Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27241 LG7 25929108 25930406 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 25929110 splice_region_variant&synonymous_variant p.Gly176Gly
G/A 25929126 missense_variant p.Thr171Ile
A/G 25929177 missense_variant p.Phe154Ser
G/A 25929354 intron_variant
T/C 25929359 intron_variant
T/C 25929447 intron_variant
T/A 25929517 intron_variant
A/T 25929609 intron_variant
A/T 25929764 intron_variant
A/G 25929774 intron_variant
A/T 25929834 splice_region_variant&intron_variant
G/T 25930008 intron_variant
A/T 25930014 intron_variant
A/T 25930033 intron_variant
T/C 25930072 intron_variant
A/G,* 25930191 synonymous_variant p.Thr72Thr
T/C 25930263 synonymous_variant p.Gln48Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27241.1
MEGERGVNPSYDLQVSFSNTPQAIHEMGFVQFEENQVLSFLTPSAQSQSSQLSQSLTGGNTVTAATVTTTITTTTTSGSVGFNHNDLASRSSWNNEQVRTLDPKAVNDENCTGNTSDGNNTWWRNSGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR*


CDS Sequence:
>Vu_27241.1
ATGGAAGGAGAGAGAGGTGTTAATCCAAGCTACGATCTTCAAGTTTCATTCAGCAACACCCCTCAAGCAATCCACGAAATGGGTTTTGTCCAATTTGAAGAAAATCAGGTTCTTAGCTTCCTGACACCCTCAGCTCAATCCCAATCTTCTCAGCTCTCACAGTCTCTAACCGGTGGCAACACCGTCACCGCCGCCACAGTCACCACCACCATCACTACCACTACCACTTCTGGATCAGTTGGTTTTAACCATAATGACCTTGCATCCAGAAGTTCTTGGAACAATGAACAGGTTAGAACACTGGATCCTAAAGCTGTCAATGATGAAAATTGCACCGGAAATACCAGTGATGGCAACAACACATGGTGGAGAAATTCAGGGTCAGAGAAGAACAAGGTGAAAGTGAGGAGGAAGCTGAGAGAACCAAGGTTTTGTTTTCAGACAAGAAGTGATGTTGATGTTCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAACAGCCTTCATCCAAGGTAA


Promoter Sequence:
>Vu_27241::LG7:25930406-25932406(-)
AATCTCATCTTACAAGTTGGTTTTGTGGGATTGAATTAGGTTTAAAAAACACAATTAAGTGGGCTTATTTTCTTTATCTAATAAACCTCATTGGTAATGTTATAAAAATTATATATAAATTTTAGTCATTGAAGACAGTGTTTTAAAAATAATGATATTGCTAACACTGTTAGAAAATCATTCTCGGTTCAAAGGTCCATATACATAATTGGTGCACTAATAATTTTTTCAGATAGGGACCAAATTCAAATTCAGCAATAATTGCCTAAAATATTTTAAATTTGTCTACTTAAAAAGTTGAAAGTATACAACAATGGAGTCAAATTAAAAGAAAAAAAAATTGGTTTCACATATAAATGGTTAGAAACAACAAAAAACTTTACGTATATACATGAAATTAGAAAACCAATTACAGAGATCTTAAAAATCTTAAACACCAAAATCGATTCAACGAATATCTACATCACAGACAGCATTAGGGTTTTCTAGATCGTCCAACTGCAAGTTGATCACGTAATTAACAATAATTGAGTGTTACAATCAAACTACAATAGTTTGTGCAATCAATCAAATACTTCACAGTTTACATAATTTTTTTCCATGAAAATATTTTTAAAAAAGGGTTAAATATGTTTTTAGTCCCTAAACTATTGACCGTTTCTGGTTTTCGTCCCTCTTCCAAAGTAAGGTACAATTTAGTCCTCAATCTTTAAAAAACGTTCGTTTTAGTCGAAAAAACGAACGTTTTGAGGACTAAAACGAGAACTAAAAACAAAATTTTGAGGACTAAAACGAACGTTTTTCTAAAGAATGAGGACTAAATTGTACCTTACTTTGGAAGAGGGACGAAAACCAGAAACGGCCAATAGTTTAGGGACTAAAAACATATTTAACCCTTTAAAAAATTATAAGTAATAAAATATAAAAAACACTTCGATGTTCTAACCCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACATATATATATAATCCAAGCTTGTATAGATTCTATGTAAAATATCTCAATCAACAGCATATAATTAGAATGTGTATAACCACAAAAAAAAAGAAAAAAAATGAGACAACAAAAAACTTTATCAGTAAAAAAATTGATATTTAACTACACACCACAACATTTTTACACTGCACAAATACTGATTAGGGTTGAAGTGCATGTATTATTATTTAGTCAGTGGCTTGGTAAATAATTATTACGAAACCCATTAACAATATATTATAGATCAACTTGTATGGAATTGTTTCAAGAAGATTAATTAAAAATATAAATTTTTGAACTTCAAAACTCTATGTTAAATAGTGAAAAAAAAAACAAAAAAGTTTTATGACTAGTAATAATATCTTGTTTGATTCGAAAATATGACACATGATGTCTAAAAAAACTACTATTGATATGCATATATACCAAGAAACAACTTACATGGTAATCGATGAGTATAAACCTGGCGTGATGTGAAAGAATCATTTTGGTATAAAAACGACAATACCTAGTTTCATTCCTTCTGGCACTTGTTGAAGATAGATTCCACATGAAAAACACTTGTAGGACACTGCACGTGTAATCCAGAGAGAGAAAGAGTGTACACAAGCCTTTGAATAGACTCCGTTAACCATGGGCTGAAGGAATAAAACATTCCCTTCAGAATTTAATTGCCAAACACAAACACAAAAACAACCTACTTCTGTTGACCAAACCTCAAACACCTTGTTCTTGTTCCTGTTTCTGTCTTCTCAAATCCACCCTCTTTTTCCATGTTCACATGGCCTAGAATTTTCATGTTCTTCACCACCCCTCCAAGATTCACCTACATATCAACAACATAAGACCAAGAAAAAACCAAAAATCAAGGTTGTTTCAAAAGGGGTT


Gene Sequence:
>Vu_27241(-)
ATGGAAGGAGAGAGAGGTGTTAATCCAAGCTACGATCTTCAAGTTTCATTCAGCAACACCCCTCAAGCAATCCACGAAATGGGTTTTGTCCAATTTGAAGAAAATCAGGTTCTTAGCTTCCTGACACCCTCAGCTCAATCCCAATCTTCTCAGCTCTCACAGTCTCTAACCGGTGGCAACACCGTCACCGCCGCCACAGTCACCACCACCATCACTACCACTACCACTTCTGGATCAGTTGGTTTTAACCATAATGACCTTGCATCCAGAAGTTCTTGGAACAATGAACAGGTGATATAAGTTTATTCTTATGTCTATATCTATCTATTCATGTAAACTACGATCTTTTACCTAATTATAGGTTTTTGTTTCTTGTATTTATTCGTTTTGTTTTTATGCAAGTCTCTTTCAATTTTAGGGTATGCTGTTTTGATCACTTTTCTGTGAAACGGTTTTTGCTTATTATATAAATGGTATACCATGAACTTTCAGGTTAGAACACTGGATCCTAAAGCTGTCAATGATGAAAATTGCACCGGAAATACCAGTGATGGCAACAACACATGGTATACTCAGTATAACATCTTCTTGCAAACACAACTTTCTGATTTCAATCTCTCTCTCTTTCTCTCTTTCTCTCTCTCTCTCTCTCTGCATGCACGTAAATATTTAATTTAGATGCCTCAGAAGATATTCTTTAGGTTTCTGCGAAGAATCTGAAGGTCTCTACCATATATGGAAGTGACTGCTTCTTTTTCTTTCTGAGTTTGCTTTTGTACTCCAAGTTATTCTCTCTTTCTCTCTCTCTCTTTTGGGGTATGAGGAAGAGCATGGTACTCAAAAGTCTTGATACTCATTGATACTCGAATCCACTAGTCCATCAGCCTTCATATATTCTTCAAACAGATCATAATTTTATACTTTTGCTATCATCTTTAGTTTATTAACTTTCTGGTTTAAGGTTAATTAATCCTGCTTTGAACTGATTAAGAAAAAAAAAGCCTGTTTAATGGAGAAGAACTTGAGAATCAAGTGGCACATCTATATATATACATATAGATATATATAGACAAACACATGAGGATTTGTATATATATATCAGTATGTTGAAACTATATGTTATGTGATGGTAGGTGGAGAAATTCAGGGTCAGAGAAGAACAAGGTGAAAGTGAGGAGGAAGCTGAGAGAACCAAGGTTTTGTTTTCAGACAAGAAGTGATGTTGATGTTCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAACAGCCTTCATCCAAGGTAA