Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27275 LG7 26287643 26291094 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 26287827 upstream_gene_variant
A/T 26287898 upstream_gene_variant
T/A 26287934 upstream_gene_variant
A/C 26287940 upstream_gene_variant
G/A 26287994 upstream_gene_variant
T/C 26288088 upstream_gene_variant
G/A 26288096 upstream_gene_variant
T/G 26288122 upstream_gene_variant
T/C 26288160 upstream_gene_variant
G/A 26288161 upstream_gene_variant
T/G 26288163 upstream_gene_variant
C/A 26288170 upstream_gene_variant
G/A 26288171 upstream_gene_variant
G/A 26288180 upstream_gene_variant
A/G 26288223 upstream_gene_variant
C/A 26288245 upstream_gene_variant
C/T 26288247 upstream_gene_variant
C/T 26288274 upstream_gene_variant
T/G 26288276 upstream_gene_variant
A/T 26288284 upstream_gene_variant
C/T 26288319 upstream_gene_variant
A/T 26288400 upstream_gene_variant
T/A 26288416 upstream_gene_variant
C/T 26288586 synonymous_variant p.Lys257Lys
T/A 26288619 synonymous_variant p.Ala246Ala
T/A 26288623 missense_variant p.His245Leu
T/C 26288627 missense_variant p.Thr244Ala
T/C 26288640 synonymous_variant p.Glu239Glu
A/C 26288828 upstream_gene_variant
T/A 26288829 upstream_gene_variant
T/A 26288871 upstream_gene_variant
T/A 26288950 upstream_gene_variant
C/G 26288958 upstream_gene_variant
T/C 26288959 upstream_gene_variant
C/G 26289037 upstream_gene_variant
A/T 26289060 upstream_gene_variant
G/C 26289079 upstream_gene_variant
A/T 26289080 upstream_gene_variant
A/T 26289083 upstream_gene_variant
C/T 26289089 upstream_gene_variant
G/T 26289107 upstream_gene_variant
A/G 26289133 upstream_gene_variant
G/T 26289173 upstream_gene_variant
A/T 26289197 upstream_gene_variant
T/C 26289218 upstream_gene_variant
A/T 26289234 upstream_gene_variant
A/G,C 26289269 upstream_gene_variant
T/C 26289288 upstream_gene_variant
T/A 26289302 upstream_gene_variant
C/T 26289338 upstream_gene_variant
T/C 26289339 upstream_gene_variant
T/C 26289350 upstream_gene_variant
T/A 26289351 upstream_gene_variant
G/T 26289369 upstream_gene_variant
G/A 26289381 upstream_gene_variant
T/A 26289383 upstream_gene_variant
G/A 26289385 upstream_gene_variant
A/C 26289389 upstream_gene_variant
G/A 26289401 upstream_gene_variant
C/G 26289426 upstream_gene_variant
C/T 26289441 upstream_gene_variant
G/T 26289446 upstream_gene_variant
G/A 26289455 upstream_gene_variant
T/A 26289512 upstream_gene_variant
A/G 26289513 upstream_gene_variant
G/A 26289522 upstream_gene_variant
T/A 26289603 intron_variant
G/T 26289617 intron_variant
A/G 26289770 intron_variant
T/C 26289787 intron_variant
C/T 26289869 intron_variant
A/C 26290005 intron_variant
A/T 26290009 intron_variant
T/A 26290171 intron_variant
A/G 26290176 intron_variant
G/T 26290294 intron_variant
G/C 26290305 intron_variant
A/T 26290328 intron_variant
A/G 26290334 intron_variant
A/G 26290353 intron_variant
T/A 26290422 intron_variant
T/C 26290618 synonymous_variant p.Ser159Ser
A/T 26290706 missense_variant p.Ile130Asn
T/C 26290707 missense_variant p.Ile130Val
A/T 26290729 missense_variant p.Asn122Lys
G/A 26290736 missense_variant p.Pro120Leu
C/A 26290834 synonymous_variant p.Val87Val
T/C 26290908 missense_variant p.Asn63Asp
C/T 26291036 missense_variant p.Gly20Glu
G/T 26291070 missense_variant p.His9Asn
A/G 26291074 synonymous_variant p.Thr7Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27275.1
MAEDNSTDHSHINEDNFLTGIVLEPLDFSFLNSSTTTTMLSYDDNHDNSNSNNVFSMESSYENANFDERHGKMLKSNSSSSIISHDVANNNASSSSSAPSSSTFILSFENSTMEPSHHRPNNDHGSCPRIALCSSLLSSENDHLSTPKAKQGAKKYRSSSEIQDHIMAERKRRQELTERFIALSATIPGLKKTDKAYILREAMIYMKELQERVIELEKQNKRKRSTESRILIKKYSQREEERSTHALPHVEARVLEKEVLIGIHCHKQKDIVLKIMALLQNHHLSLASSSVLPFGTSTLKVTIIAQMDEQYCMTVNNLVKSLRQALLKIT*


CDS Sequence:
>Vu_27275.1
ATGGCCGAAGACAACTCCACTGATCATTCTCACATCAATGAAGATAACTTCCTCACTGGGATTGTTCTTGAACCACTAGATTTCTCATTTCTTAACTCTTCTACCACCACCACCATGCTCTCATATGATGATAATCATGATAATAGTAACAGTAACAATGTTTTTTCCATGGAAAGTAGCTATGAAAATGCAAACTTTGATGAGAGGCATGGGAAAATGCTCAAGAGTAATAGCTCAAGCTCCATCATTTCTCATGATGTGGCTAACAACAATGCTTCTTCTTCTTCTTCAGCACCATCCTCATCCACCTTCATCTTGTCCTTTGAAAACTCAACCATGGAACCTTCTCATCATAGACCTAATAATGATCATGGTAGTTGCCCTAGGATTGCCCTATGTTCTTCACTTTTGAGCTCAGAGAATGATCATCTCAGCACACCAAAGGCCAAACAAGGTGCCAAGAAGTATAGAAGCTCATCTGAGATTCAAGATCACATCATGGCTGAGAGAAAAAGGAGACAGGAACTCACTGAAAGGTTCATAGCACTTTCTGCCACCATACCTGGATTGAAGAAGACAGACAAGGCCTATATACTAAGGGAAGCAATGATATACATGAAAGAACTTCAAGAGAGAGTGATAGAGCTAGAAAAGCAGAACAAGAGGAAGAGAAGTACAGAATCAAGAATATTGATAAAGAAATATTCGCAAAGAGAAGAAGAAAGATCAACTCATGCACTTCCTCATGTTGAAGCAAGAGTGTTGGAAAAGGAGGTTCTCATTGGAATCCATTGCCACAAACAAAAGGACATTGTGCTCAAAATCATGGCTTTGCTCCAAAATCATCATCTTTCTCTTGCTAGCAGCAGTGTCTTGCCCTTTGGAACTTCCACTCTTAAAGTCACAATCATTGCCCAGATGGACGAACAATACTGCATGACAGTGAATAATCTTGTAAAAAGCCTGAGACAAGCTCTCTTGAAAATCACATGA


Promoter Sequence:
>Vu_27275::LG7:26291094-26293094(-)
CCATGGAGTTCTTATGAGTCAGGCTACCGAAAAGTAAATGCATTTTGGTGATATGAGTAGTCAAATCAATTCCTTTAAGCTATCCTTCAACTGTATAGTCCCATACCTATACAGTCTCCAAATCCCTCTCATTCCGGTGTATGTTCGATTCATCCATGTACCCCTTCCACCCGAAGCTGCCAGGAGCCGCTCCTTGTCTGTGCCCCCTGCACCATGCCTCTTGCACCGGCGTCACTCCCCGCCCTCGTCAGTGCCCGGATGTCACACTTTACACTTCTATGTTCGCATTTTGAATATATAATTTGCTAGATTTAAACTCTTGTGTTATTTTTTATAATTTTTAGAAATTGAGACAACTTCGTTAAGAAATTGTAAAGAAGAATATGTGGCTTGTTCTCCCACATATGATAGAATGTATCTCATAGCAGTATAGATATGTCTCTGGTCGAATATATGTCAGACTATTAAGTTAATATGTACTTGATGCATCGATCTATTCTATTATTACAATATTACATAAGACATTTAATTACAATGATCTATGATTAACTACGATAAGTGAGAAACTAACATGTATTTGAACCAATAATCTCATCACATAGGTTAAAGCTTATAAACATGAAATATAAATAACACATCTTATCAAATATGTTAATGACATTCATTAATCACTATATTTATTGCTTACACACTAAGCGATAGTGTTTTCTACATACACGACCTTTATCTAATTCAAGAAAAACAATGTTCAAGAGAAAGACAGGTATCCTATAGACTGAAAGTTAAAAATATTTAAATAATCTTTGGAAGTTTTATTATAAGATACATATTTGACTCTGTAAAAATATTTTATTAACTTTTTTAGAACCCAAATTACACTCAAATTGGCTTCAATATTCATACGTTATAGAAGATTTTTGTGCAACAAAAGTAGAACGTTTTTGCATTATCAAAAGATTATTTCACAAATTCAAGATCAACTCAAAGTTAGAAGATTTTCATTTTGATTTTATTTTTGAATCTGTGATCGGTTTACAATTTCTGAAATTTCTTTACAACACTTTACTGTTACTAAAAAAATATATATGTGATTTAAAATTTTGCAATTTTACAGCAAATTTATATTCTTTGTACTTTAATTTTTTTTTCTTTTTTGATCTTTTTTTCACTAATCGATCAACTTATTTATTCACTTTTCAATAAAAAGTTAACAATGAATCGGATGAGATTGGAGAAAGAAGACAAATTAATCAATAAGTTGAAAACAAAAGAACAAAAGTAATATCCACATTATATCTATCTTGATAACATTAAACGATACTATATATAAACCAAAATGAACGTTATTCTAAACACTAAAAAAAACAAATTATTTTTAGTAAATATCTAGTTTATAACATTTAAATTTACTTAATTAAACCTTTTTAAGTAATAAAATAGTTTTTGATCTTCTATCATTTTAAAGTGTTTGAGAAAAAAAGAATCTAATTGGTGGATCCTCATAAAGCAGATCTTACTAGTGTTCACTGCTTATGATTGCCATCATGCAGAATGCAGTGAGCCCAATGTCTAAATAATTGACATCCTTAATTTGAAAGAAGACAATGTTGATTTTTGCAACAAGGGTTTGCATCCCCATGACAACATTTTCCACAGATCATCACACTTCATCCAACGGTGGAAATTGTCGTCGCATGAATAACGTGGTCGTCTCTTTTTTCTTGTCTCCATTGATGAAGGTTTTTCTGTATACCTTAAAAGACTGAAACCTTGGACTCGGTTGGCCAAAAGATCAGTTCTTCCACTTTCCTTTCAATGGAAGACTCGTGGGAAAATTGGATTTCTTCTTTGGTAATCACCCACCAATAAAAAACACTTTTTTTCTTCTATCAATGTGATTATCGTCACATCTTAATCTCAACTTTTTCTATGTTATCTTTATCTTCTTTTGACTCTTTCTGTTTGGTTTTTTCACACTGTTTTGTTTTCTGTCATAGGAA


Gene Sequence:
>Vu_27275(-)
ATGGCCGAAGACAACTCCACTGATCATTCTCACATCAATGAAGATAACTTCCTCACTGGGATTGTTCTTGAACCACTAGATTTCTCATTTCTTAACTCTTCTACCACCACCACCATGCTCTCATATGATGATAATCATGATAATAGTAACAGTAACAATGTTTTTTCCATGGAAAGTAGCTATGAAAATGCAAACTTTGATGAGAGGCATGGGAAAATGCTCAAGAGTAATAGCTCAAGCTCCATCATTTCTCATGATGTGGCTAACAACAATGCTTCTTCTTCTTCTTCAGCACCATCCTCATCCACCTTCATCTTGTCCTTTGAAAACTCAACCATGGAACCTTCTCATCATAGACCTAATAATGATCATGGTAGTTGCCCTAGGATTGCCCTATGTTCTTCACTTTTGAGCTCAGAGAATGATCATCTCAGCACACCAAAGGCCAAACAAGGTGCCAAGAAGTATAGAAGCTCATCTGAGATTCAAGATCACATCATGGCTGAGAGAAAAAGGAGACAGGAACTCACTGAAAGGTTCATAGCACTTTCTGCCACCATACCTGGATTGAAGAAGGTTACTTTTCTACTCAATTCAATGATCTTCTTCATAGATTTTGTTCTTTGTTTCTTTACAAGTTTTCTCACTTTTCAACACTTCAATGTGTTTGGAAATCCAAACATAAATCTAGTCTCACTCAGAAATAATAAGAAAGCTAAATAACATAACGATCATAACACATAAAATCATTGTTTTCTCTTCTAATTAATAAGCCCATAACAATGTGCTCAATTCACATTCAATTTAGTATCCTTAAAATTTGCTTTCAACAATAAAATTTCTACATGATTTGAACATGTTGTATTAGGATGAAGACAATGATCAGACAGCTGAAGAAAAAGCAGATTCTTTGTCTGATTATTACTGAAATTTATTCCCTTTAAGAAGTACTGCTACATCTTACAGGAGTAGCATTTAATGTGTCTATATACACAAAGAATATTTTCATTTCGTGTGCCAGAAAATAAGATTATAATAAATTTTATATAATAACGTAATATATGTTAAAAAAAGTATTGATGACATTTTTCTAAAGAAGGTTTGTAGTGTTGATAAAAGACAATGAACTATGAATGATAAAAGTGCATGCGTGAAGAGGACCCATTCCATGGTTCCATGGCATAGTTTTGAACTTCAAAAAATAGAAAGTGCATTGCATAGTATGGTAGAAAGAGAAGTTGTAATGAAACAGCTTTCTTTGCAGAGAAAGCAGGCCACTGTAGCAGAAAGACAAAGCTGTTTTCCTTAGTTTTACAGCACTTTTTGGACTACTTTTTCACCTTTTTCAGCAAAGCTTTCTGCACTGTTATTTCACTTTTCTTTTTCTTCCTTTATTCTAAGAATTAATCTCTCATATTTCATCATTAATTGTGGATTAAGTTTCTCAAATATGTATTTTATTACTATTTCATGTTTCCGTTGTATTAATTAAATCTGATTATCATTGTTATATGCTGTCAAAAGTTTCATTATTATTTGAATTTAGCACTTTGACATATTCAGAGATTAAAACTATATAACTAAAATATTTAAAAAATTAATTAAGGTATATAAAATTTAATCAATAATATAGTCCAAACCTACTAAGCTTGCGACATTACAATACCTGCAGAACAATACAATTAATTACATGCTATAATTTTCTTTAGCTATCAGATTCTTCTGCCTATTGTCTAAAGTAAAAATATTATTTTAAGTACATCATATTATCAAGGATAAAAAGAGTTATGCTATGTCTTGTTTAGGATTTAGTAGAGGGTGAGCCTGGAAAGAAAGAGCATGAATTTAATTGAAATTCTTTGATAAAAAAGAAAAAAAAATGATTGAGTATAATTAGTATATTTTATTTGTAGGTTAAATACGTTTTTCAATTTTCAATTATTATAAAAAAAAATTATAAATCATTTTGATCAACTTATGTAAAATACATTCTAACAAATGATACGTAAAGTATTCTTTATGTAATAAATGAAGTTTCACTTATAATATAATCTCCAGACACTCTTTATTAAAATTAATATTTTATATAACTTTCATAAAATTCAAGATGAAATAATTTATAATTTAGTTTACAAAGAAAAGAAATATATTATAAAGTAATGTCTAAGTGAGACCTTAATTTGTAATTTTGATTTGATGAATGTTTTGATGTGTCTATCTTTGATATACATAATTTGTTGCATCTTATAATACAGAAAAGAGAAAATATATGTTTAAATTATACATAACTTGACTTGTAAAGATGAATTTATAGACAGACAAGGCCTATATACTAAGGGAAGCAATGATATACATGAAAGAACTTCAAGAGAGAGTGATAGAGCTAGAAAAGCAGAACAAGAGGAAGAGAAGTACAGAATCAAGAATATTGATAAAGAAATATTCGCAAAGAGAAGAAGAAAGATCAACTCATGCACTTCCTCATGTTGAAGCAAGAGTGTTGGAAAAGGAGGTTCTCATTGGAATCCATTGCCACAAACAAAAGGACATTGTGCTCAAAATCATGGCTTTGCTCCAAAATCATCATCTTTCTCTTGCTAGCAGCAGTGTCTTGCCCTTTGGAACTTCCACTCTTAAAGTCACAATCATTGCCCAGGTGATTACAAATTTCATTTTTTAAAAAGTTTGAATAAATTTAATAAAGTTCATAAGAAAAACAACATTCACAAACCTTAAACTTAAGGTTTTGTGTTAAAATTGATGTGTGTTTTATATGAATAACTCTAAACTTTAGAGTAAAATTAAAATTTTTTTTTATATGAAACTTTAATATATTTTAATCTTGGAGTGAATTGATATAATATTTTAATCTAATTATGTTAAACTTTTTATGTTTCAAACATATTTTTGAGTTCATATTTAACGAGATGTATCATATTGTAAACAACTTAAATACTAATAAAAAAATTTAAAATAATTGACTTAAAAGAACTATATTCATTTATTATTAAAATTTGAAGACTAAAATATATCAAAGTTTTAGATTTAAACGAATTCTAATTTTACTTAAAAATTTAGAGATTAAAATCATATTTTCATCCATTTTTATTCATAATTTCTTAAGGTGAAACCTTGAATAAGTTTAACTAGAATGTGCATCATACGTTGTTAAATTCCCTTAGATAACATGATAGTTTGTCACTGTGATGCTGTTATGTTATTGATTAACATTGTTACTTCACTGTCTATTTAGAGAAAATTGAGAATGAATTACTATGAAGAAAAGTTAAAGAAAAATATTGGTATGAGAATATGTATTGTCCATGCAGAGATAATAGTTTTACTTTCTGAGTTAATTTTCTTTGGTTTTGTTGCAGATGGACGAACAATACTGCATGACAGTGAATAATCTTGTAAAAAGCCTGAGACAAGCTCTCTTGAAAATCACATGA