Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28191 LG7 47502146 47506015 PREDICTED: proline-rich receptor-like protein kinase PERK13
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 47502469 downstream_gene_variant
T/C 47502563 downstream_gene_variant
T/A 47502684 missense_variant p.Lys599Asn
A/T 47502718 missense_variant p.Val588Glu
T/C 47503141 downstream_gene_variant
A/T 47503237 downstream_gene_variant
A/T 47503315 downstream_gene_variant
C/T 47503322 downstream_gene_variant
T/C 47503649 downstream_gene_variant
C/T 47503711 downstream_gene_variant
C/A,* 47503718 downstream_gene_variant
A/T 47503725 downstream_gene_variant
C/G 47503744 downstream_gene_variant
T/C 47503820 downstream_gene_variant
C/T 47504048 downstream_gene_variant
A/T 47504318 downstream_gene_variant
G/A 47504484 synonymous_variant p.His404His
G/T 47504496 synonymous_variant p.Gly400Gly
C/T 47504551 missense_variant p.Gly382Glu
C/T 47504642 missense_variant p.Gly352Arg
C/T 47504676 synonymous_variant p.Arg340Arg
T/A 47504753 stop_gained p.Arg315*
C/T 47504765 missense_variant&splice_region_variant p.Ala311Thr
C/T 47504807 downstream_gene_variant
C/T 47504810 downstream_gene_variant
G/A 47504812 downstream_gene_variant
T/C 47504871 downstream_gene_variant
G/A 47505013 intron_variant
A/T 47505080 splice_region_variant&intron_variant
C/T 47505087 splice_donor_variant&intron_variant
G/T 47505093 missense_variant p.Pro308Gln
T/A 47505095 synonymous_variant p.Thr307Thr
T/G 47505129 missense_variant p.Tyr296Ser
G/C 47505131 synonymous_variant p.Pro295Pro
G/A 47505137 synonymous_variant p.Ser293Ser
A/G 47505140 synonymous_variant p.Tyr292Tyr
G/A 47505217 missense_variant p.Leu267Phe
A/T 47505222 missense_variant p.Leu265His
G/T 47505295 missense_variant p.Pro241Thr
A/G 47505299 synonymous_variant p.Ser239Ser
C/A 47505346 missense_variant p.Val224Leu
C/T 47505349 missense_variant p.Gly223Arg
G/T 47505586 missense_variant p.Pro144Thr
G/T 47505673 missense_variant p.Leu115Ile
G/A 47505920 synonymous_variant p.Asp32Asp

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28191.1
MANESSSNGSPMSDFITASPPPPSLSQQSSDDAESPPSSEPPPQPSQSSPLPSPSTSPPPPEISSPPPTVPPPKKSPPPAPENSPPPPTSVHSPPPSTPSTSPPPTPSTSPPPPLSPSPPPPDQSSPPPKSSPPPPSPRRSAPPPSLTPPPRSQPSPSPSPPPPQPSLSPPPPSPQSYVPPPQFLRPSTPTAIPPSPVFRITSPPLQTAPASTPHSQLRPPPGVPPGILPAIPPILHMSAPQKSNLPPVSPSSSGNNSTGQIVGLALVGVFIIAFLAMVIFFLLRNKRENNYSAPYPGKSNIRGAGTPGDVHYFVEEPGFGNGAQQGGMHIRSPSDPALSGGQLVFTYEKIAEITNGFSSENIIGEGGFGYVYKASMPDGRVGALKMLKAGSGQGEREFRAEVDTISRIHHRHLVSLIGYCISEQQRALIYEFVPNGNLNQHLQGSEFPVLDWSKRMKITIGAARGLTYLHDGCNPKIIHRDIKSANILLDNAYEAQVADFGLAKLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPMQPLGEESLVEWARPLLLRALETGEFGELVDPKLQQQYIDKEMSKMIEAAAACVRHSALKRPRMVQVLRSLDNGDQLYDLSNGVRYGQSTVYNSGQYNEDIARFRKMVNGSFDDSEFDNLSSEFRSTVSREMVELNSASISHSPRNSDSQFKVFHHQRSQTQNRS*


CDS Sequence:
>Vu_28191.1
ATGGCTAACGAATCCTCTTCAAATGGCTCGCCTATGTCGGATTTCATTACGGCTTCGCCTCCGCCACCGTCCTTGTCGCAGCAGTCATCGGACGACGCAGAGTCTCCGCCATCCTCGGAACCGCCGCCACAGCCTTCACAGTCATCGCCTTTACCATCACCGTCAACGTCACCACCACCCCCAGAAATCTCTTCTCCGCCACCTACCGTACCTCCGCCGAAAAAATCTCCTCCGCCGGCACCGGAGAATTCGCCTCCTCCACCAACGTCAGTTCATTCACCGCCACCATCAACTCCTTCTACTTCTCCACCACCTACCCCTTCTACTTCTCCACCACCTCCCCTTTCTCCGTCGCCACCTCCGCCAGATCAATCTTCTCCCCCGCCAAAAAGTTCTCCGCCTCCTCCGTCACCAAGACGTTCAGCTCCACCACCTTCTCTCACACCGCCGCCACGTTCACAACCGTCACCATCACCATCACCGCCACCTCCACAACCGTCACTATCACCGCCACCTCCATCACCGCAATCTTACGTTCCTCCTCCACAGTTCCTTCGGCCTTCAACTCCAACCGCAATTCCACCTTCACCGGTTTTCCGTATTACCTCGCCGCCGCTGCAGACAGCTCCAGCGTCAACACCCCATTCACAACTGCGACCACCACCAGGAGTACCACCGGGAATATTACCAGCAATACCTCCGATTTTACATATGTCTGCTCCCCAGAAGAGCAACCTTCCGCCGGTGTCTCCAAGCTCCTCCGGTAATAATAGTACAGGACAGATTGTTGGTCTTGCTCTCGTCGGGGTTTTCATCATTGCCTTTCTTGCTATGGTTATTTTCTTTTTATTAAGGAATAAGCGAGAGAACAACTATTCCGCGCCCTACCCTGGAAAATCTAACATAAGAGGAGCCGGTACACCAGGAGATGTGCATTACTTTGTAGAGGAGCCTGGTTTTGGGAATGGAGCACAACAAGGTGGCATGCATATAAGATCTCCTTCAGATCCGGCTCTGAGCGGTGGTCAGTTAGTTTTTACCTACGAAAAGATTGCGGAGATCACTAACGGGTTTTCCAGCGAAAACATCATAGGGGAGGGGGGATTTGGGTATGTTTACAAGGCTTCCATGCCTGATGGTAGAGTGGGGGCGCTTAAGATGTTGAAGGCTGGTAGTGGGCAGGGAGAAAGAGAGTTCAGGGCTGAGGTTGACACTATCAGCAGAATCCATCATCGACATTTGGTTTCACTGATTGGTTATTGCATATCAGAACAGCAAAGAGCGCTCATCTATGAGTTCGTTCCTAATGGGAATCTCAATCAGCACTTGCAGGGAAGTGAATTTCCAGTTTTGGATTGGTCCAAGAGGATGAAGATAACAATTGGTGCTGCAAGGGGCCTGACATATCTTCATGATGGATGCAACCCAAAGATTATTCACAGAGATATTAAATCGGCAAACATTCTTTTGGATAATGCTTACGAGGCACAGGTTGCAGACTTTGGGCTTGCAAAGCTAACCGACGATGCTAATACTCATGTATCAACTAGGGTGATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCTTTTGGAGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCTGTTGATCCAATGCAGCCCTTAGGAGAGGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCACTTGAGACAGGAGAATTTGGTGAACTAGTAGACCCTAAGCTTCAACAACAATACATTGACAAAGAAATGTCGAAAATGATTGAGGCAGCAGCAGCATGTGTTCGCCACTCTGCTCTAAAGCGACCTCGTATGGTTCAGGTGCTAAGATCCTTAGACAACGGTGACCAACTATACGATCTTTCAAATGGGGTGAGATATGGTCAGAGCACTGTTTATAATTCTGGTCAATATAATGAAGACATTGCAAGATTCAGAAAGATGGTTAATGGAAGCTTTGATGATTCTGAGTTTGATAATCTCAGCTCAGAATTCCGTTCAACTGTTTCAAGAGAAATGGTTGAACTCAACTCTGCAAGCATATCACATAGTCCACGAAATAGTGATTCACAATTTAAAGTTTTCCACCACCAAAGGAGCCAAACCCAGAACAGGTCTTAA


Promoter Sequence:
>Vu_28191::LG7:47506015-47508015(-)
TTATTTACTTTTATTCTTTACCTTTTTAACTTTTTTTTTAAAATTCTATTTTTTACTGTGTTATTCACTCAGTCGCACACCACACTTCCATCCCCACACTCTTACTTTCTCTCTTCCTCTCTTATTCTCCTCTTTCTCTTTTCCCAATTTTCCATTTTTCCTCTTTTCCCAATTTACTATTTTCGTCAAGGTTCTCTTCTCCTTTGCTTGATTTGTGTTGGTGCTTGGTTGGTGGTGGGTTCATGTTGTTGCTTGATTCATGGTGGGTTCATGGTATTGTGGAGTTTGGTGCTTCCTTTGTTGTTGTCTCTGATTCAGGTTAGTGATTTTATATGCGTTTCTATTTTGTGTTAAACAAAGAAGAAAAGAAACGCGAAAGACTACAACGGATATGAGACATCCGTTGAAGCCTTTCAACGTTTTGGGTGTTTTCGTCCGTTGAAGGTCCAACGGATGCCTTATGGTTTGGTTTTCTTGTATTTTTTAGGTTATTAATTTAATTTTATTTAGGTTGTTAATTTTTTTACATTTATTTTAATTTAATTTTTTATGTAGTATTATTTATTTATAAATAAAGTGTTTGTAAAAAAAATAAAAGAAAGTATGGAAAGTTGAACGGATTTACTTATTTTTTATTTTTATTTTTTAGTTTATTAATTTATTAATTTGGAAATTAATTTTTAGATAGTTTTAAAGTCAAGTAATTATATTTTAATTATAATTATATTTTAAGTAAATTATGTATTTATAATTTTTTTTATTTAATGAATTAATTATTATTAATTTAATTAAAGTTAATTGATTTTGTTTTGAATTGTTTTATTTTTAAAGAAAAATAGGGAAAAGGAAAAGAATAGAAATTTGATTTCCGTGGGAGTGGTAGAGCGTGAGGGTGTATTCAATAATGAAATGAATGGAAGTTGGAGAAAGTTAAATTTTTTAACTACTATGGAAGGTAAAAGAAGAATGAAAAGGTGCGGAAACCTCTTAAAAGTAACTTTATTTATCTTATATTTTAGTACAGAAACAAGTAAAATATATGCATGTTAATAATATATATTTGTTAGAGAAACATTATTTTCATTTCATCTCCCAATACACTGCTAAAAGAACATTTTATTCTTTTACAAAACCAAATGTCAATATTTGATAACTGTCTTTTATTTTAAAATAGGCAGATTTAGCTAAATTCAATATATAAAATATAATTTATTTTCTATACTTATAACATGAGTTTTTCTTACTGCCTATTGCTCCAAACAATACACTTAAATATAAGAATTAATATTTAACAGAAAAATGCCAAATATTTTGTTGAATATTATTTAATAAAATTATATTTTTATTATTTTGTGTATGTTATAAAATATTAATAAAAAATTTTGACTATAATTTTAAAAATAATGTCCTATAAGGATTTAAAATCATCATTGAAGGTATAAATAATATATAACAGAATATTAAGTTTCCAAAATCCTTGAAGAGTCCGGTGAAACAGTAGGTAACCCGAAATTGGAGGAGGTAAGAATGACAACACAAAAAGCAACGTGAATCTTTGCAAACATGAAATGCAACTAACTACCTAAATTAATGCTAAGGAAGAATGAACGTTCATGACTCATGAATGTTTTGCATTTGCCTGTTGCAGTCTTCACCGATTCTCCAATTCAATTATTTTTCTCCTCCATTTCAGAAGCGCACCACACAGAGAGCTAGCTCTCTGAACGCGTCGAGCCAATTTCGTTTCCCAGTTTCAAGGATTCGCGGGTCAAGAAGACTTCATCACCCCAATTCAATTAAATGCCATTTTCTAAAGAACAAGAACTCATGTTGTTGTTTTTGCTGCTCTTTCTGCTTTGATCGTCTCAAATGCCAACCTCTGTTCTGAGAAACTGTTTCGAGTTATAATCTCATTGGTCCCATCGGCATTCCCATTGTTTTTTTGAATTTTCTTGCCATTTCTGAGTATCATCAGCTTCAGATTTAATAGAGAATCAGAA


Gene Sequence:
>Vu_28191(-)
ATGGCTAACGAATCCTCTTCAAATGGCTCGCCTATGTCGGATTTCATTACGGCTTCGCCTCCGCCACCGTCCTTGTCGCAGCAGTCATCGGACGACGCAGAGTCTCCGCCATCCTCGGAACCGCCGCCACAGCCTTCACAGTCATCGCCTTTACCATCACCGTCAACGTCACCACCACCCCCAGAAATCTCTTCTCCGCCACCTACCGTACCTCCGCCGAAAAAATCTCCTCCGCCGGCACCGGAGAATTCGCCTCCTCCACCAACGTCAGTTCATTCACCGCCACCATCAACTCCTTCTACTTCTCCACCACCTACCCCTTCTACTTCTCCACCACCTCCCCTTTCTCCGTCGCCACCTCCGCCAGATCAATCTTCTCCCCCGCCAAAAAGTTCTCCGCCTCCTCCGTCACCAAGACGTTCAGCTCCACCACCTTCTCTCACACCGCCGCCACGTTCACAACCGTCACCATCACCATCACCGCCACCTCCACAACCGTCACTATCACCGCCACCTCCATCACCGCAATCTTACGTTCCTCCTCCACAGTTCCTTCGGCCTTCAACTCCAACCGCAATTCCACCTTCACCGGTTTTCCGTATTACCTCGCCGCCGCTGCAGACAGCTCCAGCGTCAACACCCCATTCACAACTGCGACCACCACCAGGAGTACCACCGGGAATATTACCAGCAATACCTCCGATTTTACATATGTCTGCTCCCCAGAAGAGCAACCTTCCGCCGGTGTCTCCAAGCTCCTCCGGTAATAATAGTACAGGACAGATTGTTGGTCTTGCTCTCGTCGGGGTTTTCATCATTGCCTTTCTTGCTATGGTTATTTTCTTTTTATTAAGGAATAAGCGAGAGAACAACTATTCCGCGCCCTACCCTGGAAAATCTAACATAAGAGGAGCCGGTACACCAGGAGGTAAAGCTTATATTTTCTGCAATCATCTTCGTTGTTATTGGTGTTCTAACCAGTTCCCTTCTGCACAACCAAAACCGAAAGATGAACATCAAAACTAATAACAAGAAAAGTTATTGTCTTTTACAATTACCACTTCAAAAGTGATATGTTTTATAATTTGTAGCAGTTCTTTAACTGTATATATATACTAATTTTAACTTTTTCTTGGAGAAACTCATTCCATTCTTCTTTATTATTTTTTTTAGAAATCTTTACGGAGAAGAACCCAAACATACCTGTTGTTATCATGTCTAATGATTTTGGTGTGATAAAGTGCAGATGTGCATTACTTTGTAGAGGAGCCTGGTTTTGGGAATGGAGCACAACAAGGTGGCATGCATATAAGATCTCCTTCAGATCCGGCTCTGAGCGGTGGTCAGTTAGTTTTTACCTACGAAAAGATTGCGGAGATCACTAACGGGTTTTCCAGCGAAAACATCATAGGGGAGGGGGGATTTGGGTATGTTTACAAGGCTTCCATGCCTGATGGTAGAGTGGGGGCGCTTAAGATGTTGAAGGCTGGTAGTGGGCAGGGAGAAAGAGAGTTCAGGGCTGAGGTTGACACTATCAGCAGAATCCATCATCGACATTTGGTTTCACTGATTGGTTATTGCATATCAGAACAGCAAAGAGCGCTCATCTATGAGTTCGTTCCTAATGGGAATCTCAATCAGCACTTGCAGGGTGTGAGTTTCTGTTTTTTTTTTTTTAAGAAATGAATTTCTTGTTTTGCTATGTTTATGAAGTGATTATCATGTCATAATTGGTCGTTTGTGCCCTGCTCCTCACAGGAAGTGAATTTCCAGTTTTGGATTGGTCCAAGAGGATGAAGATAACAATTGGTGCTGCAAGGGGCCTGACATATCTTCATGATGGATGTAAGTTTATCTTGCATTTGTGCTATGAGATTATCTTTTCTAACACACAATACATTAAAGCAATTGATAGAAGCCATTTTCTCTAGAACATGGTGCCATTTTACTAGAACAATTAATAGCGGGTCCTCTACAACTTAGATTCTAATGTGCTTGGCGTTCAAAAGGTTGTGCAAAGGGCATATAACTAAATTAGATATGCCTGTTATCCTTGTCAATTCAGTCAAGATTTTCTTTTGGCCCAATAAACTCCTTTTCTATCCTTTTCTCAACTAAACTCCGGGGCTGACAATTTATTAATTTTTACATTGTTATCCTCACTGTGTATTATGTTTGACGAAATTTACTTAAAGAGTATAATAGAATTGGAGAAAAGTTTTCTATGGCAGAGAACTGGCTGAAAGCTCAGGAGATCTTAAAATATGATTTGATTTTAAATCTGTACACTTCATTATGAAGTTCGTACGAAACTTAAAGAATTTCCTGTATTTTTTTAGTCTTGTCTCTTTAAGGTTCATTAATCAAAAGATAAGAGGGATAGTGGCCGTGCTAGATTTTGTATACGTTTCTTCAAGCACAAGTAACACTAAGTGATAACAAATCTTGTATAGTTTTGAAGAAAACTAAAGTATTTTATTTTTCCTAGGCAACCCAAAGATTATTCACAGAGATATTAAATCGGCAAACATTCTTTTGGATAATGCTTACGAGGCACAGGTTGCAGACTTTGGGCTTGCAAAGCTAACCGACGATGCTAATACTCATGTATCAACTAGGGTGATGGGGACCTTTGGGTAGGTTTTCTCTATCTAAAACATAAAGAAGTACATTATAATAATATATGGACATTCGTGAAGGTTCTCACTTGCTGTCAAAGTTGAAGCAACCTCTTTAGTTCTATTCTGAAAATACACAGAATTATTTTTAGCTGAAAATTGAAATTGTAATTTGTTCAATTATTGTTGTTTATCACTGTTATTTTGGAAGCCAAGTAGACATATCTCTTTGAACTGGCTCTTTTTAGGAGGTTTGAGTATATAGTGGAAAAATATCAGAGAAAACCTTCAATAGTGCCAAATGCTGAACTGACATTCTAACTCATGCTAGCTTCAATTTGCAGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCTTTTGGAGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCTGTTGATCCAATGCAGCCCTTAGGAGAGGAGAGTTTGGTTGAGTGGGTACGTCTGAACATTATTCTTAGTTTATGAAATAAAATACACTCAAGTTTTGAATTTGGTTAAATTAATCGTTTTTTACATGATCAATCGCCTTAAAAAACGTTCACCTCAAATGATGTTTTCCTCTCTCCACAGGCTCGTCCACTTCTCCTTCGTGCACTTGAGACAGGAGAATTTGGTGAACTAGTAGACCCTAAGCTTCAACAACAATACATTGACAAAGAAATGTCGAAAATGATTGAGGCAGCAGCAGCATGTGTTCGCCACTCTGCTCTAAAGCGACCTCGTATGGTTCAGGTGATAACAGTACTAGACAATTTGAACTTATTTTCGTGTTCATGAAAACCTCCATACCTATTAATCTTTTTTTTTTATTTCTCAAAATAATTGACACAGTTATTTGCCTTTATATCATTTCTATCTTAAGTTGTTCAAAGCATTGTCCATTGGTTTTTCTCAGGTGCTAAGATCCTTAGACAACGGTGACCAACTATACGATCTTTCAAATGGGGTGAGATATGGTCAGAGCACTGTTTATAATTCTGGTCAATATAATGAAGACATTGCAAGATTCAGAAAGATGGTTAATGGAAGCTTTGATGATTCTGAGTTTGATAATCTCAGCTCAGAATTCCGTTCAACTGTTTCAAGAGAAATGGTTGAACTCAACTCTGCAAGCATATCACATAGTCCACGAAATAGTGATTCACAATTTAAAGTTTTCCACCACCAAAGGAGCCAAACCCAGAACAGGTCTTAA