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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27951 LG7 42996705 42998128 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
T/C 42997564 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27951.1
MEPDWDLHAVVRSCTTTSSAAAATTTVSTTSSDFGASVPPSTSGSFFSVYNPAVQGGQVVSPLENPYGARPSIEELHELCKPFFIKPQLHTFQPSSPLSPFSYSSVSKSPCSQQEQKQPPQPGSASTPKQKRRKNQVKKVCDVAAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNKSDPTMFIVTYTGEHDHPAPTHKSSLAGSTRYKPQTGGDTTTTKPVSPATSSEVAQHSTKSECIEEELEDLMKDDEEANEFDSTETVVSDDFFEGLEELTGSAIDPFTATSTIDRWSLANNATTAAGGS*


CDS Sequence:
>Vu_27951.1
ATGGAACCAGATTGGGATCTCCACGCCGTAGTCAGAAGCTGCACCACTACTTCCTCCGCCGCCGCCGCCACCACAACCGTATCCACCACCTCATCTGATTTTGGGGCTTCTGTCCCACCTTCTACTTCCGGCAGCTTCTTCTCTGTTTACAACCCTGCTGTACAAGGAGGTCAAGTTGTGTCTCCTTTGGAGAACCCCTATGGAGCAAGGCCTTCCATTGAAGAGCTTCACGAGCTTTGCAAGCCTTTCTTCATCAAACCACAGCTTCACACCTTCCAACCTTCTTCTCCTCTTTCTCCCTTTTCTTATTCATCAGTGTCCAAATCACCTTGTAGCCAGCAAGAACAGAAGCAGCCTCCCCAACCAGGTTCTGCCTCCACCCCAAAACAGAAAAGAAGGAAGAATCAGGTTAAGAAGGTTTGTGATGTGGCAGCTGAGAATCTCTCCTCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGGTCACCATATCCAAGGGGATATTACCGATGTAGCAGCTCAAAAGGATGTTTAGCCAGAAAACAGGTGGAGAGGAACAAATCGGACCCAACAATGTTCATAGTGACATACACTGGTGAACACGACCACCCTGCTCCTACTCATAAAAGCTCCCTTGCTGGCTCCACTCGCTACAAACCTCAGACTGGTGGAGACACAACCACCACAAAACCTGTTTCTCCAGCGACCTCATCAGAGGTGGCACAACACAGTACAAAGTCAGAGTGCATAGAAGAGGAGTTGGAAGATCTGATGAAAGATGATGAAGAAGCAAATGAATTTGACTCAACAGAAACAGTGGTATCAGATGATTTCTTTGAAGGGTTAGAGGAACTGACAGGGTCTGCCATTGACCCCTTTACAGCTACTAGTACCATTGATCGGTGGTCACTGGCCAATAATGCTACCACTGCCGCTGGTGGTAGCTGA


Promoter Sequence:
>Vu_27951::LG7:42994705-42996705(+)
TGAAGATTTCTAATAACATGGTAAGGGAAGAAAAAAATGAAATGTGATGTATATTTCTTTTTATTAAGTCATTTTGTTCATTACAACTTTGGAGGTCACATATACTTAAATTTATTTTATACTATATCAAAATTTATTTTCTCATATGATATATTATTGTCTATTCTAGTACTAGTCAGATTTGTTGAGTCAAGCTTATCATATCATCTTGTATTATGTTTTATGTAAGTGTAAGTTTTATTTTAAAAATCATATTTCTGGAGTGGAGTTAGAGTTCAAATTTATTTTTTAATACAAAATTTGTTATATGAGATTTGTGGATTTATCCCATTTTACTGATATTCCTTTTATTTTTCATATTTTGATAAATTAATTTGTGAGATTAAGTTATATTTTAAATTTCTTTTCATAAAATAATATAAAATTTATTAATACTTATTTTAGTATGATTTATTGAATTATTTGATATTTATATTTTCGAAATCAGGTAATCTAAAATAATGTATTGAAGATTTCTCATTCATTAAATATATAACCAAATATACACATATTAAACCTCAAATTTTAGTCAAACAAATTTTTACTGTCAATTTTTTTATTCTCTAGCTAAGTTAGCTCTGTAATAGACAACACAAATTTTCAGCATACTCTTCAAAATTATTCTTAATAGTACTCGATAAACTCTGCACATAAACTCACTATAATAAAAAATATTCTAAAATAATATTTTTTTTGCCGAAGTATTTTTCTCTTTTGAATTTTCTCTTTTGCAGGTAGTACATGCATCAATCCAATTACTACCACTAAAATGAGATTTTCTTTTTTGCTGAATGTTTTTCACTCATTTTTTCTTTTTATAGCTATTTTTGTATATTGATGAATTTCCCTAAAAGTTCTCATACTAGTTATTTTTGGAGAATATTTAAACTTGAGAAAAAAACTTCACGACTATAGTCTTCACAATTGAACTAATTACCAATCCTTATTTTGCATAGAAAATAGACTAGATAAAACAATTTTTTTTAATTTTATATTTGTATAAAAAATACCTGTATAATGTTATATTTAATTAATTTTTTAAATAGTTATTTATAAAAATTATTTTCTTGTCTTTTGTCTGAAATAAGATAAATGTTAATTAGTATTCTTAAAACGATTAAAAAATTAGTCATATGTAAAAAAAAATACATTTTGAATAATTTTTAATTAAAATCCTTCCCTTCAATAGTATGATTTTTGTTTCTCTTCCTTTCATTCTATGTGTTTTTTCACTTTCATCTCAAGAAGTTTTTACTACAATTTTGTCCTGTGTGAGCTGGCAACAGCATTCATATTTAATTATTTGTCTGCATATGAATTACTTTCAGTCACAGTCCCAAAGAGAAGAGATGCGTGCGGAACTGTGATTCTTTGCCATAATCCAAACCTAAAAGTCTCACCACTACCTTTGACATTTTAAAATGTCAACCCAAGTAAATCAAAAACTGGTTCCATAATAAAACAATAATATAACAAAAGAAGAAGAGAAAAAAAGAAACACAAATCAGAAAGCACTTGAGAACCATCATACTTGGACATAGATACCAAATTCCTCATCTATTATCTCTCTTTTAAATATATAGTTACCAGTTATTTTGTTTGACTGTAATATTTTTTTTTAAATGATGTTAATTAATAATCTTCTAAGAATCAATTGTATGTATTAACTCACTTCTTCTTTGTTACAATAAATATTTACATTAATATGTTTTTTCTTATATAAAGTCCTAAATTAAAGAAAAACACTAACATGATGTTTTTTAAATTTGGAAAGAGATAAGGACTTATTTGTTTGTGAGTAGCTTTTGTTCAATGTCCACTTTCTCTTACTATCTATATATACATGTCTTTTCCTACTTATGGCATCTTATCTTTTTCTCCCTCAAACAAAAGTCAGCGCCTTTTTTTTTTCTTTGTCCTCTCTCAGTACCAGACTTTTTCAGACCTTGTCTTTACTGTTA


Gene Sequence:
>Vu_27951(+)
ATGGAACCAGATTGGGATCTCCACGCCGTAGTCAGAAGCTGCACCACTACTTCCTCCGCCGCCGCCGCCACCACAACCGTATCCACCACCTCATCTGATTTTGGGGCTTCTGTCCCACCTTCTACTTCCGGCAGCTTCTTCTCTGTTTACAACCCTGCTGTACAAGGAGGTCAAGTTGTGTCTCCTTTGGAGAACCCCTATGGAGCAAGGCCTTCCATTGAAGAGCTTCACGAGCTTTGCAAGCCTTTCTTCATCAAACCACAGCTTCACACCTTCCAACCTTCTTCTCCTCTTTCTCCCTTTTCTTATTCATCAGTGTCCAAATCACCTTGTAGCCAGCAAGAACAGAAGCAGCCTCCCCAACCAGGTTCTGCCTCCACCCCAAAACAGAAAAGAAGGTTAATATGCCCTTTTTCTTCCTTTTTATAATTCATGGAATGGGAATTAGATTCTCCAATCCAGAAAGATTTTGAATTTATTTAGCTCTTAAAAACCATGTCTTTGTGGTTCATTCATGACTTTGTCTGAAATGCATGTTTTTTTTTCAACCACAGGAAGAATCAGGTTAAGAAGGTTTGTGATGTGGCAGCTGAGAATCTCTCCTCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGGTCACCATATCCAAGGTTTACCTTAAAAAAATTTCGTCTTTTTTAACAATAAAAGTTTAATGGAGTAGTTAATTCCTAGTCTAAAATAAGAAAAAGTTTTAAACTCAAACAAAACTCACAAATACAATTATATTTTCTTTATCTCATAGATATGAATGGAAACTTGTGTGTACAATTTTTAAGAAGCCAGACTTTGACTTGTTACACTTTACCAAGTCTTTGTTGTTAGATTTTGCCTTTTTTTTTTTAAAAGAAAGCCAAAAGGGGTTAAAGTTATGAACTTAAAAGAACCAACGAGACATTGTTTGTTGTGTGATTTACAGGGGATATTACCGATGTAGCAGCTCAAAAGGATGTTTAGCCAGAAAACAGGTGGAGAGGAACAAATCGGACCCAACAATGTTCATAGTGACATACACTGGTGAACACGACCACCCTGCTCCTACTCATAAAAGCTCCCTTGCTGGCTCCACTCGCTACAAACCTCAGACTGGTGGAGACACAACCACCACAAAACCTGTTTCTCCAGCGACCTCATCAGAGGTGGCACAACACAGTACAAAGTCAGAGTGCATAGAAGAGGAGTTGGAAGATCTGATGAAAGATGATGAAGAAGCAAATGAATTTGACTCAACAGAAACAGTGGTATCAGATGATTTCTTTGAAGGGTTAGAGGAACTGACAGGGTCTGCCATTGACCCCTTTACAGCTACTAGTACCATTGATCGGTGGTCACTGGCCAATAATGCTACCACTGCCGCTGGTGGTAGCTGA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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