Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27185 LG7 25237573 25238364 PREDICTED: ethylene-responsive transcription factor 13-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 25237683 3_prime_UTR_variant
T/C 25237728 3_prime_UTR_variant
C/T 25237739 3_prime_UTR_variant
G/A 25237842 missense_variant p.Pro161Ser
G/A 25237848 missense_variant p.His159Tyr
G/A 25237849 synonymous_variant p.Cys158Cys
A/T 25237891 synonymous_variant p.Arg144Arg
A/G 25237918 synonymous_variant p.Ala135Ala
C/G 25238082 missense_variant p.Gly81Arg
C/G 25238283 missense_variant p.Val14Leu
A/G 25238311 synonymous_variant p.Asn4Asn
A/G 25238344 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27185.1
MNFNTTLESHDYAVLQSIQRFLLDDTQDLNALTAVLAAPNAVSPVGSGGGSTSTLFTTAINMEERPSTSTEAREEHTAARGECTEAGGGHASYQRFKGVRRRPWGKFAAEIRDPKKNGARVWLGTYDSAESAALAYDRAAFEMRGSKAKLNFPHLIGCHEPSQKENG*


CDS Sequence:
>Vu_27185.1
ATGAATTTCAATACCACTCTCGAATCCCATGATTATGCTGTTCTTCAATCCATTCAACGCTTCCTCCTCGACGATACCCAAGACTTAAATGCACTCACGGCAGTTTTGGCCGCACCCAACGCCGTTTCACCTGTGGGGAGCGGCGGCGGATCCACGTCCACCCTTTTCACCACTGCCATCAACATGGAAGAGCGACCAAGTACTTCCACGGAGGCGCGTGAGGAGCATACGGCGGCGCGTGGGGAATGCACGGAAGCGGGCGGTGGACACGCGTCTTACCAGAGGTTCAAGGGAGTGAGAAGAAGACCGTGGGGAAAGTTTGCGGCTGAGATAAGAGATCCAAAGAAGAACGGGGCGAGAGTTTGGCTTGGGACTTACGACTCGGCTGAGAGTGCGGCTTTGGCTTACGATCGAGCCGCTTTTGAAATGCGTGGCTCCAAAGCTAAGCTTAATTTTCCTCATTTAATTGGATGCCATGAGCCGAGCCAGAAAGAGAATGGCTAA


Promoter Sequence:
>Vu_27185::LG7:25238364-25240364(-)
TCGAAGTGCCTTGTTGGCAGAGACACCACACATTCTCCACTGCCTTACCCCTTTTTCAATATAACTAACACTTTCACCACACAACAAGTATCAACATGGAAAAGAAAAAGTGAAGTCTGGGATGCAGATTTTTCTATGTCGCGTGAGCGCCAAAATTGAAGCAGGGAATGAACATGTAGCAGTTGGTGAAGCGTTTGACGATGACTGACTTGGCTGACGATGGTCTTAACTAGACAAATGGATTAATGAATGCGAGGTTCAATTTTCGCATGAACTTATATCATGATGAGTGTTCTTGGAATAGTGACTAAGTTCTCCATTAGTCGAGTTGCCGACTAGCCGAGTTGTCGAATTGGCCGAACTTGAGAAAATTGTTGTTTATCAAAGGATTTTTCAATTGATAATTATTGACAAATTTTTCTTTTAATAATTATTGACAAATATAAATTTCTATCAATAAATATTACTAACAATACTTTTATCGATGAATTTCAGTCTCTTAGAAATTCATTAAAAAACTATTAATGATAGATTTTTAAAGTTCTCAACAAATTTTAAACATCGATGATATTTTTTTTTTCATAGTGACATACATCTAAAAAGCATAGAAAGGTATAATAGTAATTAAACTTGTCAAATTAACTCATTTTATAGGATTTGACCCTAACACATGGGCTAGGACCAAAAAAGCCCATCTCTTATTAAAAAAGTTTACAAAGCCAAATATCCATAAAGTCTTATGGGTCAAGACCAGCCTATAAACCTTCTTTTTAGCATGAGAAAAATATATAATAAACCAAAAATTTGGAAATAATTAAATATAAGTGAAAAAACATAAAATTATAATAAATTGAAGATCCATATCATAAATATAAAATAAAACACATTGTTCATGATATATCAAATAAAACAAAATATTCCAATTTTTGCTTTCAGTCCAATAATTGAGAAAAATGATCCACTTTCAAATTGTCAATATCCTCCATGATATCAAATGGAAGAAACATCTCCACAACTTTGATAGATTTGACAAGAGATAGTTTAGCACATACAACAACTCCTCTAGCAATGACTCCAAATAGATCTAAAACTATTATCTATAGGGATTAATAGAATTAAGAGGGAGAGTTGTGCAACATGCTTCTCAATGATGTTAGCACTTTCTTGTACTTAAAAGATAAGATAATTTCACATTTCATTTATAATATATGCTTAAAATATGTCAAGTTCCTACAGTGTGAGCTAAAAGGATGGGGTCTAGCTCTATGAGATCAGACTGACCTTGGAACTCAAAGATAAATTAACAGCTCTAATAGTAATACAATCAAATAAAAGATAAATAACATAAAAATTGTGTTGAAAAAAAAAGTACTTTTTTGATAAAGAACAAACATTCAAAATGATTAATTAAAAATAGATTAAATTAATTTGACATATTAACTGTCTAGGTTTTATAGGAGATCAAAATACTAATTTCTATCAAATAACTATAACATATTATTACAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATTCATTTCTCGTTTTCATTACGTGTTATTTTCATTAATAAAATAACTTTAAATAATAAAACGACGTACATTTTTCGCCTTAAATATTAATGCAACATAATCTTTATTATTAGTTTATTAAAAGAAATTATTTTAATTTTATTTAAAAAAAATATGAGATCTGATTAATAACATCTAAAGTAGAGAAACAAAATTAAAAAAGTATTATTAAAAAAATATTTGAAAATTAAGTACAAAGAGATATTAAACATTATTATCATAATTTATTTTTGTATTTTTCACGTGGTTGAAATTTTTTGGTGAATAAAAAATGTCTCAAAACCCACTTTGCACGTGCTTTAACGAGTAAAGGATGGTTCTAAGAAATTGTCCCAAAAATCTGACAAAATACAACCTTAGTCGTATAAATATAACACATTATACTCCTAAAACGC


Gene Sequence:
>Vu_27185(-)
ATACACATATTTCATTTTCATGTTCCAGAAGACCAAAATCAAATGAATTTCAATACCACTCTCGAATCCCATGATTATGCTGTTCTTCAATCCATTCAACGCTTCCTCCTCGACGATACCCAAGACTTAAATGCACTCACGGCAGTTTTGGCCGCACCCAACGCCGTTTCACCTGTGGGGAGCGGCGGCGGATCCACGTCCACCCTTTTCACCACTGCCATCAACATGGAAGAGCGACCAAGTACTTCCACGGAGGCGCGTGAGGAGCATACGGCGGCGCGTGGGGAATGCACGGAAGCGGGCGGTGGACACGCGTCTTACCAGAGGTTCAAGGGAGTGAGAAGAAGACCGTGGGGAAAGTTTGCGGCTGAGATAAGAGATCCAAAGAAGAACGGGGCGAGAGTTTGGCTTGGGACTTACGACTCGGCTGAGAGTGCGGCTTTGGCTTACGATCGAGCCGCTTTTGAAATGCGTGGCTCCAAAGCTAAGCTTAATTTTCCTCATTTAATTGGATGCCATGAGCCGAGCCAGAAAGAGAATGGCTAAAGGGGATTTAATGAGTGGCGCCAAAATTTAAAATGAGTTGAGCTGAGTTAAATTGAACGATTCAGTAGAATATGAAGATGTGTATGAGTCATATTTATGGTTTATTTTGAGAAAAAAATTATTATAAAATTTCATGATATTTATCAATATATAAAGAGAACATTTAAGTATCTTATTATGTTCTTTCGTATTTTTGCAGGGTCATTCTATGTATAATTGTTTATAAGACTTTCTATTTTTCTTAGT