAACAAGGTAATATATATTTTTCTTTTACATGAAACCTTATTAATTGTTCTTGCTTAAAAAATGATTCAAGATGAAAATGTATTAGTGATAGTAAAATTAGAATTTGGATTTCCTGTTTTTAGTGGTAGTATTGTACTGTAGTTTATAAACATTGATTGTGTTATTTTAAAATATATTAAAAGAAAATTTTGATATATCAGCAACAATATATTTTAAAAAGTGGACATAATAACTATACGAAAGAAAATGTAGAGAATTTGGAATGTTTAGTTGGTGGAGGCGATCCAAAAGAAGTGGAACTTAAACTTTGATTTGAATAATAATCCGTAATAAAATGGAAGAGGTAATTAATTAAGAGATTTAATAATTTGTATGGAACATATATTGATGTTTGTGTTTGTGGCTTAGGGCTTAGACCCTTTTTGCTGGCTTCTTCCAAGCACTTCAACCCCACTCTCCACACTGTTCTCAACAAAGACACAGAAGGAAACAGCATTGTTCTTCCAAAACCCAAATAGACAGATAACATATCCCAAACACTCCAACACTAATACTATATAGTATAGTTTAAACAAACACAAACAGTGTCACTCTCTCTCTCTCTTTCTCTCTCTCTCTGTAGTCTCAGTCTCATACATATACATATACACCATCACAAGCATACACATGGACATGGGATGGGACCATAGTCCTCAGCTCAAATTTTGAGCTTTTTCGTGCACGACAGGATCCGACTCTGCCGCTTCTACCACTCTCCCTTCTCTCTCTCTCTCCACCCTTATTTCCAATTCATCACACCCTCTTTCTCTCTCAACTCCCATTCATGGAAATGGAAGATCACAATCACCACCACCGCCATCACCATCATCAGCATCACCATCACCATCACCACCAGCAGCATCAACATCAACATCAGCACCACTTTGGCGTCAACGATCTCAGGCAAGTCGTCAATGGGCCGAGGACTTCCCACAACGCCTTCCTCTCCA


Gene Sequence:
>Vu_28414(+)
ATGCCACCCCACCCAACGGCGGAGCTTTTCCCGGGCCACCGGAATCTCACACCCTTGCCCACTCCCCAGCAGCAGCAACAACACTACGAGGTTATGATGTTCGGTCGTGACATAATGCCACCTAGCCTTCACGACTTCACTTCCACACCCCACGATTCTGCTGCTGCTGCTGCTGCAGCAGCAGCCACCATGACTCTACCCACTCCACCCACCTTTGATGCCGAGGGTGCAGGTTGCATCGGTGGGGACCCCTCCACTGGAAGATGGCCCAGACAAGAGACCCTCACTCTCCTTGAGATCAGATCTCGCTTGGACCCTAAATTCAAAGAGGCTAACCACAAAGGACCCTTATGGGATGAAGTCTCTAGGTACAATATTCGTTCTTTTTAACTTCTGCATAAATCTAACTTCTCCATATACACTGCATAATAAGTTAATCAGAAACTCTATTCTTTACCTTCTTCAACTTCACTGCATAACTTGATTTTAGGTTACTATAGAAATTCAATTAATTTACGTTCTTTATTTATGGAGTGCATAAGTTGATTACAGGTTCGAAGAGAAGTTTTCTATTGAATATTTTGCGGGTAAAATCTATCTAAATTACAGAGTTATATTTTAGATTTAACAATTCTTCTTCTTCGATAGCACTTACTTTTTTCTCTTCAATTTCTGTAGATTCGGGTTGAGAATTTTAAAATGATAATTTTGGTGTAGTCTGTTTGGATTTTTAGAAAAAAGAAATATTGAGGGCAACCTACTAAATTGGATGCACATGTGATGCTTCCGCGATTTAGTTAATTGTGAGATGACATGGATGGACTTGACGTTAATTTTGTCGTTGGGAGTTTTGGAAACTACGACATGTAGCGGAATGCATTAATTTTGTTAACCTTCTCTTTCGTGGGAAAAAACTATACAGTGTGCAGAAGCTGTTTATGTTTGTATATTGAATTTGCGACTATTGATCGTGTACTCAAAAGCATTAAGTTTATGTGTGTATACCGATTCTAGTACGGTTTGTATGCAGTCTGGTTTTGCATTTTGAAATTTTGTACCCATCTTTTAGGTGCAAGATTTCGTTCCCTTTGTTTCATTATTTGTTTTTGGGTGTTGAAAATTGATTGACCATTCCGATGCATTTGCACCTCTCTTCTGATTCCATCGTATGAAATGACACCGAGCCGAGGCTCTTCCTTCGAAGCCTCACTTATGTGGCAATTGCAGTGTGGCATGCTTTGTTTTGCTTGCTATAACTAGGCACCAAGAACCTAAAAACGTCACTGCATGGCATTGCATAAAATTATTAATTAAATGCCACAAAGTTCGTCGTCACATGGGATGATCGAGGGAGGGCTGTTTCTTTGAGAACTAGGGTTCTATTCTGCAATAGTTCTTGTTGCCTTTTCCTGTTTAATGTCTTCCACACCCATTTCACTTTTGATTGTGCCGGTGGTCTCAGGATCATGTCTGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACAAAGGATGGTAAGGCGGGGAGACATGATGGGAAGCATTACAGGTTCTTTCGTCAACTTGAAGCCTTGTATGGAGAAAACAGTAGCACAGTTTCAGTCCCAGAAACCAATGTTGTTGGCAGCATTCATTTTCAAGCAAGCAGCCATGACCCCTCCCAGACAAATCAAGATAAGTTTCAGTCTCACAATAGCAAGCATTGTGATAGCCTCAGCCTCACCAACTCCACTAACTTTGATACAACATCATCTGATGATGACAATGACCACCACAGTATGGAGAATGAGTCCATAGAGAAGAGGAGAAAGAGGAACAGTGGGAGGAGTTGGAAGGTGAAGATAAAAGACTTCATTGACTCACAGATGAGGAAGCTTGTGGAGAAGCAGAAGGAGTGGTTGGATAAACTTGTGAAGACACTGGAAGAGAAGGAGAAGGAGAGGATGTTAAGAGAGGAAGAGTGGAGAAAACAAGAGGCAAACAGGTTAGAGAGGGAGCAAAAGTTTTGGGCCAAAGAGAGAGCGTGGATTGAAGCCAGGGATGCTGCTCTAATGGAGGCTTTACAAAAGCTAACTGGAAGAGAAATAATGAAGCCTGAAACTCCCAATCATGGTATCAATGTAACGGCTGCTGAAGTTCAAAACCACAGTGAAAACCAGAATAATGAAGACGAGAGTGAAATCTTAAACAGCTGCAATGTTATCAGAGGTGGTGATAGGTGGCCAGAATCTGAAATTACAAGGCTTCAACAGCTGAGAGCTGAGATAGAGACAAGGTTTCCATGCAGCGAAATTTCTGAAGAGGTTTCATGGGAGGTAGTAGCAACCAAAATGGCTTGTTTTGGCTACGAAAGGAGTGCTTTGATGTGCAAAGAGAAATGGGAAAGTATCAGTAACTATCCAAGGGAGGGTGAAAAGGAAGGGAGCAAGAAGTGCAAGGAAAACACTAGAAACAGCATTTTCTTCAAGAACAATGATGATCATAGACAATCTTCCTTATACGACCAAGGAAGTGCCTACTGTGATGATATCAGTGATCAAGGAAAAGAGATTGAGAGGCTACAAACAAATAATAGTTCTTCACCTTCAAAATGCAATACCGGAAACGTTGATCCCTCTGATAGCTGCTTCCCCTTCTTGATGAGCAGTGAGGGTGGAAACTTGTGGGAGAATTACGGCCTAAAGCTCAACAAAGAAAACCAAAACCACTGA