Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_27155	LG7	24971701	24972504	hypothetical protein	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
T/C	24971988	missense_variant	p.Thr173Ala
G/A	24972006	missense_variant	p.Leu167Phe
G/A	24972112	synonymous_variant	p.Leu131Leu
T/C	24972414	missense_variant	p.Thr31Ala

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_27155.1

MRKRSNMENGADFFNSFASTSTSTTSTTTTTATTTPSIFIDTTNTSISSTSSSSSSSSSSTSNSSNSDSCTKQHSKTPTTSQTLLENEKESKGCCKKRKLENPSYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPTPASTSPKDIQAAAAKAANTPFDVNHCQSTIEDEEGQEEEPRQAQNVSSSSSNSNSTNDDDTLFDLPDLFPDELCSSSWHLCAVGSGFRLEESLFWENY*

CDS Sequence:
>Vu_27155.1

ATGAGAAAACGTAGCAATATGGAAAACGGTGCTGACTTCTTCAATTCCTTTGCCTCAACTTCCACTTCTACCACTTCTACCACCACCACCACCGCCACCACAACCCCTTCAATCTTCATTGACACAACAAACACTTCTATATCTAGCACATCATCGTCATCATCGTCATCGTCATCTTCAACCTCAAACTCCTCAAACTCAGATTCATGCACCAAACAACACTCCAAAACCCCTACCACTTCTCAAACCTTGTTGGAAAATGAAAAGGAATCAAAAGGGTGCTGCAAGAAGAGGAAGTTGGAGAATCCTTCCTATAGGGGTGTGAGGATGAGGAACTGGGGCAAATGGGTGTCTGAAATCCGTGAGCCAAGGAAAAAATCAAGAATTTGGCTCGGAACATACCCTACTGCAGAAATGGCTGCTAGAGCACATGATGTAGCTGCTTTAGCCATCAAGGGTCATTCTGCATACCTCAATTTCCCCGAATTGGCTCAAGAACTTCCGACACCAGCTTCTACTTCACCTAAGGACATTCAAGCTGCAGCTGCAAAAGCAGCAAACACACCCTTTGATGTTAATCATTGCCAAAGTACTATTGAAGATGAAGAAGGACAAGAAGAAGAGCCACGCCAAGCACAAAATGTCTCATCTTCAAGCTCAAACTCAAACTCCACCAATGATGATGACACTTTGTTTGATCTACCAGATCTTTTCCCTGATGAACTTTGCTCTTCTTCTTGGCATTTGTGTGCAGTTGGTAGTGGATTTAGGCTTGAAGAGTCACTTTTTTGGGAGAATTATTAG

Promoter Sequence:
>Vu_27155::LG7:24972504-24974504(-)

AATGTAAAAGAAAAACACAAAAAGAAGGAGATAAATAAAGTAGATGATAATGGAATATAAAATAAAATATTCTATTTTATGTGAATTAAATACAATCAACCTAAAAAATAGTTTTATGTCAATTAAAATTAAAATTAATATAGAAAATATTTCAACATTTATGATCTAATATACTATACTGCAGATTAGACCCATTATAAATAGTCATTAATTTTTTTATTAGTAGTTTACACTAAATACCTAGAAGAAATTATTGTTCATAATTATGACATCTATCTTATTCTAGAATATATCAAACGAAAGATCTAAGATACACGATCTGTAGAAGAAATTTGGCATTGCTTTAGACAATTAAACTTGATAGTCTTGCAATTCTTTGACGCACACGACTCAAATGCTCAGAATGGGTTGGCAAAGATTTAGAATTTCTACACAAAAATGGAACCATAGAAGAAATATCAAGATTGAACACACCTGCTTGCGTACATAGTTGACCATTGGACCAGAATTAAAAAGGGAATTCGAGCCAACAATGGCCCACAGGCATGTGCACCATGTGTACGTGAGCCATGTTTTTGTGCTTAAAACCCTTCTTATGTCAATCTAAACCTTAATCAATAGTTAAACAAAGACACAACAATTGACAGTTAGCAATATAAACATAATACATGTCACTGTTTCGTTCTCTCAATACTACAATTCAACTCAATTAATATGATGTTTTTATAGGGAAAATAAACTTACAACAGTTTTGTTCATGTGTGTTGCGTCACTTGTCTTCTTCCTACATTACCAAAACCCACGTGGGCCTTCTCAAGTGGTGAATTGCAGAAGAAATTATTATTGGAATATTGATATTTAATTGAGTTCATTTTCCACCAGCTATATTGACAACAGTCCTGATTCGATTGGTTGTGCCAAGTGATCACAACTGGAGAAAAAAAATTTATGCATAATTAATCAAACATTGAAAATGGTACACCAATCTCAAGCAGAAGGCCAGATCAGGCTAACACATAATTGGGTCAAGTTGAACAAGACACATTAACAAGCTGATCATATAAAAAAATTCATTTCATTGGGGGCATTGATACTGTCTCCTGAGTTAAATAATTGTATAAAACCATACCACAAACGAAAACGATGAAATCAGACAAAGTATTAAAAATTAGGTGATGTATTTATTGTAATTTAAGATTTTACTATAATTTGATTAGATTAACAATTAACTTAACGTTGAAGTACTTTACCTGTATAACATGAAACGTTTAAAACTTAAATAAGAAAGGAATTTGACCAAGAATGTTCAAAATATTCTAGAAAAATGTTTTGTAAAAATCATCTACCCAACTAGAAACAATTATGATAGATGAATTTAGTTATATAAAATTTATACAAATTTGTAGTTATATACATCACAATAAAGAGAAAGACCTTATAAAAGGTTGAGATGAAAGTATTAAAGAATTTATGGGGTTTGGTGTGCTCTATTTTTGAGGACCTAGCTGGCCACCCCACAAATCAATAATGAGAGTTTTAGATAAACTAGAATGAAGGGTGATTATGAAAAAATCATGGTAGTGAAATTAAGGTCCTACCACTTAGGGAAGGACCCCAAAGAGGGGTTTCTCTTAAAAGGAAAACAACTGTGGAAACACATGAGAGTATAAAAAGAAAGGAAAGCTATGGCCACCATAGAATGAAGACACTAGAAAAAACCAGAAGTAAGTCACAAACAACACCAACAACAACATTGGACTATAGAGTTAAGCTTAATCACATTATTCAATTCCCACATGGAAAAACAAATTAGCTGAATGTAGCACAACTGTGCCTAATGGAACCCATGTTTCTTTTTTATATTCCTTTTTTTAAATGATTTTTTTTTTCTATTTCTTTTTTAAGAGAATCATGATTCCAAGGCTTCCTTAGCAGGGTCTATTTATTTTTGTGCACCCTCCACTCATTCTTTCTGTACCACACCAATCAAGGTCCCAACC

Gene Sequence:

>Vu_27155(-)