Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27354 LG7 27124261 27124973 leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 27124272 synonymous_variant p.Pro4Pro
T/C 27124283 missense_variant p.Val8Ala
G/A 27124325 missense_variant p.Gly22Asp
G/A 27124344 synonymous_variant p.Gln28Gln
T/C 27124365 synonymous_variant p.Thr35Thr
C/A 27124369 missense_variant p.Gln37Lys
G/A 27124371 synonymous_variant p.Gln37Gln
T/C 27124379 missense_variant p.Met40Thr
T/C 27124399 missense_variant p.Cys47Arg
G/A 27124403 missense_variant p.Gly48Glu
G/A 27124466 missense_variant p.Arg69Gln
T/C 27124490 missense_variant p.Leu77Pro
T/C 27124504 synonymous_variant p.Leu82Leu
T/C 27124516 missense_variant&splice_region_variant p.Cys86Arg
A/G 27124536 downstream_gene_variant
C/T 27124537 downstream_gene_variant
G/A 27124601 synonymous_variant p.Ala89Ala
C/T 27124621 missense_variant p.Pro96Leu
C/A 27124646 synonymous_variant p.Leu104Leu
G/A 27124652 synonymous_variant p.Ser106Ser
C/T 27124659 synonymous_variant p.Leu109Leu
G/A 27124661 synonymous_variant p.Leu109Leu
A/C 27124663 missense_variant p.Tyr110Ser
C/G 27124664 stop_gained p.Tyr110*
G/A 27124671 missense_variant p.Val113Ile
A/G 27124681 missense_variant p.Asp116Gly
T/C 27124690 missense_variant p.Leu119Pro
C/T 27124702 missense_variant p.Ala123Val
G/A 27124703 synonymous_variant p.Ala123Ala
C/T 27124725 synonymous_variant p.Leu131Leu
A/G 27124727 synonymous_variant p.Leu131Leu
C/T 27124748 synonymous_variant p.Val138Val
C/G 27124770 missense_variant p.Leu146Val
T/C 27124776 missense_variant p.Cys148Arg
A/G 27124790 synonymous_variant p.Leu152Leu
A/G 27124823 downstream_gene_variant
C/G 27124835 downstream_gene_variant
A/G 27124879 synonymous_variant p.Arg161Arg
A/G 27124907 missense_variant p.Arg171Gly
G/A 27124952 missense_variant p.Asp186Asn
C/G 27124961 missense_variant p.Pro189Ala
T/G 27124971 missense_variant&splice_region_variant p.Leu192Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27354.1
MTGPLPLVIATMPILRNLHLGGNFFSGQIPPEYGTWQHLMSSWETSCGAWKPHRASRALHWLLQRLLRRHPVGEWKLVPTCLFRRCVNALSGSLTPELGNLKSLKSMDLYNNVLSDEVLTSFAELKNLTLLNLNRVGVSRQLQLLLLCVVKLKYIWLGVEEEKVGGKEEGEDVTRCDKEKWDGWDVTHFLAH*


CDS Sequence:
>Vu_27354.1
ATGACTGGTCCTCTCCCCCTCGTCATCGCCACCATGCCCATCCTCCGTAATCTCCATCTCGGCGGCAACTTTTTCTCCGGCCAGATCCCTCCCGAGTATGGCACTTGGCAGCACCTAATGAGCTCATGGGAAACATCCTGCGGAGCTTGGAAACCTCACCGCGCTTCGCGAGCTCTACATTGGCTACTACAACGCTTACTCCGGCGGCATCCCGTCGGAGAATGGAAACTTGTCCCAACTTGTTTGTTTCGACGCTGCGTGAATGCGCTCTCCGGCTCGCTCACTCCTGAGCTGGGGAACCTGAAGAGTCTCAAGTCGATGGATCTGTACAACAACGTTCTCTCCGACGAGGTTCTGACGAGCTTTGCGGAGCTCAAGAATCTAACTCTGCTAAACCTTAACCGTGTAGGAGTCAGCCGTCAGCTCCAACTCCTCCTTCTTTGTGTTGTGAAACTAAAGTATATTTGGTTAGGAGTGGAAGAAGAAAAAGTTGGAGGGAAGGAAGAAGGTGAAGATGTGACACGATGTGACAAGGAAAAATGGGATGGATGGGATGTGACGCATTTCCTTGCACACTGA


Promoter Sequence:
>Vu_27354::LG7:27122261-27124261(+)
CGAGTCTTGATGTGGATCATTTCATCGGATATCTGAGGTGCACTATCACACGCCTTCATGAGTTTGTGGAGGAGTCTCAGATGTTTGAGTTCTATGTATGGTGGACTCAGCCCACCCCGCCATATTATCGTCGCAGAGGACGATGTTCTTCGTCTGATGGATCAGACGGGGACTCTGAGGATTCCGAACGCACTTTGACTGCCCCTATATACCCGATTCCTTTGGAGGAGAATCTCGAGAGTCTTGAAGAGCTTCACCAGAGGGAGGAGGAAGAGTCAAAAGAGCACAAGGATGAAGAGAATGATTATCTTTGTGAGATTTCTTCCCAAGGATCCTGTTGTTAGGGTTTTTCTAACCATTCAACCATGGTTAGGGTTTTTGGTGTAGCTTCTCTATAGCCTTTGTAATTACTGATGAATCATTAAATGCTTTTGGAAAAGGTTTAAATTCTTTTTCCCATTTTATTATTCTTTATAAGAGAAGAGAAGAAGGATAAGGTGAATTCATTAAATGCTTTTGGAAAAATTTTGAATTTTCTAGTGGTTGTGTAAACAATAAATGTCTGTGGTAAAGTTAGGTATGCATGGAGTGTGATGTATATGAAAATTCGAAACTATAACTTGAACTTTACACTCCCATATCAAGTACTAATTATGTGGGGATAATTGAATTATTTTATTATACCAAACATAATTTTTTACAATGATTAATGATTGAGATTGGATTTTCTTTAGAAAAATGTAGCTTCTGTTTTTTAACATTTAACGTGAGCGTCAGTAATGAAAGTAGCACAGACAAATCTTGATTTATAATTAAAACTCATACATTTGATTGATATTAATTGTGTATTCTACAAAGTTCAAATGGTAAGGTTCAATTTGTCTTTTTTTTGTTTATAAGATTGCCTAGATATATTAGGTGGAGAAACAATGGGAAAATATTCGCTAATGATTCATTTAATATATCAATGAGAAATATTAATAATAATCAAGATTTCAACTTCATTGTTGGGTTTAAGTGGAACTCTTCCATAGAAAGTTTGTAACTTAAATTCACTAATGATAATTTATTATTGTAAACCTCTAAATTTGATAGGATTTTATAAACAATAATAAGTGCAAGAAATAATTTTGACATCCGTTAAGTGGAATATTATATCTCAGTTAACAATCGAGACATATCTAAATGTAGTAAAAAAAAAGTGAATTTTTACCTCGATTATAAACTAAAACATACACTTTAATATTAGGTCTTGATTTAATAAGAACTTAAACATAACACCATTAATAAATAATAAAAAAAAGTAATAATGTTACGTTTATTTTAATAACTAAAACCTAAACCTTTTTCATATAAAACTTGTTTCATTTTAAAAGGCATATATTAAACTTCACTTATCTAGATAAATTAAAACTTAATATCTTTAAAATAAAATAATTTATTTAAATCAGAAAATATTAGGCTTCGTGTTTTATCACACTTGAAGCCTAATACCCTTTAAATTAAATAATTTTAAATTAATTAAATTTTGGCTTTTCTCATACCTAAAACCTAATTACTAGTGCCATCAGGAGAAATGACAGCGGTTATTTTCACTGATAGACACCGGTTTCTTAACCGAGACATATTCAGACAATGTAAAAAGTGATAGACCTTATGTCTCGGTTCATAACCGAAGCATAAAATGGTAAGATTATGCCTCGATTCAAAATTAACTAAAGCAGTAACATTTTTTATTTTTTTAAATATTTTTTTTCACTGTACTTTATGCCTCGGTTCCTGATGAACCGAGGTCGTTTCTCCCCCTCTCTTGTACCTCCATTTCCTCTCCTACATCTCCCATGCCGATAATCAGTTCTCCAACCCAATCCCATCCTCCTTCTCCGCACTCTCCGTCCTCCGCCATCTCAACCTCTCCAACAACGCGTTCAACGCCACCTTCCCCTCCAACCTCACCCGCCTCGCCAATCTCCAAGTCCTTGACCTCTACAACAACAACA


Gene Sequence:
>Vu_27354(+)
ATGACTGGTCCTCTCCCCCTCGTCATCGCCACCATGCCCATCCTCCGTAATCTCCATCTCGGCGGCAACTTTTTCTCCGGCCAGATCCCTCCCGAGTATGGCACTTGGCAGCACCTAATGAGCTCATGGGAAACATCCTGCGGAGCTTGGAAACCTCACCGCGCTTCGCGAGCTCTACATTGGCTACTACAACGCTTACTCCGGCGGCATCCCGTCGGAGAATGGAAACTTGTCCCAACTTGTTTGTTTCGACGCTGCGTATTGCGGACTCTCCGACGATATTTCGGCTGACCTCGGAAGGCTTTCAGAATATGGACACGCTCTTTCTTTAGGTGAATGCGCTCTCCGGCTCGCTCACTCCTGAGCTGGGGAACCTGAAGAGTCTCAAGTCGATGGATCTGTACAACAACGTTCTCTCCGACGAGGTTCTGACGAGCTTTGCGGAGCTCAAGAATCTAACTCTGCTAAACCTTAACCGTGTAGGAGTCAGCCGTCAGCTCCAACTCCTCCTTCTTTGTGTTGTGAAACTAAAGTATATTTGTAAGATTATTATTAATGAGTCAAGCACGTGCTTCGTGAAGTAGCCTTGCTATTTTTTAGGGTTAGGAGTGGAAGAAGAAAAAGTTGGAGGGAAGGAAGAAGGTGAAGATGTGACACGATGTGACAAGGAAAAATGGGATGGATGGGATGTGACGCATTTCCTTGCACACTGA