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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27566 LG7 31852400 31854223 Protein ETHYLENE INSENSITIVE 3
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
G/A 31852586 missense_variant p.Pro376Ser
G/T 31853659 intron_variant
G/C 31853694 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27566.1
MMMMFEEMGFCNDLDTMSTVLGDEDITARQTDPEAIVEDDFSDEEIGVDELERRMWKDKMRLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIVKYQADHSIPGRNDGCNSIERKHENIHMSNLGMERMRGTMGVQQPSFSIKGEAVTNLDLLRKRKVSNDFNMMDLKIYTCEQPQCPYSQVQLGFPDRISRDNHRLICAFRGPSDFGGPNFHVNEVKPVIYPQSFVPPKSTAQSANVVPPVIDLTGLEVSEDGQKMISDLMANYETNVQGNKNISSCNRMAAENPCLRQHGITMEGNIFDEPNMSNNHHVFSREEGQYERFKALNNAPFETNHNNHNFNSMFGSFCDLASFDFKEDMQGVGMDDALQKQPDFSIWYQ*


CDS Sequence:
>Vu_27566.1
ATGATGATGATGTTTGAGGAGATGGGGTTTTGTAATGATTTGGACACGATGTCTACTGTCCTTGGGGACGAGGATATCACCGCCCGGCAAACTGATCCAGAGGCGATAGTTGAGGATGATTTCAGTGATGAAGAAATCGGGGTAGATGAGCTTGAAAGGAGGATGTGGAAGGACAAAATGCGTCTCAAGCGATTGAAGGAGCAGAGTAAATCTAAGGAAGGAATTGATGCGGTGAAGCAAAGACAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCCAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGGAAACCAGTGACAGGAGCATCGGATAATCTTCGTGAATGGTGGAAGGATAAAGTCAGATTCGATCGAAATGGTCCAGCTGCCATAGTCAAATACCAAGCTGATCATTCTATACCTGGAAGGAATGATGGATGCAATTCAATTGAGAGGAAACATGAGAATATTCACATGTCCAATCTGGGGATGGAGAGAATGAGGGGAACTATGGGTGTTCAGCAGCCCTCTTTTTCTATCAAGGGAGAGGCAGTTACAAATTTGGATCTTCTTAGGAAGAGGAAGGTCTCTAATGACTTTAACATGATGGATTTGAAGATTTACACATGTGAACAGCCTCAGTGCCCTTACAGTCAAGTTCAGCTTGGTTTCCCTGATAGAATCTCTAGAGACAATCATAGGTTAATTTGTGCATTCAGAGGTCCTTCAGATTTTGGGGGTCCAAACTTTCATGTTAATGAGGTAAAGCCAGTGATATACCCCCAGTCCTTTGTTCCACCCAAGTCTACTGCTCAGTCTGCTAACGTGGTCCCGCCTGTAATTGATCTTACTGGGCTTGAAGTTTCAGAAGATGGTCAGAAAATGATCAGTGACCTTATGGCTAACTATGAAACAAATGTTCAAGGCAACAAAAACATAAGTTCATGTAATCGCATGGCTGCAGAGAATCCCTGCCTTCGACAGCATGGAATCACTATGGAAGGAAACATCTTTGATGAGCCCAACATGTCCAATAATCATCACGTATTTTCTAGAGAAGAAGGCCAATATGAGCGGTTCAAAGCTTTGAATAATGCTCCCTTCGAGACCAATCACAACAACCATAACTTCAATTCAATGTTTGGGTCCTTTTGTGATTTAGCATCATTTGATTTCAAGGAGGACATGCAAGGAGTAGGGATGGATGATGCTCTTCAGAAACAGCCAGACTTTTCCATATGGTATCAGTGA


Promoter Sequence:
>Vu_27566::LG7:31854223-31856223(-)
AAAACTAAACCTACAAGACAGACATAGATATGTACTCATTACACATTCCATAGTTATCCTTTTGCACTCGGGAAAATTGAGTGATTTCAAAACTTTGTTTTGGGTTATTTTATCTCTTATTCACCCTCATATCATAAGAATGAACAGTATTCGATAGAGATCAATCATCCAGAAATCATGTTATCATGGATATGCAAATGAAAACATTTTATTTTTCACACGAGTTTATTTTTGAAATTACTAAGAAAATCAAATATAAAAGATATCACTCGAGGCAAAATGTATTTATTTTACCAAGTGTATTGGTTTACATTTTCACTCAAAGTACCATATAAATAAATTCTCGTGATATTTAACAAGACTTTAATATTCACATACTTTTAAAAAAATGTTTAATTGATGATCATGAGAATTTTTTAAAGATTATAATAAGATCAAAGCAAAAAGTAAAAAGACTTTTAAAAAATGATATAAACAATAAAGATAAAATTAATTATATTCTTATAAATTTTAAGAAAAATTAATTATATCTCTAAGAAAATGAATAATTACTTATCAACAATTTACTATGAATCCATTTAGATTTTATAACAGAGACTTATTCTATGCATCACGACACAATGATAAAAGAAAATTGGACTCACGAATTAGAAACGGATTAATTAATTGAAACTAGCCAAACCATGAAGTCACTAAATAGTCAAAACAATTAGAGACACCAAGAAGCAAAATATTGAAGTAGTAGTAAAAAGAAAAAGAAAAGAGGAATGACAGTATTTGAATATTAGGTAAAATAACCAGAAAGGGATAAACTTAAAATGAGATGTATCTAATGAGAATAATTAAAAAATAATAAGTTAAGTATAAATAATTTTATTCGTCTAATTCCTTGATAATTTCATATTTGGATATATAACTTAAAAAAGAAAACACATTTTGCCATACACGAAAAGAAAAAAAAAAAAGTGGAGAAAAAAATAACCGAACTTTATTACTAACAAACACTCTTCCTCGATGTGGGGTTTAATTACCAATAAAATGCCACCATCTTCCCATTAACCAGATAATGTTCAACTCTCTGTCCCTTTTCCCTCTCTCTTTCTTCCCACCTTCTCTCATGACAGTCTCAATACAAAGAACCTTCTTCTTCTTCTCTTATTGACTCGTGGCCACCACAGAGACTCTGTTCTGGATCCTCTGGTAATAATCTGTGCACCTCTTCTTTCGCTCGCCCTTTTCACTGTTAAACTGCTTCGTGCTATCTGCATGGTCAATCAGATTCATGGGTTTCTGTTGTTTTGATTTCTGGTCTCTGTCGATACTGATTTTGTTACCCTTATGATCTATCATGGAGAAGTTCATGTTCATCTATTTATTTCATCTATTTATTTCATCCTCCATGTTGGAAGTTTTCTCCCTTTCTTAGCTTGCTGGTTTTGTGGGGGGTTTTTTGGCGTGATTGTTCTCCTCATCAATTTTACTAACTTTTATGTTTTATCTGAAAGCTGCAGCCTTTTATGATGCTTTAATGAAAAAACCTTTCGAAGTCGTCATTTGTTGTCCTTGTTTTTATAGTCACCTCATTTGTTGTCTTTGCCCATGTTGTTTTTGCTTCCCTGTTTGATTCGTTAATGATTGGATCTGTCGAAATGGTACAGCCCTGATCTATTAATATTCATCAACGTTTTGAATTTTGAGGTGATATGTTTTTTTTCTTTTTAATTCATGTTTTAGCCTAGATTAATGTTGATTTTAGCTTCGAGATATATGTGCATATTTTACGATGTGATTCTCTTCATCTGGAGAGTATTTGATTTCTGTGCCTTTTTGAATTTTCTTTGATCTTTGTTTTGTTACTGTTGGCAGGTGCAAAGGCCTTTAAGAGCTAAGAATTTGTTAACTTGAATTGGTGTACAGTGCTAAGGGGTTAGTTTGAAATCCAACTTCCTACTTCCATCATCAGAAGCTCACAGGTTCGATCTTTATTTTTTCCTCGGAAA


Gene Sequence:
>Vu_27566(-)
ATGATGATGATGTTTGAGGAGATGGGGTTTTGTAATGATTTGGACACGATGTCTACTGTCCTTGGGGACGAGGATATCACCGCCCGGCAAACTGATCCAGAGGCGATAGTTGAGGATGATTTCAGTGATGAAGAAATCGGGGTAGATGAGCTTGAAAGGAGGATGTGGAAGGACAAAATGCGTCTCAAGCGATTGAAGGAGCAGAGTAAATCTAAGGAAGGAATTGATGCGGTGAAGCAAAGACAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCCAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGGAAACCAGTGACAGGAGCATCGGATAATCTTCGTGAATGGTGGAAGGATAAAGTCAGATTCGATCGAAATGGTCCAGCTGCCATAGTCAAATACCAAGCTGATCATTCTATACCTGGAAGGAATGATGGATGCAATTCAATTGGTCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCTCCCCAGAGGAGGTTTCCATTGGAGAAGGGTATTCCTCCACCATGGTGGCCTACAGGAAATGAAGAGTGGTGGCCCCAGATTGGTTTGCCTAAAGATCACAGTCCCCCTCCTTACAAGAAGCCCCATGACCTAAAGAAGGCATGGAAAGTTGGCGTTTTGACGGCAGTTATCAAGCATATGTCCCCAGATATTGCCAAAATTCGGAAGCTTGTGAGGCAGTCCAAGTGCCTCCAAGATAAGATGACAGCGAAGGAAAGTGCAACCTGGCTTGCAATCATCAATCAGGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGACTATGTCCCTCCATTAGCCTCAGGTGGAGGGAGTGGATCTTTGGTGGTCAATGATGGCAATGAATATGATGTTGAAGGGGGTGAGGATGAGCCTAACTTTGATGTGGAAGAGAGGAAACATGAGAATATTCACATGTCCAATCTGGGGATGGAGAGAATGAGGGGAACTATGGGTGTTCAGCAGCCCTCTTTTTCTATCAAGGGAGAGGCAGTTACAAATTTGGATCTTCTTAGGAAGAGGAAGGTCTCTAATGACTTTAACATGATGGATTTGAAGATTTACACATGTGAACAGCCTCAGTGCCCTTACAGTCAAGTTCAGCTTGGTTTCCCTGATAGAATCTCTAGAGACAATCATAGGTTAATTTGTGCATTCAGAGGTCCTTCAGATTTTGGGGGTCCAAACTTTCATGTTAATGAGGTAAAGCCAGTGATATACCCCCAGTCCTTTGTTCCACCCAAGTCTACTGCTCAGTCTGCTAACGTGGTCCCGCCTGTAATTGATCTTACTGGGCTTGAAGTTTCAGAAGATGGTCAGAAAATGATCAGTGACCTTATGGCTAACTATGAAACAAATGTTCAAGGCAACAAAAACATAAGTTCATGTAATCGCATGGCTGCAGAGAATCCCTGCCTTCGACAGCATGGAATCACTATGGAAGGAAACATCTTTGATGAGCCCAACATGTCCAATAATCATCACGTATTTTCTAGAGAAGAAGGCCAATATGAGCGGTTCAAAGCTTTGAATAATGCTCCCTTCGAGACCAATCACAACAACCATAACTTCAATTCAATGTTTGGGTCCTTTTGTGATTTAGCATCATTTGATTTCAAGGAGGACATGCAAGGAGTAGGGATGGATGATGCTCTTCAGAAACAGCCAGACTTTTCCATATGGTATCAGTGA

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