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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27927 LG7 42556639 42559699 PREDICTED: proline-rich receptor-like protein kinase PERK7
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, protein autophosphorylation, protein autophosphorylation
Cellular Component   located in   nucleus, nucleus, pollen tube
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
T/A 42557324 missense_variant p.Leu91His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27927.1
MSDLSKIVVKDRKRNVAVKNELYAALFRKLQNPYVRERARFITPTPPPPDNSSPPPPSQDNSPPPPSSSDKKSPPPPSNSSPSPPPPPPPPPPPDKKSGNRESPPPPHSGHHFSPPPPSKNRLSPPKSSSSSSSGDSGNQSLSTPIIIVIAAAAVIFLLLLLMVIFACIKRKKKSQLPIDYCHNQPDDGFHKSEFGYNNNKVEHVMHIPPYPVPVGGWSATQGVSSDMSTASYSGPHGPVLPPPHPTVALGFNQSSFTFEELSAATAGFSQHNLLGQGGFGFVHKGVLPNGKEIAVKSLKSTNGQGDREFQAEVDIISRVHHRHLVSLVGYCISQSNKLLVYEFVPNNTLEYHLHRKGQPVMDWNTRLKIAIGSAKGLAYLHEDCHPRIIHRDVKGANILLENNFEAKVADFGLAKISQDTSTHVSTRVMGTFGYLAPEYASTGKLTDKSDVFSFGIMLLELITGREPVDNTGEFEDSLADWARPLCTKAMEDGSFEGLVDQRLEGNYDERQMSCMVACAAFSVRYSAKKRPKMSQIVRVLEGDVSVEVLGYEGVKPGFGGESGEYKADMMKFRKLALEESGSEQSSAEYGNAGRRVGARMHTP*


CDS Sequence:
>Vu_27927.1
ATGAGCGATTTATCGAAGATTGTCGTTAAAGATAGGAAGAGAAACGTTGCAGTGAAAAATGAATTATACGCTGCATTGTTTCGCAAGTTGCAGAATCCTTACGTGAGGGAGAGGGCCAGATTCATCACCCCCACCCCACCACCGCCGGACAATTCATCTCCTCCCCCACCGTCACAGGACAATTCACCACCTCCTCCCTCGTCAAGCGATAAGAAATCTCCGCCCCCGCCGTCTAATTCATCTCCATCTCCACCTCCGCCACCACCACCACCTCCTCCTCCTGATAAGAAATCAGGTAACCGCGAGTCACCGCCGCCCCCACATTCTGGCCATCATTTTTCTCCTCCTCCACCTTCAAAGAACCGGTTGTCTCCACCCAAGTCATCATCTTCAAGCTCGTCAGGAGACAGTGGAAACCAATCATTGAGCACGCCAATTATAATAGTAATCGCAGCAGCAGCTGTGATTTTTCTCCTTCTCCTCCTCATGGTCATCTTTGCGTGTATAAAAAGAAAAAAGAAATCTCAGTTACCCATTGATTACTGCCATAATCAACCTGATGATGGGTTTCACAAAAGCGAGTTTGGGTACAACAACAATAAGGTTGAGCATGTTATGCATATTCCTCCATATCCAGTTCCAGTTGGAGGTTGGTCAGCAACCCAGGGTGTTAGTTCTGACATGAGCACTGCCAGTTACTCTGGGCCCCATGGTCCCGTTTTGCCACCTCCGCACCCCACGGTGGCTCTCGGATTCAACCAAAGCTCTTTCACTTTCGAGGAGCTCTCGGCTGCCACTGCTGGCTTTAGCCAACACAACCTGCTGGGCCAGGGTGGCTTCGGATTCGTCCACAAAGGTGTTCTACCCAATGGCAAGGAAATTGCAGTGAAGAGCCTCAAATCCACTAATGGCCAAGGAGACAGAGAATTCCAAGCTGAGGTTGACATCATCAGCCGCGTCCACCATCGCCATCTCGTCTCTCTCGTCGGCTATTGCATCTCACAATCCAACAAGCTCCTCGTTTATGAGTTTGTGCCTAACAATACCCTCGAATACCACCTTCATCGAAAGGGTCAACCTGTGATGGATTGGAATACCAGGCTAAAAATTGCGATCGGATCGGCTAAAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATCATTCACCGAGACGTAAAGGGTGCAAACATTCTACTTGAAAACAACTTCGAAGCCAAAGTGGCAGATTTTGGGTTGGCAAAGATTAGTCAAGACACTTCCACTCACGTTTCCACTCGTGTAATGGGAACATTCGGGTATTTGGCTCCAGAATATGCATCAACCGGTAAGCTAACTGACAAATCTGATGTGTTCTCGTTCGGTATTATGCTTTTGGAGCTCATAACAGGTCGGGAACCTGTGGATAACACTGGGGAATTTGAAGATAGTTTGGCCGACTGGGCTAGACCACTCTGTACAAAGGCAATGGAGGATGGAAGTTTTGAAGGGCTTGTGGATCAACGTTTAGAGGGTAATTATGACGAGCGCCAAATGTCATGTATGGTGGCTTGTGCTGCATTTAGCGTAAGGTACTCGGCAAAGAAGCGACCGAAAATGAGTCAGATTGTGAGAGTGCTGGAGGGTGATGTGTCAGTAGAAGTGCTTGGTTACGAGGGAGTGAAACCTGGGTTCGGCGGCGAAAGCGGGGAATATAAAGCTGACATGATGAAGTTCAGGAAACTAGCGTTAGAAGAGAGTGGCAGTGAACAATCATCTGCTGAATATGGCAATGCCGGCAGGAGGGTAGGAGCCCGAATGCACACTCCTTAA


Promoter Sequence:
>Vu_27927::LG7:42554639-42556639(+)
TTAAAGAAGATTTTGAACCAAGACCTAATGTTTCAGCTTATGGTGACAACGACATTGATGCAAAGAAAAAGAAAGAAGTTAAAGAGGATTTTGAACCAAGACCTAATGTTTCAGCTTATGGTGACAATGACATTGATGCAAAGAAGAAGAAAGAAGTTAAAGAAGATTTTGAACCAAGACCTAATGTTTCAGCTTATGGTGACAACGACATTGATGCAAAGAAGAAGAAAGAAGTTAAAGAAGATTTTGAACCAAGACCTAATGTTTCAGCTTATGGTGACAACGACATTGATGCAAAGAAGAAGAAAGAAGTTAAAGAAGATTTTGAACCAAGACCTAATATTTCAGCTTATGGTGACAACGACATTGATCCAAAGAAGAAGAAAGAAGTTAAAGAAGATTTTGAACCAAGACCTAATGTTTCAGCATATGGTGACAATGAAGTTGGTGTAAAGGAAAAGAAGAAAGTTGTGAAAGATTTTGAACCAAGACCTAATGTTTCAGCTTATGGTGATAACAACATGGACGCAAAGAAAAAGAAAGATGTTGAAGGAGATTTTGAACCAAGACCTAATGTGTCAGGTTATGATAATGATAACATCAAAGAGAAGCAAGAGGATAAAATTATACCAAATTTTCAATTTACCTATGACGAATAAACGAAGAAAGCTATAACTACTAATGATATCACGTAATAATAAAGTTTGTGTGCCATGTATCCAATGAATAATATGAAATAGTATATTATGGTTTTTATTTAAAGAATTATGATTATAGTTGATTGCTTATTATGGTTAAGAAAATAAAAAATATAACTTATTTGAAGGTAGATTATTAATACAAAAATCACAACAAAATGGAATTAAATTTTTGTTTTAACTTTTTTGAAAAGTTAAAACCTATTCTCTACCATAATTTTTCAAGGAATCAATAATCAGTTGAAATATTTTCTGAATTAACTTAAATCTTTCTGGCATGTAGCACTTGCATAATTTGGTTATTTGAAGACTCTACGAGTTCTGATAGCTCAGAAAATTCACTGACCTTTCCAAATTTTACAAAATGCATCATCAAGAGATGGTGTTTTCTGCTGATGGTCATTGTATCTGTTGATTTATAAGGAGTTCTGTGGCTGTTTTGTCATTGTTTGTGTTGATTGATTTTGCTGTCTGTCATTTAGTTAGCAATAAGATGATCAACTGTTTAAACATTTTTTGAACTTTTAGCTAGTGATTGCGTTTTGTTGGAAGACCAGGGTTATGATTGTTAATTTCCTACTCAGTTGTATGATGTGTCTGACGCGCAGATTTTTATCTATGTACCAATTGCTTCAGTAATGGAAAATTTGGCTCTGGCATGTCTTCCTTGGAGTTTTTACTCAGGAGACTCTCTTGCTCGATGAAGCATTTTAGAACTTTATGAAGAAAATTGGAATGAAATTTCAGAACACGTTGCAACAAAATCAAAAAGCTCATAGTATATTACACTTTGTTCAAATGCTAATTGAGGATGCCTATGTTGATTGTCGCATAGAAAAAAAAATATTACACACCAATTTTTCTTACACTTCTCTTTTTTTTTTTGTCTTACCTTCTCTAAATTTCACTCTCTAGTACCAGTCAGTTGTTTTGGACAAATGTTTCTTGGAAAAATCTAAATGCCCGTCTAATATATTTTTTCACGCAAAATATAGACATTTTTTAGTAATCGTATCTAATATTTGACATCTATTTTTTATGATCAGAGTCTAAATCAGGATCATATTTATATTTAAATGATTTATTTTGTATAATTAATTTAACATAATATTAGTTCATCACGCTCCATGAAAAAAGAAATGAACTTTGGCCAACACGTAGTCATCGGGCCAGACAGTCGAATTCAACTTCAACACGATCGATTTTGAATCTTCTGTAATGGGTCCGACGCTGCCCTCCAACAAAGCAATAAGATGCACATTTTGAATTGGTTGCGACCAACAGAATCCAGAAAAAGGAATA


Gene Sequence:
>Vu_27927(+)
ATGAGCGATTTATCGAAGATTGTCGTAAGTTTTGGTTTAACTATTAACGCTAAAAGTAGATAAAAAAACTGAAAGCATGCATGGCTGGATTATCTAATTAGGTTAAAGATAGGAAGAGAAACGTTGCAGTGAAAAATGAATTATACGCTGCATTGTAGGTGACATTTTTTGGTTCCATATTACAATATTGCATAATAATTATTCACCATGCTTCTCTCTTTCTGTGGATAACCTCCTGTCCTTTGCTCTCAGGTAGCATTCTCTTTTTCTTACGTACGTACCCCCTCGTGCATGCATGCATGCAAAAAATATCAGCATGCACCTTCGTATATTCCCGCCTTCAAAATCAAAACATGCACAAGGATATATGTTTATACAATTTGTTTACTGTGGCAGGTTTCGCAAGTTGCAGAATCCTTACGTGAGGGAGAGGGCCAGGTTTCTCTCTCTCTTTAACCTTCCCTTCCGTTGGAGAAGAAGTCATCCTTCCAAATGGCTTCTGATTCCAATTCCGATTCCCCACCACCACCAGATTCATCACCCCCACCCCACCACCGCCGGACAATTCATCTCCTCCCCCACCGTCACAGGACAATTCACCACCTCCTCCCTCGTCAAGCGATAAGAAATCTCCGCCCCCGCCGTCTAATTCATCTCCATCTCCACCTCCGCCACCACCACCACCTCCTCCTCCTGATAAGAAATCAGGTAACCGCGAGTCACCGCCGCCCCCACATTCTGGCCATCATTTTTCTCCTCCTCCACCTTCAAAGAACCGGTTGTCTCCACCCAAGTCATCATCTTCAAGCTCGTCAGGAGACAGTGGAAACCAATCATTGAGCACGCCAATTATAATAGTAATCGCAGCAGCAGCTGTGATTTTTCTCCTTCTCCTCCTCATGGTCATCTTTGCGTGTATAAAAAGAAAAAAGAAATCTCAGTTACCCATTGATTACTGCCATAATCAACCTGATGGTATTTTTTTTTTTATATTAAAGACAAATCCATGTGATGAACTTGGATTTGAGCACTCTTTTATTATCACTTCAAAGTTCTTAGAAATTATAGATGATGTCAATATCATTCTTATTTTTTCCATTTAAAATTTGTGAACTGCTGTGTTCTTCGAACAATTATAAGATGGTTGACGAATAATTAATGGGTACATGCAGATGGGTTTCACAAAAGCGAGTTTGGGTACAACAACAATAAGGTTGAGCATGTTATGCATATTCCTCCATATCCAGTTCCAGTTGGAGGTTGGTCAGCAACCCAGGGTGTTAGTTCTGACATGAGCACTGCCAGTTACTCTGGGCCCCATGGTCCCGTTTTGCCACCTCCGCACCCCACGGTGGCTCTCGGATTCAACCAAAGCTCTTTCACTTTCGAGGAGCTCTCGGCTGCCACTGCTGGCTTTAGCCAACACAACCTGCTGGGCCAGGGTGGCTTCGGATTCGTCCACAAAGGTGTTCTACCCAATGGCAAGGAAATTGCAGTGAAGAGCCTCAAATCCACTAATGGCCAAGGAGACAGAGAATTCCAAGCTGAGGTTGACATCATCAGCCGCGTCCACCATCGCCATCTCGTCTCTCTCGTCGGCTATTGCATCTCACAATCCAACAAGCTCCTCGTTTATGAGTTTGTGCCTAACAATACCCTCGAATACCACCTTCATCGTGCGTTCTCTCTTTCTTTCTAAAATTTCTTCAATTTTCCTCTTAGCCCTAACTTCACCAGTTTTATATAATTCAACTACTGGGTTCCATGAATACTTTTCTTTACACCGTTTATTGTATCTATACGATGAAAACCTGTCAACTTTTTTTCAGGAAAGGGTCAACCTGTGATGGATTGGAATACCAGGCTAAAAATTGCGATCGGATCGGCTAAAGGACTTGCTTATTTACATGAGGATTGTAAGTTATCTCTGACTATTCTTTTAATGATTAACGAGGAGGCCAACGTTAACATGACCTCTAACATTAACTAGGTCACCCTCGTATCATTCACCGAGACGTAAAGGGTGCAAACATTCTACTTGAAAACAACTTCGAAGCCAAAGTAAGTTATCTATGTCTAAGCGTTTCTTCTGGGATTACTTAATTAACAATTGGATCTATCCATTCAGGTGGCAGATTTTGGGTTGGCAAAGATTAGTCAAGACACTTCCACTCACGTTTCCACTCGTGTAATGGGAACATTCGGGTAAGAAATTAAACTGTAAATTATGTATGATACGTTTTTTCAAGTTTCAAGCAATGAAAGTGAATTAGTTTGCCAAACATTTCAGGTATTTGGCTCCAGAATATGCATCAACCGGTAAGCTAACTGACAAATCTGATGTGTTCTCGTTCGGTATTATGCTTTTGGAGCTCATAACAGGTCGGGAACCTGTGGATAACACTGGGGAATTTGAAGATAGTTTGGCCGACTGGGTAAGTATATATAGTTTTTAATTAATTCCCACGTACTTTCAATAACTTTAGATTTATAATTAATTTGAACCTTTCAGTTTGGGAGTTTGTGAATGTTTCCCATACTTATAATATAATAATGTCTATTTGTTCCATATCTATCTATGTGCATGAACAGGCTAGACCACTCTGTACAAAGGCAATGGAGGATGGAAGTTTTGAAGGGCTTGTGGATCAACGTTTAGAGGGTAATTATGACGAGCGCCAAATGTCATGTATGGTGGCTTGTGCTGCATTTAGCGTAAGGTACTCGGCAAAGAAGCGACCGAAAATGAGTCAGGTAATACTAATCATGGTTTATTATTTATCATACTGCATTCATTTGACTTTCATGTTCTCTTTTTAACTTAAATTATGATGGATATGAATGAATGAATTAGATTGTGAGAGTGCTGGAGGGTGATGTGTCAGTAGAAGTGCTTGGTTACGAGGGAGTGAAACCTGGGTTCGGCGGCGAAAGCGGGGAATATAAAGCTGACATGATGAAGTTCAGGAAACTAGCGTTAGAAGAGAGTGGCAGTGAACAATCATCTGCTGAATATGGCAATGCCGGCAGGAGGGTAGGAGCCCGAATGCACACTCCTTAA

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