Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_27350	LG7	27076484	27077326	PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
G/T	27076520	missense_variant	p.Val13Phe
C/T	27077157	missense_variant	p.Ala225Val
A/T	27077162	missense_variant	p.Ile227Phe
C/G	27077217	missense_variant	p.Ala245Gly

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_27350.1

MVLHSRIFSYHVVSFLLLISCGMNYGTDTDIFCLQSIKDALEDPNNYLKFSWDFNNKTEGFICRFIGVECWHPDENRVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGTIPGDISTLVPFVTSFDLSSNEFSGAIPVTLSNCTFLNSLRLDQNRLTGQIPLQFGILPRLKTFSVSNNLLTGQVPSFNSSVSVNYANNQGLCGGNGLGSCQAKNSKSNMAVIAGAAAGGVTLAALGLAVAMFFFVRRVSVKKKEEDPEGNKWARSLKGTKQIKAS*

CDS Sequence:
>Vu_27350.1

ATGGTGCTGCATAGCCGGATTTTCAGTTACCATGTTGTTAGTTTCTTGTTGCTGATTAGTTGTGGCATGAACTATGGAACCGATACTGATATTTTCTGCCTACAAAGTATAAAAGATGCCCTTGAGGATCCCAATAACTATTTGAAGTTTTCTTGGGATTTCAACAACAAAACTGAAGGGTTCATATGTAGGTTTATTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAAACTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAATTGCTCTAGCTTAACTGGGTTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGATATATCTACTCTTGTACCATTTGTGACCTCTTTTGACCTTTCTTCAAATGAATTTTCTGGGGCGATTCCGGTGACTCTTTCAAATTGCACCTTTCTCAATAGCCTTAGACTTGATCAGAACAGACTCACTGGTCAAATTCCTCTACAATTTGGTATTCTCCCACGGCTCAAGACCTTTTCTGTGTCTAACAATCTTTTGACGGGGCAAGTTCCAAGCTTTAACTCTTCAGTTTCAGTGAATTATGCAAATAATCAAGGCCTGTGTGGAGGTAATGGATTGGGGTCTTGCCAAGCCAAGAATTCTAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCAGGTGGGGTGACTCTTGCAGCATTAGGATTGGCTGTTGCAATGTTTTTCTTCGTGCGACGTGTTTCTGTCAAGAAGAAGGAAGAGGACCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACAAATTAAGGCAAGCTAA

Promoter Sequence:
>Vu_27350::LG7:27074484-27076484(+)

TAATTAAACACGATCAAATAATTAATAATCTCGTAGGATATTTGTATACAATATCCTCTATGAATAGCAACTAATGAAATTTCGTGTATAGCTGTTGCCATCAATGTTCAAACAAAAAATTGCAACAATATTACACTACTTTATTGTATAAAATTTTTGCCATCTTCTTCATTGATCTTAAACGCCATAAAATATCATGGAAAATGTTTGATAGATACTTTTGACATATTAACACCTGAAAAGCATAAAAGAGAAAAATAATAAATATATCAACCAATAAATTTACGACACATTCAATCATCTATACAAAAATTTATGACACACTTTTTTACTTTTTATTATTGCCACATGCAAAACTGTATGTAGAAAAAGTGCGAAAAATAGTATTAGATTAATTGCATTTTATAAAGTATCTTTTTAATCAGCAGAATTCTTGGCATACTGTTTTAAGAATTAAAAATATAATTTTTATCAGAGATTATATTAAAACAAATTTAGAAACATAAACAAACATGTTCCTTCCTGCATCTTAATAAAGACATGATTTTTCAGTTGGAAATTTACCATTTTAGAACTGAAATATTAAAGAATGAAAAAATATCTGTTCTTTCTTTCCTGAGGTGTCTGAATTTTTTTCTTTCTTTTGTCCAATAATAGCAAGACCCTTAATTTTCCACAATGGGGAGTTACAGCAAGTGAGGGAAGCACTTTTCACAAGTCTTCCCGTTTGTATGGTCCAAGTCTTCACCTCTTTAGCTTGGAAATTGTTGGCTTTCCCTTCTTTGACCCGTTCCACTCTGTTTTTTCTCTCTCCCATTCACTTCCACACTATCATCTGAACACTGAAAGGTAGCTTCTTTGTTCACTTTTATGTGCAAATTTTTCTGCTTTTCATTTTCTGCTGTTTACTTAGTGTGTGTGGTTTCTTGGGCAGAGTAGAGTTTCCGGAAAGGTTCTTGGGGTTTCCTGAATTGGGTTGTCAGAAAACCAAGGTGGGTATTTGAGCACTTCTGCAAAATTTGTTTTTTCCCATTTCGTATGTTGAATGAACTCTCCTGGGTTTCTTCCTCTGTCAATTATTCTTGCTTTGCTAGAGTGTGAGCTTTGGTCGACGACTTGAATGTTTTTTTTTTCTTTTTCTTGTTGCTATTGCTTATGTTTACTTTGGATGGTTGACTTGGTTTGTGTGCACTGCTGAACTGTGTTCTTTTTGTTTACTTTACCATTGGTTTTCAGTAAGTGTTCTTGAGAGGGTTGTAGTGCTATGGAGTTTATATGTGGTGCTGTGGCTTGGATTGGATAACAATCTAAGTGGCTTGTAGTCAGTTGCGGTGAGAAGTTGTGATATGTTTTTTTGGTCCTTTTCATATTTTAGGACACAACATAGATACGGTGTTACTTTTCCATCGTAATTGCTGGTTTTCCCCGAAATTCTATGTTCATCTTTAGTTCAAACCTTTTATCATGTGGATTTGCATTGTAAACATTCCAATTCTATGTTCATCTTTAGTTCATAAAGAACCGAATCCAGGTTTTGCCCTGTATTTTTTTTTTAAAAGCTTATGTTAGGCATCACTGTGAATTTTGGCATCTTAGCAAAACTGACACTCAAAGTCCATCAATTATGTGCCATCAAATGAAAAACTACATACAAAGAAGAAAAACAAATACCAAAACATGGGGACCTAATCAAACCTATGCAAGAAAATATACAAAAGCAAACTCCGTCCAAAAGGGTCAAAAAAATAGGTAATTAGGGAGTTGATACATATTATGAAAAATTCCAGATTTTGTCCTTACTATTGATTTTTTTACCTTTTGATATTTGACTGGGTTTGTGTGAGATGCTGAACTGTGTTTTCTGCATTTTTCAGGCTGTTCATGGAAGCGTAGTAGTGCTATGGGGTTTGTATGCTTTGCCGTTGCTTAGATTGTATAGTCATCTTGGTGAGGTGTCTGCATTACTTTCTCTTGGCTTGTGTTTAGGATCTTGGTGAAGA

Gene Sequence:

>Vu_27350(+)