Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28231 LG7 48347223 48352396 "hypothetical protein TSUD_220560, partial "
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 48347484 stop_lost p.Ter53Glnext*?
A/G 48347608 intron_variant
T/C 48347655 intron_variant
T/C 48348323 synonymous_variant p.His153His
G/C 48348326 synonymous_variant p.Val154Val
A/T 48348460 downstream_gene_variant
C/G 48348467 downstream_gene_variant
C/G,T 48348468 downstream_gene_variant
C/T 48348477 downstream_gene_variant
T/C 48348478 downstream_gene_variant
G/A 48348489 downstream_gene_variant
G/A 48348493 downstream_gene_variant
G/A 48348517 downstream_gene_variant
G/A 48348522 downstream_gene_variant
T/C 48348537 downstream_gene_variant
A/G 48348543 downstream_gene_variant
C/A 48348558 downstream_gene_variant
C/T 48348559 downstream_gene_variant
C/G 48348560 downstream_gene_variant
C/T 48348564 downstream_gene_variant
G/A 48348567 downstream_gene_variant
A/C 48348583 downstream_gene_variant
A/T 48348647 downstream_gene_variant
T/C 48348653 downstream_gene_variant
A/G 48348658 downstream_gene_variant
G/A 48348671 downstream_gene_variant
A/G 48348683 downstream_gene_variant
T/A 48348685 downstream_gene_variant
C/A 48348686 downstream_gene_variant
G/T 48348688 downstream_gene_variant
T/G 48348695 downstream_gene_variant
A/G 48348700 downstream_gene_variant
A/G 48348702 downstream_gene_variant
C/T 48348728 downstream_gene_variant
C/T 48348730 downstream_gene_variant
A/G 48348737 downstream_gene_variant
G/A 48348738 downstream_gene_variant
A/G 48348745 downstream_gene_variant
G/A 48348747 downstream_gene_variant
C/G 48348771 downstream_gene_variant
G/A 48348775 downstream_gene_variant
A/G 48348781 downstream_gene_variant
T/G 48348798 downstream_gene_variant
A/T 48348855 downstream_gene_variant
T/A 48348869 downstream_gene_variant
G/C 48348892 downstream_gene_variant
T/A 48348915 downstream_gene_variant
A/T 48348959 downstream_gene_variant
T/C 48349014 downstream_gene_variant
G/T 48349172 downstream_gene_variant
T/C 48349184 downstream_gene_variant
C/T 48349352 downstream_gene_variant
C/G 48349823 downstream_gene_variant
G/T 48350001 downstream_gene_variant
T/G 48350196 downstream_gene_variant
C/T 48350286 downstream_gene_variant
G/C 48350309 downstream_gene_variant
C/A 48350476 downstream_gene_variant
T/A 48350482 downstream_gene_variant
C/G 48350587 downstream_gene_variant
G/A 48350611 downstream_gene_variant
A/C 48350640 downstream_gene_variant
A/T 48350696 splice_region_variant&intron_variant
G/A 48350831 splice_region_variant&intron_variant
A/T 48350866 downstream_gene_variant
A/T 48350983 downstream_gene_variant
A/T 48351087 downstream_gene_variant
A/C 48351134 downstream_gene_variant
C/A 48351308 downstream_gene_variant
A/T 48351318 downstream_gene_variant
C/T 48351346 downstream_gene_variant
C/A 48351354 downstream_gene_variant
T/C 48351359 downstream_gene_variant
G/T 48351433 downstream_gene_variant
C/T 48351477 downstream_gene_variant
A/T 48351806 downstream_gene_variant
A/T 48351940 downstream_gene_variant
T/C 48352055 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28231.1
MPFGLVSAWNKRRRSKSQEHTDPWIYKPAQLWQLEDQTPRPTKRLHGSSVFTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRNILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLTIIYTNSKGLGMVMHTLRMI*


CDS Sequence:
>Vu_28231.1
ATGCCATTTGGTTTGGTCTCGGCCTGGAACAAGCGCCGGAGAAGCAAATCTCAAGAGCACACAGATCCCTGGATTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAGACACCACGACCTACAAAAAGGCTACATGGATCATCTGTTTTCACACTTAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGAGAATCTGCTTGGAAAAGGAGGATTCGGCAAAGTCTACCGAGGCACATTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGTTGCCAGCAATTAAAGCAGCAGAGGGGGAGCGTGAGTTCCGAGTCGAAGTTGATATCTTAAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAATATCTGATTTTGGTCTCGCCAAGTTAATGCCAGAAGGACAAGAGACACATGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGAAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGCCGAGCAGTGGATCTAAATCAAGGTCCCAACGATCAAAACCTTGTACTACAGGTGAGGAACATTCTGAATGACCGCAAAAAGCTTCGGAAGGTGATAGATCCAGAGATGGCTCGAAATTCCTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTTCGAACTGAGAGTAATGAGAGACCGTCCATGGCAGAATGTGTAAAAGAACTCCTAACGATTATCTATACAAATTCAAAAGGCTTGGGTATGGTTATGCATACTTTGAGAATGATCTAG


Promoter Sequence:
>Vu_28231::LG7:48345223-48347223(+)
TTTAAGTATAAAAATAACAGTTTTTCAACTGTTATCCGTGTATGATCAGAGTTGTGGTACCGCTAGTAAGTGGTCATTGTTAGCATAAAAGAGCATAAATGAATAACTAAACAAATAAAATATTTCAAGTGAAGGTTTTAAGAATAAAATGTTTGCTTATCCTTAGGACGTGTGCTGTTTTAGGCATTTTATCAGTGGATGTTGCCTTCGTGTTTATCTATTTTTGAGGTTTTTCTTGGGGTGACCTCGATCATTTAGCTTTTCATTAAGTTCTTCTACCTTATAGGCTCTCTTATAAAAGGGATTCATAATCGTTCTGATTAAGTGCAAGCTTTCCTTGTGCTTTATATTCAGAATTTCTCCATACTAGGTTTGTCTTCTGCTCCATTATTTCTTGGATCCAAGTAATGCAATGCCATATTGTAATATGCTACTATACTTGGATGCTAGAAAACCGAGTTAATTATAAAATGAGTATTCCTTAATGAATACTAGTTATATTTATAAGATCAACATGAGTCATGACCTATGTTCTTAGTAGAATAATACTTACTTCAACTATAAAATAACAATGTAGTTAATAATATTATAATGATACCTCATGAGAAATAATAACCACAATATCAAGCTATCAAAATTAGTTATGACATGTAAATGTTACTATAATAGACATAGGTTTGAACTGATTCATAACTTAATAGATCTTATTAAACCGTGCTCTTCAGTATGTCTATTGGATCGGATAAAAATAAATACACTATAATAAAAGCAACTATCAACTATATTATTCTAGAAACATGCATGCATTTTCTTACTTGAAAATATTTCTTTTATAACATCTAATAGACAAATATTATTGACTTGTAAATTTTTTTTTTAATTTACATACACGCTTTCAAATTCAAGCTTGTCAATTTCATTAATCCGAAAGTCAAAATGTAAAATTCAACTTACTCTTTTGGAGTCCAAAATATTATGGCTTTTATATTCAATGATCACATAGTAAAATCCAAAATATTTTGTTATTTTGTGTGTTGTACTTTGATCAGATTGAGATTAGAACTTTTGATCTGATACTTTCTACGAAACTCCCTGACGAAACTCCCTGAATAATCAACCCAACTGAACTCGAATCTGATTATTCTAAAATGAACAACTAAATGTATTTAAATAATAAATAAATAATTTTATTTACTAATGAAAAAATAAAAATAAGAATTACATTGTCATGACTTTACTTATTCTTATTTGTCCTCTGTCGTCACCTGAAAATAATAAAAATCCTCCTTTCCACATTTTCTGGCTATGATAGCTGACAAAACGTATTTAATGGCTTTGGTACCCACATAGATGGTCATGGATTATTATTGGTGCCAAATAAAAGCTTATTCAAATGATGATGATGACAAGCTTTAATAACAACAACGACGGTTGCACCATATGAGAGAAAAATTTGGAAACAAGATAACAAATTTTGCAATGAAGAGAACAAATGAAAAGGGCATTGCAACCGCCACTGATTTTCAAAATGCAAACGGTAACATGATGAACTTGGTGAATGAGGCATCGGTTTCCATTTCACCATCAAAGCAAGCCCGGCCCACCCTTACTATCACATCTCAACCATAGGTAAGCCATACCTACTTTTATCAGCTCTCTCTTTGCCTTAAAGTACATATTTTTGTCTCTCTCCTTCTGCTGTTGTTGGAAGATGTTCTGTCAATGATTCTAATCTAGCTTCACTTGATCCACACGTACCCCCATTCACAGAGGTTTTCCATTCTATCAAACTGCTTTTTATATGGGAATATAGCTTTCTCAGGCATGCTAGCTATTCTAGAGTGATTAATTGTGGAGTAGTTTACTTCAAGTTTTTCACAGAACCACCTGTATCTCAGTGTGTAAATCAATTGGTCATTTATATGCAATTGTATGTTGCTTGTTAGGGCCTGACAATTCATTTCTCAAACAGAGAACATATAAGATAGAGCAATCAATCA


Gene Sequence:
>Vu_28231(+)
ATGCCATTTGGTTTGGTCTCGGCCTGGAACAAGCGCCGGAGAAGCAAATCTCAAGAGCACACAGATCCCTGTAATGGCTCTTTATTGTGTTTCTCCCTCATGGTTTAAGCCTGTACTTTAGATTGTTTTTATTGCATAACCAACGAGTAACATTTACAAACTTTCATATTCAGGGATTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAGACACCACGACCTACAAAAAGGCTACATGGATCATCTGTTTTCACACTTAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGAGAATCTGCTTGGAAAAGGAGGATTCGGCAAAGTCTACCGAGGCACATTGCGGTCAGGAGAGGTAACACAGAAGTTTATTGCCCTTAGGAATTTGAATTCATCATAGTTCACAAGACTTTGTAACGTCGGTTATAGCTTTCATACAGAAATCATGTTTCTTATAAAATGCTCAAAATTAGTGAATTTGATACAGATGAATACATACTAATACAACAAGTCTCCTTCTGAAGGTTGTAGCAATCAAGAAAATGGAGTTGCCAGCAATTAAAGCAGCAGAGGGGGAGCGTGAGTTCCGAGTCGAAGTTGATATCTTAAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCGTAATGGAAACCTGCAAGATCATTTGAATGGTTTGTCATTGACCCAAATCTATGCTATTGGCATAATTTTTAACGTCGAGATTTTATTAATTAACATCTAATTTTAGGAATTGGGGAAAGAAACATGGATTGGCCTCGAAGACTCCAAGTTGCACTGGGAGCTGCAAAAGGGCTTGCTTATCTTCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAGATGACAACTTTGAAGCAAAGGTAAATAGAGTCTTTATAGTGACTTCAACAATTCATTATCACAATCATATGTACAGAGATAAAATTTACATCTTTTGTAGATATCTGATTTTGGTCTCGCCAAGTTAATGCCAGAAGGACAAGAGACACATGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGGTATGCATCTATACCATAAAGATATTTTAAAAAAAGCAATACTTCATTTTTTCGATTTTTGTTAGAAGTAGACTTTAAGCCTAACTCAACCCCACAAAACTGGCTTTTAGGGTGAGGTTTGCACCCACTTATAAAGTATGAATTGGCCTTATCTCTAGTTGATGTAGGACTTCCAACACACCCCCTCACGCCGAGGTATATACATATCGAGTGTGGGATTAGACATTTTTAATGGGTGGTCCGATAGCGGGTGGAACAATATGCCCAGCAAACAATAAATATCGCTAGGATAGGCTCTAACCATGACTCTGATACCATGTTAAAAGTGGACTTTAAGCCTAACTCAACCCCACAAAACCAGCTTGTAAGGTGAGGTTTGCACCCACTTATAAACTATGAATTGACCTTATCTCTAGTCGATGTGGGACTTCCAACAATTTTCAATGCCTTAAGATAATAGTATACACTATTAAGGTAAAATGAAATTTTGCTTTGCAGCAAGGGTAAATGTATTGTGCACATTATACTAGTGCAATTTTTCCAGTATAATGTGCACAAGGTGAAAACAGCTCCACATGTTAACATCGAGTTATTGCTACAAAGTAGGTCATTTGCGCAATATACCCAAATTTTCAATTCCTTTTCATCTCATGCATACTTATTCAACCATGTGTGAATATGGAGATCTTAATCCAGAGCAGGGTATATCAATGGTTGAACAACACCAAAGCAGTAAATACTAGTTACTTGTTAGCAGTTTAGGCCACCAAAAAATAAATCACCCATGCAAATTAGGTCAGCAAATTTAACACCAACATAAGAAAAATAGTATAACCCTTGAAATTTTGATTCGCATTAGAAGCCTAAGGCCCGAAAAAGTCTCTCAGTTTTCTTATATGGTTTATTAGGTTATTTACTACTAGGGTGTTGCTCCCTCCACCTCCACAGCCTTCTCCCTCCACCTCCCCAATTATCTTTAATTCCAATTATATCCTTAAAGTTAAAATTTTTTATTTTTATTATTTTATTATTTTAATATTTTAATATTTAAATATAAACTAATATAAATATACATTATTAAAATACATTAAAAAGATATTCAAAAATAATAAATCAAAATATTAAAATATCTAATAAAATAATAACAGAAACATAAAATTAAAACAAAGCTTAAACGGATGACATCCTTCAACGGATGTCAACATCCGTTTAAGACGAAACGGATGTCGACATCCGTTTTGCCTTAAACGGATGTTGACATCCGTTGAAGGATGTCATCCGTTTAGGCTTCGTTTTCATTTTACGTTTTAGGGTTAAAGGATTATTGGAAAGATTATTGGAAGGATTATTGGAAGGGTTTAGGGTTTAGGGTTTAGGATTATTGGAAGGATTATGACTACGTACCTGGAGAGGAACCACGACAAGCACATTACACCACAAACGCACTGCACCATGTACTGCACCGAAAGCAAGAGGAAGATTGCTTGATAATTCTTTTTACGATCACTGAGCTTTGCAGAAAAATATTTTACTCATACAAGGAACTAAGTAGGTTATCAGTGAAATATGTTATAAATGAGTAAAATTAAAAAATAATAATTCTAAAAATAAAATTTTAGTGAGGGACAAAATAGTAAAGGGGAGGTGGAGGGAGAAGGCTGTGGTGGTGGAGGGAGCAACACCCTTACTACTAAATGATTCAGAGAATTTTGTTATAACCAGAAGCCCAACATTAGACTTAACAAGTCATTTGATTTTAACGATTGTCTAACCATAGGAAGAGGCCTTTTTATAATAGCCCATGCTTTTAGATCAAGATGTTTCAGGAGCAAAACCCATACCACCCGTGGACATGTTCTAGTAAATAACATTCCATGTATAAGTTCAAAGCAATTTCTTCCCTCAATCCTGATCAACATTTCCAGCCTGGAGGACTTTCATGGGCGGTGTCTTTACAAGTTATTAAAATTGTTTCTCTGTCTTTACCTAAATGCTTAAATTCCTAAAGTCTTGTATACCTATGCATTTTCTCATCACAGTTATATAACGCGGCTTTTTTATGCTGCTAGGGGAATTTTTAGCATAAATTAGCATGATTCAATTCTGCCCGCGATACTTACAACCAAATATTGTTACCCAAATTGATATTGCCAAATAAATCATTCATTCCATCATCTAAGAATGCAGCATAAGAAGCAGTTTTATTTCTCAAATCAGATGTGTCTATCCCAGAGTGCTATCTTGCAATCTTATATCTAGTGGAAGCGAAATGCTAAATACGTGTTCTTACACTAACATTGTTAAATATTTCATTTCACAACAGACTGGAAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGCCGAGCAGTGGATCTAAATCAAGGTCCCAACGATCAAAACCTTGTACTACAGGTAGGACGTACTTTCAGCGTCGATCCTTATGAATGTAAAGGCAACATATAAGCCCCGAAACTCAGTACTATATTTTTTTATATTTCATTAAAAGGTTACTAGGCGCTATTTTTTTTTATAATAATCTTATTAGATAATATTAATAATAATAATAATAGTAATGAATTTGAGAAAAAAAAGGTGGTATTGGGAGAAAGTCATAGTGACGACAGTACATCAGATAGAGGATAGTTTAATCATTGGAGGCAGAGAAAGGCTGGGAGAAACTACAAGCAAAACCATTAAAGATGCAATAGTCAAGAGTTGTCTAAGGACATGATCAAAAAATATTATAGAACTGTTTGATTAACTAATAGGTGGGAAAAGGCTAGGTTGTTGTCATTGATGCATTTAAAAAATAATCAAGTGAGAACTCTTGTTTAATGAGTCACAAATAAATATTAGAACCGTTAGATCTTATAATAAATGGTCAATATTAAAAATACATGTCCTAAAAACCTTTTAGTCTTGATGATCTATGAACGGTTGTACCGTATGCCTCAGGTTTGCACCTCTCACTCTCAAAAAAGTAACTTTCTTACTAGAAATATTTGTATGTGTAAAGTGAGAGAAATAGTTAACGTAAGAGTGATGTGACTTTAGTTATAGAAAACCTGTAACGTTCACCAGCCATGAGACATTCAATGCTCAATCTCAGCTCTCCTCTTAACAAGATAGTATTTTCACTTGAAATACCCCCAACCCCCGTCACACACATGTTCAAGAATTGTAGATTCATCCAACCACTACCAATCATATTTGACCTCTGCTAGTAGTGTGGAATGAATATCGGAAACAAACTGGGACGCATAGCCTAAGTTTAAAGTACGAAAAAGAAACAACATGGGCTGTGTCCTTAGCAGAAAGGAATGAACCTCGGAAACAAACTGGAACGCATGAAAGAGGAGGGGAAATGAGAAGGGCGAGGAACAGCATACCATGCAAGAGGCTATTTAGGTTGTTAACAAACAGGCCAGCTGGCACAATTCTATTGGAGAGGAAGATTCTGGTATCATGCATGACAAGAATGTGAAATAAACGTGAGGAAGAGGAAATATGAGAGGTTTATGAAATTGTAGAGTGACTTGGGACAGGTTGCGTGTTCCCTTGGCATTTGGGACCATGTCGTAACCTGTTTCTAGATTTTCTTTCCATGCTGTTGTACTTTTCTAGAGCGAAAACCTTGGAATCCTAGTTAATATCCCTGTTTTATTGTTCTGTTATATAGAGCCTTATCATTGAGAATCACTAGATTCATAAAGCTGGAAGACTTTAATTCATTATCATTCCTATGCAGGTGAGGAACATTCTGAATGACCGCAAAAAGCTTCGGAAGGTGATAGATCCAGAGATGGCTCGAAATTCCTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTTCGAACTGAGAGTAATGAGAGACCGTCCATGGCAGAATGTGTAAAAGAACTCCTAACGATTATCTATACAAATTCAAAAGGCTTGGGTATGGTTATGCATACTTTGAGAATGATCTAG