Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_27428	LG7	28198544	28199905	PREDICTED: scarecrow-like protein 32	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
C/A	28198567	missense_variant	p.Ala447Ser
A/T	28198568	missense_variant	p.Phe446Leu

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_27428.1

MNKNQIPRTRPWPAGFPTSKALTNFADANCMEQLLLHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAQTGTCKMLVAVADHARTNISIDTHKFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVPPLIKLTVADATFRDIPPMLDLSYDELGAKLVNFARSRNVVMEFRVVSSTYQDGFADLIEQLRVQQQHFVYAVEPRPCEALVINCHMMLHYIPDETLHAMPETDLTSLLYDSSSAAGSSSAISVTSTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAQEGVQRVERVEPKNRWEQRMKNANFQGVAFSEDSVGEVKGMLDEHAAGWGLKREDEHIVLTWKGHNVVFASAWLPV*

CDS Sequence:
>Vu_27428.1

ATGAACAAAAACCAAATCCCTAGGACTAGGCCCTGGCCTGCAGGCTTTCCTACCTCCAAGGCTTTAACCAACTTCGCCGACGCTAACTGCATGGAACAGTTACTTCTTCACTGTGCCAACGCTATTCAAACCAACGACGTAACCCTCGCACAGCAAATCCTTTGGGTCCTCAACAACATAGCATCCCCCGACGGCGACTCCAATCAACGCCTTGCCTCCAGCTTCCTCCGTGCCCTCACTGCACGTGCCGCCCAAACCGGCACCTGCAAGATGCTCGTCGCCGTAGCCGATCACGCCCGCACCAACATCTCCATAGACACCCACAAGTTCTCCGTCATCGAGCTCGCCAACTTCGTCGACCTAACTCCCTGGCACCGCTTCGGGTTCACCGCTGCCAACGCCGCCATCCTAGAAGCCACTGAGGGTTTCTCCGTCATCCACATCGTCGATCTCAGCCTCACGCATTGCATGCAGATTCCGACGCTCATCGACGCCATCGCTAGCCGCCACGAGGTCCCTCCTCTCATCAAACTCACTGTCGCCGATGCCACCTTCAGAGACATCCCTCCTATGCTCGACCTCTCTTACGACGAACTCGGCGCCAAGTTGGTCAATTTCGCAAGGTCCAGGAACGTCGTCATGGAGTTCAGAGTGGTTTCTTCCACTTACCAAGATGGCTTTGCGGATTTGATAGAACAGTTAAGAGTGCAACAACAGCATTTTGTTTATGCAGTAGAACCTCGTCCCTGTGAGGCTTTGGTTATCAACTGTCACATGATGCTTCACTACATCCCCGACGAAACCCTACACGCGATGCCTGAAACTGACTTAACCTCTTTGCTCTACGATTCTTCTTCGGCTGCTGGTTCTTCTTCTGCCATTAGTGTTACTTCCACTTCCTCGCTGCGATCGTTGTTCCTTAAGTCCCTGCGGGGTTTAGATCCAACGGTTGTAATATTGGTGGATGAAGATGCAGATTTGACATCGAATAACTTGGTTTGCAGGCTAAGATCTGCGTTTAACTATCTGTGGATACCATACGACACTGTGGACACGTTCCTTCCACGAGGGAGCAAGCAAAGGCAGTGGTACGAAGCAGACATTTGCTGGAAGATTGAGAACGTGATAGCGCAGGAAGGGGTTCAGAGGGTGGAGAGGGTTGAGCCTAAGAACAGGTGGGAGCAGCGAATGAAGAACGCGAACTTCCAAGGAGTGGCTTTTAGTGAGGACTCTGTTGGGGAGGTGAAGGGCATGCTTGATGAGCATGCTGCGGGATGGGGATTGAAGAGGGAAGATGAACACATTGTCCTCACTTGGAAAGGACACAACGTGGTCTTTGCCTCTGCTTGGTTACCTGTTTGA

Promoter Sequence:
>Vu_27428::LG7:28199905-28201905(-)

AGTCGGATTTAAATCATAATAGGATTCTATAATTACAAAAGTTAATTCACTGATATTAATTTTTAAAGACCAACTTTTAGGGTGGGTTAAGTCTATTATAATTCATTACTAACTTTAAAGTTAAAACAATTTATTTAGCCTCATCTGTTTTTATTTTAAAATTTATTTAATTTAGTTTATAACACTGATAAAATCTATTTTTAATATTATTTAGTTTCATCAAGAGTAACTTCAAAAAAATCTCAAATAGATTTCAAACATTGTCCAATTTTCTTTACAAGAAAACTTTTACCATGATTAAAATTTGATAGCTTAGTGAAATTCGTATTCATCATGTATTGTTGTTTTCTTTCTGGGTCTCCAATAGGAATGAACCAATATATGCCTGTTGGAAATAGTTTAGTATGGTAATAAATGTGTAATCAACAAGTCATCTATCACCTTATCTTAAATCTTTATTTATATTTTTTGAAAAAAAATTATTATTGTCAATCTAATTATGACCTAAATATACTATACTAGTGTGAGGAATTTCGGCTGTTTTGTTGTTTAAAAAGTTGACCATCTTACAAGATATACATTACAATTATAAATACAACCTTTTCCAAGCTTGTCTTTTACATTAAGTTGACCACCACATTTTTTTACCAATTACATCCACCTTTATATGTTTGCACAAAACTGATCAGGAAAAAAAAGTAAAGTAAAAAATATGAATTTGTAGAAATTCCAATTTGAGAAAAGTATTCGTGAATCTCATGTAAAAAAATCAATTTTGTTTGAAGAATAAAAAATCAAGTGATAAAGATTCTTTAAATGAAAAGTTTTTTTAAATAAATAAATTGTTACTATAGAAATATAAAACTCACACTAAAAATATTGTAATTATCCTTAAAAAATGATTGAACTTTATTATCTAAATAGATTAAAATGGTTCCAACAAACAAATTTTTAAGATATTATTAGGAAAGAGGACTAAAGTTGTAACAAATTTGTGTGTAGATGAAATTTGAAAATGAAAATGTGGAAGATTAAGATTAAGTACGAAGAAAAGAGCATGCGAAGGTGAGGCGCAGACGGAGGGAATAGTTGTAGTTGTCGGATGTTAAGTATCTGAATTAATGAGGGGATCCAAGGTAGGTGGGCATGCATGGTGATGGTGTGTTATTTTGGCAAGATTTACAGAGAATGGCAGTGAGAAAATATAGCACATTCTGATGGTGATGAAAAAATGATTTGTTCAATTATGTGATGACCCGTGAGAGAGTGAGCCAAAAGCTTAACTGCCTCAAATCCCTCTCACAGTGCCCACCATTATACGACAAAACCCCAACTCCCATGTACAAACAATTTGCTGGCCGGCTGCTTCACATGCCTCCAAAATCTAACACGAGCAGTGCTCCTACAGCTACAGGTACTATCCTCTCTCCACTGCCTCCCTCTTATATTTCATCTCTCTTTCTAAAGAAACCAAACCAAAATGGGGAAAAGATAAAAAAAGTTAATTATCTCTGGAGAGTGGAGTGGGATTAGCACCTTTTGTAGCCATGAAAGTGATGTTCTCAGCACTACTCCTTTTGCCATCTGAAAAAGCCTGAACTTCCCCTAGAAGGGTCTCTTTTGCCCAATTTGACTTCAAATATGTTTTCTCGGGGCGAGAGTTTCCCCTCTACCGATCAGTCTCTGTTGGGAGGAACCATAATATAATCCCCCACGAAAAAGCTGAACTGTCTATTTTCTGTGCAGAATTCTCCCAAACTCTACTGCCAATTTTCACCCACAACTTGGATCGCTTCCCGATGGCAAAGGCACCCACTACTAGTCAGGTCACTTTCCCTTTTCCCCTCTTCTCTCCTTAATTCTCCTTTCCCCTCTGCCCCCAACTTTCTTCTTCACCCTTTTAAGTCATTCATTCACTCACTCATTCATTCATTCCACCCACACTGTCCATGACGCAATTCACACCCTTCCACCAAATCACACCCCTCCCCAACCCTACC

Gene Sequence:

>Vu_27428(-)