Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27372 LG7 27367258 27368247 PREDICTED: protein FAR1-RELATED SEQUENCE 12-like isoform X1
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/G 27367271 downstream_gene_variant
G/A 27367368 downstream_gene_variant
A/G 27367483 downstream_gene_variant
T/C 27367493 downstream_gene_variant
A/G 27367498 downstream_gene_variant
G/T 27367503 downstream_gene_variant
G/A 27367524 downstream_gene_variant
C/G 27367548 downstream_gene_variant
A/G 27367551 downstream_gene_variant
G/A 27367560 downstream_gene_variant
G/A 27367635 downstream_gene_variant
C/G 27367654 downstream_gene_variant
G/A 27367690 downstream_gene_variant
C/T 27367739 downstream_gene_variant
C/G 27367740 downstream_gene_variant
A/G 27367752 downstream_gene_variant
T/C 27368103 stop_lost p.Ter105Argext*?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27372.1
MVDLEAVAETVENSTDQISAAFEGSSIGEPDVGMEFESEEAAKNFYEKYAKHEGFVVRLDRCHRSEVDNRIISRRFSCNKQGFHVRVRNKTKPVHKPRTSIREGCEAMMLVKVNKCGKWVVTKFVKEHSHLLNASGSPSYSKMIVSFIFFNS*


CDS Sequence:
>Vu_27372.1
ATGGTGGATTTGGAAGCTGTGGCAGAAACAGTTGAAAATTCTACTGATCAAATATCAGCAGCATTTGAAGGCAGTTCTATTGGGGAGCCAGATGTTGGTATGGAATTTGAGTCAGAGGAAGCTGCTAAGAACTTTTATGAGAAATATGCAAAACATGAAGGGTTTGTTGTTCGCCTTGATCGCTGCCACCGTTCTGAGGTTGACAACCGAATCATTTCACGCCGTTTTTCATGCAATAAGCAAGGTTTTCATGTGAGGGTTAGAAATAAAACCAAGCCTGTTCATAAACCAAGGACTAGCATAAGAGAAGGTTGTGAAGCCATGATGTTGGTTAAAGTTAATAAATGTGGGAAGTGGGTGGTTACTAAATTTGTGAAGGAGCACAGTCATCTACTAAATGCTTCTGGTTCTCCTTCATATAGTAAAATGATTGTGAGTTTTATCTTCTTCAATTCCTGA


Promoter Sequence:
>Vu_27372::LG7:27365258-27367258(+)
CAACCCATCAGCCAAGATATTTTGTCCATTATGGTTGTCCATACCAGAACCTACAAATCAACTAGTCTGTCCATCCTATCCATCCCGACCATCTAGTCAGTCTGATCCATCCTCTCCAACTCTTCCATCCTGGTCATCTCTATTAACCCATACATCACGCCAGCCCATACATCCTGGTTACCCTGTCATCCCGTCTATCAGACTATCGCAGCCATTCCATCCAAACGATAACTATAAACTCATACTATGAAAAGTAAAACTTCCATCCTGGTCATCTCTATCAACCCAGACATCACGTCAGCCCATCCATCCTGGTTATCCCGTCAGCATGTCTTTCAGACTATCGCAGCCATTCCATCCAAACGATAACTATAAACTCATACTATGAAAAGTAAAATTGAAACTAAGAAGGACAACACAATAGCCCAAAACAACTTCTTTTAGAACAATGAAATGACAAAAAAAAATGTAGTTGAAGAAGACTTAACCTTTAAATTAATACTCGCCTAAAAAAGTATGAAAACAAACTTTGAAGAAGATGAAGAAGAAGAAGCTAGGATCGAATAAGAATATGAAGAAGCATGAAAGAGAAAAACAGAGTGAAAAATTTATCTAAAAAGAGTAGGAAATTTAAGTGCAAATGACAAATGACTAAAAATCCAAAATGCTAGACAAGTGTCATCATACCAAATTGAGTATATTTAGTAACTTTCTATGGTTTTATTGTTTTAAATATATATTGACACCAATTATTGACCGTAAACAACATGTAATCACATTTGACCACCAATTTAATTAAGAATGTGAACAACATATAATGAAATCTAACTAAGCAAAACATAATTAAAGCGTTCATAATAAGAAATTTACAAATGATTTAATATTTAATCCAATACACATTGTACTTATTACTTAAACATATTTATCATTATTTTAACCAATATATTTTATCATTTTTATTAAAAGCTTATTGAATAAAAGTCATTAATTATTTTACTTTAACCAAAGTATCATTTGACCTCACATTTATTAATACATGAAGAAAAAATGACAAATATCTACTTCTAAAATTATAATTTTTTTAAGAATTATATATAAAAGAAAAGAATTAGAAATTTAATTAAGAATACTTAAATTTACCATAAACTTGAAAAATTAAATATAAAATAAAAACTGAAACATACTTTAATATTTAAGTTTTTTTTATCAAATTTTAATATTAGACTTTTTATTTTTCTCGTAGTTTTTGTCAAAAGTAATAGATTCAGTAAAGATATTTTGACATCAGGAATTATTAAAAAATAATTTTGTAATTATACTAAAGTCAAAGGATAATACCTACGCAGTTACTAGGTCGTAGTAACTTTTTAAGAGATATAAAAGTATTTCTCTTTTTTATTTTCTTTTCTAGTCTACAAGATATTTTATTTTATTTATTTATAGACTGGTTCTGTTTTGGTTTTGCACATTGCTTTTGGTTCACTTAATACATTACCACTTAATAAAAAATATTTAATAAAAATCAATAAATTTAATTTTAAATATATTATGAATAAAAATTAAAAATATTTCGAGAATCACTTAAATTTTTAAAGACAAAAAACTTAAAAACATCAGAAATATCCAGAAATGACCAACATTAAGCCAAAAAAAAATGATTTTATTACAAATGAAAAAAACATAAAAGTCATGACATTCTTCTTCCTTCATTGAACACATTTACTTTCATTGTTCAACTTTCTCGCATTATCTTCCACCAATTTAACCCTACTTGCACACATCCCTGTGTTAATTCCTACCAAGTAAGCTTACTCATTCTGGGTTGATTCATTTCACTTCATTGCCTTTAAAATTTCACATTTTCACTGATGGGTATGATTTCAGGAAAATTCTTGTATGTGGGGAGTTTCAACCTACACACACCCACACCCTCTTTTTTTATGTATTCGCTAGAGCTTATGTACGGTTGAATCTGCCAGGGAAAACTTTGTTATAGCAAA


Gene Sequence:
>Vu_27372(+)
ATGGGTTTGTTAATTTTGTAAGATAAATTCAGAGAATGGCAATTTGTTACTGTTTGTTGAGATTTTGAAATATTGGGATTCAATACCATTCTTCCATTTCTTTTGTCGAAGGTAAGCTCAATTTGGTTTGGGGCTGCATATTTTCGTAATGCACTTGTCTTCAGTTTTGGTTATTCTCAAGTGTAACTACAAATTAAACAAACTGTTAAAATTGGATGGAAAACCATTTGAAGCATCATTAAGGAGAGTAAAGATAGTCAGGGAGGGAGATGAAGAAGAACATTGAGAAACTTATTTAGAGGGATTTATGATGAATAGTATACTAAAAATCTGGTCTTAAACCGAAATTAATGCAACTTTGCCAAAACCTACTTACTGGAATAAGGCTTTGATTGTCGTGGTGGTTGAAATTTGAAGATAGAATTTTGCTTCGGTGAATTTTCTTTTGAAAATGTATTTATGCAAGATTTAAATAGATAAGCCCATGATTGGATAGTTTCATTGAATGGTCATTTTCTTACTATTGTCTTATTAGTGGATTTGGAAGCTGTGGCAGAAACAGTTGAAAATTCTACTGATCAAATATCAGCAGCATTTGAAGGCAGTTCTATTGGGGAGCCAGATGTTGGTATGGAATTTGAGTCAGAGGAAGCTGCTAAGAACTTTTATGAGAAATATGCAAAACATGAAGGGTTTGTTGTTCGCCTTGATCGCTGCCACCGTTCTGAGGTTGACAACCGAATCATTTCACGCCGTTTTTCATGCAATAAGCAAGGTTTTCATGTGAGGGTTAGAAATAAAACCAAGCCTGTTCATAAACCAAGGACTAGCATAAGAGAAGGTTGTGAAGCCATGATGTTGGTTAAAGTTAATAAATGTGGGAAGTGGGTGGTTACTAAATTTGTGAAGGAGCACAGTCATCTACTAAATGCTTCTGGTTCTCCTTCATATAGTAAAATGATTGTGAGTTTTATCTTCTTCAATTCCTGA