Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27122 LG7 24620751 24623338 PREDICTED: putative receptor protein kinase ZmPK1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 24620764 missense_variant p.Thr5Ile
A/G 24620765 synonymous_variant p.Thr5Thr
G/A 24620775 missense_variant p.Ala9Thr
A/G 24620793 missense_variant p.Ile15Val
A/G 24620828 synonymous_variant p.Leu26Leu
T/C 24620829 missense_variant p.Ser27Pro
G/A 24620986 missense_variant p.Arg79His
A/G 24620990 synonymous_variant p.Pro80Pro
G/A 24621100 missense_variant p.Arg117Gln
A/G 24621106 missense_variant p.Gln119Arg
A/G 24621151 missense_variant p.Gln134Arg
T/C 24621158 synonymous_variant p.Ser136Ser
G/C 24621184 missense_variant p.Ser145Thr
T/A 24621727 upstream_gene_variant
G/C 24621786 upstream_gene_variant
T/G 24621788 upstream_gene_variant
A/G 24621800 upstream_gene_variant
G/A 24621881 missense_variant p.Arg340Gln
C/T 24621889 stop_gained p.Gln343*
C/G 24621906 synonymous_variant p.Val348Val
A/G 24622602 synonymous_variant p.Pro580Pro
G/T 24623037 upstream_gene_variant
T/G 24623195 stop_gained p.Leu663*
T/C 24623275 missense_variant p.Ser690Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27122.1
MAPSTLSFALLLSLIFFHNFHASSSLSLSVENFKEDVIVSSPQKTFTAGFYAVGQNAFCFAIWYTRSPDTVVWMANRDRPVNGKRSTLSLLTTGNLELTDAGQFQVWSTNTAAESNRVQLRLYDNGNLVLLESQNSSSEVVIWQSFDFPTDTLLPGQPLTKSGSLVSSRSGSNYSSGFYRLFFDSENVLRIMYQGPQVSSVYWPDPWLQNNNFGNGGAGNGRSTYNDSRVAVLDDLGHLVSSDNFTFRSIDYGTVLQRRLTLDHDGSARLYSKKDGEEKWTMAGEFRSHPCYAHGICGANSYCRYDPPSGRKCSCLPGHSWVDSKDWSQGCEPTFEHLCSGNNRTENESRFLRIPDVDFYGYDYGYFGNYTYQQCENLCAEKCECRGFQHSFSVENAFFQCYPKTHLRNGNSQPGFTGSFFLKLPSSSRDEFENNIQNNGLVCGGDDEEAEMLNRLYVQGGENGSVKFMLWFASALGGVELVCIFLVWCFLFRNNKTLPSGAEGQGYVLAAAAGFRRFSYSELKQATKGFSEEIGRGAGGTVYKGVLEDNQVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLICMLGYCAEGKHRLLVYEYMENGSLAQNLSSGVQITELEAESPHHERLVTWVREKRMKGSENGSSWVDQIVDPALGSNYYMNEVEILATVALECVEEEKNARPSMSRVAEKLQSHMHTIVDVFNKE*


CDS Sequence:
>Vu_27122.1
ATGGCACCTTCAACACTGTCTTTCGCTCTTCTCCTTTCTCTCATATTCTTCCATAATTTCCATGCTTCGTCTTCTTTATCTCTTTCCGTCGAGAACTTCAAAGAAGATGTCATAGTGTCATCACCTCAAAAAACATTCACAGCGGGCTTTTACGCCGTCGGACAAAACGCTTTCTGCTTCGCAATATGGTACACGCGCTCCCCGGACACCGTCGTTTGGATGGCCAACCGGGACCGTCCAGTAAACGGAAAACGCTCCACGCTATCCCTTCTCACGACCGGTAACCTCGAACTCACCGACGCTGGCCAGTTCCAAGTGTGGTCCACCAACACCGCCGCCGAATCCAACCGAGTCCAGTTGCGTTTGTACGACAACGGGAACCTCGTACTCCTCGAAAGCCAGAACAGTTCCTCCGAGGTTGTGATATGGCAGAGCTTTGATTTCCCAACCGACACGCTTCTTCCTGGTCAACCTCTGACTAAGAGTGGCAGCTTGGTTTCCTCGAGAAGCGGGAGTAACTACTCCTCCGGTTTCTACAGGCTCTTCTTCGACTCTGAGAATGTTCTTCGCATCATGTACCAGGGTCCTCAAGTTTCCAGCGTTTATTGGCCGGACCCTTGGCTTCAGAACAACAACTTCGGGAACGGTGGCGCCGGAAATGGCAGATCCACTTACAACGATAGCAGGGTCGCTGTGCTTGATGATTTGGGGCACCTGGTTTCTTCCGATAACTTCACTTTCAGAAGCATTGATTACGGCACGGTGCTGCAACGGAGGTTGACCCTCGATCACGACGGTAGTGCGAGGCTGTACAGCAAGAAGGATGGGGAAGAGAAGTGGACAATGGCGGGGGAATTTCGCTCACATCCGTGCTACGCTCATGGGATTTGTGGGGCTAACAGTTATTGCAGATACGACCCTCCCAGTGGTAGAAAGTGTTCGTGCCTCCCAGGTCATTCTTGGGTTGATAGCAAAGACTGGTCTCAAGGTTGTGAACCAACTTTCGAGCATTTGTGCAGCGGCAACAACAGAACCGAGAACGAGTCTCGCTTCTTGCGCATACCTGATGTTGATTTCTACGGATACGACTATGGCTACTTTGGAAATTACACCTATCAACAGTGTGAGAATCTCTGCGCGGAGAAGTGCGAATGCAGAGGGTTTCAACACAGCTTTTCCGTGGAAAATGCTTTTTTTCAGTGCTACCCAAAGACGCATTTGCGTAATGGGAATAGTCAACCGGGTTTCACGGGATCATTCTTCCTGAAGCTTCCTTCATCGTCTCGTGATGAGTTCGAGAACAACATCCAAAATAATGGCTTGGTTTGTGGGGGAGATGATGAGGAGGCAGAGATGCTTAACAGATTGTATGTCCAAGGGGGAGAAAATGGATCGGTGAAGTTCATGCTGTGGTTTGCAAGCGCCTTGGGAGGAGTTGAACTGGTGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAATAATAAGACGTTACCATCAGGTGCTGAGGGACAAGGGTATGTTCTTGCAGCAGCTGCGGGGTTCAGAAGATTCAGTTACTCTGAGCTGAAACAAGCCACCAAAGGTTTCAGTGAAGAGATAGGAAGGGGTGCTGGAGGTACTGTGTATAAGGGTGTCTTGGAAGATAATCAAGTCGTGGCAATAAAGCGTCTGCATGAAGTAGCAAACCAGGGAGAAAGCGAGTTTCTGGCTGAGGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATATGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTGGCTCAGAACCTTTCATCAGGTGTCCAAATCACAGAGTTAGAAGCAGAGTCACCTCATCATGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGATGAAAGGATCAGAAAATGGATCATCTTGGGTGGATCAAATCGTTGACCCTGCTTTGGGATCAAACTATTACATGAATGAAGTGGAGATATTGGCAACAGTGGCTTTGGAATGTGTGGAGGAAGAGAAAAATGCCAGGCCCAGCATGAGTCGAGTAGCAGAGAAGCTTCAGAGTCATATGCACACGATTGTTGATGTTTTCAACAAAGAATAG


Promoter Sequence:
>Vu_27122::LG7:24618751-24620751(+)
AAGTTATCTAAAGGTAAAGGTTCACTTCAAAAGATTCTAGAAGGAAAAAAGACGAGATGGATTCAAATATTGAAAATGGAAAAACAACATATAAAAATAAAACAAAATGATGGAATAAAAGATGAAAAGATAAAAAAGAACAGGGGAAGCAAGGTGGTCATGCCACTTAGGGTACTAAGCCAACCAAGTGTTAGAATCGTACAACTAAATATTTATTGGACACAAACCAAAAGAAATGATGAATTGGTTTAATGTTAAAAATAAAAACTTTAAATTTTTTTAAAAAATAGAGGCAATCAAAGAATTAAAATAAAGAATACGAGGATAAGAAAAAATTACACAATAATTACTAGTTAAGATCAAAAGATCTCATGTCTAGTTATTAATCAACTTAACTAGAATTACTATTCAAACACTATCAAATTGAATATTACAAACACTAATGTAACTAATAGTTTAAAATATGAAAAAAAAAATCACAAGAGATGAAGAAAACACATTTCTTGTAGCTATAAGAAATAAACACCAGTTATGAATACCACACCTCTTGAAAGAAAATACCTTTCTTGAAACCAAAAGAAATAACTCCCTTTAAATTATAAAAAGAAATATCACACCTATGTTGAATCACACAGCATATGAATAAGCTTACACAACCTAAAAATACTATTAAAAAATCCACTTACATAGTTAGTTATTACAAATACTTACTTTAAAATAAATAATTCATTTTAATCCTTGTCTATTCAACTTTAAATATGTTTAGTCTGTATGAAGTATCAAAATATTCTCTTAACTTTGAAAGTTTACACAGGTTTTGTTTACTTTTTTTTTATAATAAATATATTAAAAGAAGAGAATAACATTATAATATACTTTTCTGTTCCTGATGTGAATAGATAACTGAAGATTGCATGTTAAGTCGTGTTTTCTGCCTTAGCAATCAATGTATTCAGAAGGTTGACATTGAGCTACTCAATCACTTATTTAGTCTTCTTTGCAATTCCCTCAACTTTTCCATCTTCAATATTTTTCCAAAGTGATTACATTTTAAAGTGATAAAAGAATGGTCAAAAGTGGTTTACTTGTAAATAATTCTTGTTTAAGTATAAATTAATATATTTTTGGTAAAAAAAAGTTTTTAAATTAGAAGGGAGTTTCTCTAGTCTACTACAATTTTTATATGCATAATGAAAAATAAATATTTTAAATTTCTAATTGTCGCAACTATTATTCTTTTTTATTTTAATCATTTGGTCTATGGTTAATATTTGTTGTATAATCACAAAGGTGAGAGTCTTAGTAGGTTGGTTATGCTTAATGCAACTCCAAAAAAGTTTGTAAAAAGTTTTAAAACATGCATGAGATGAAATATTTATAGATGATATAACAAGATATTGATAACGATGGCATAAATTTTCGTAGAATTTATTAGGATAGGTTTTAGAAGAAATTTTAGAATGGTCTTGTATTTCAGTTATTTATGCCAATAGTCATCACTACAGTAATCTACAGTGATTGTTTTATGAAAAAGGTTGGAAAGTGAAGAAGTGTTGATTTAAAATTTTGCTTGTTGAAATTATATATTTTGACCAAAGCATAGTTCCATATGTTTTTGAACTTTCATCCTTACTTTCATGCACCTCAACTGTTCACATCATATGCGTTTACTTCTCATTTCTCTTTTCTATAAGTAAACCATCAAACTCATATTTTAATCAACACTTTCTTCTCCAAATCTTTCAACATTATCTTCCAACACATATTCAATCAGTCTTCAAGAAAACCACTGCACTTAATAGTCTTTTTCATTGGTTTCTTGCCTTCCAAAAATCAACCAACTTTGTTTATCATTAACATCTTTGACTCTTCATTTTCATGAGTAACAGATGATGAAAGTACTCAGAAAAACAGGAGGAGATGAAAATGTTGGCTTCTTTGACTCTTTCGTTTTAAATAATGACACCAACTTCATCATTAGCACACAGTACCATGCAAAA


Gene Sequence:
>Vu_27122(+)
ATGGCACCTTCAACACTGTCTTTCGCTCTTCTCCTTTCTCTCATATTCTTCCATAATTTCCATGCTTCGTCTTCTTTATCTCTTTCCGTCGAGAACTTCAAAGAAGATGTCATAGTGTCATCACCTCAAAAAACATTCACAGCGGGCTTTTACGCCGTCGGACAAAACGCTTTCTGCTTCGCAATATGGTACACGCGCTCCCCGGACACCGTCGTTTGGATGGCCAACCGGGACCGTCCAGTAAACGGAAAACGCTCCACGCTATCCCTTCTCACGACCGGTAACCTCGAACTCACCGACGCTGGCCAGTTCCAAGTGTGGTCCACCAACACCGCCGCCGAATCCAACCGAGTCCAGTTGCGTTTGTACGACAACGGGAACCTCGTACTCCTCGAAAGCCAGAACAGTTCCTCCGAGGTTGTGATATGGCAGAGCTTTGATTTCCCAACCGACACGCTTCTTCCTGGTCAACCTCTGACTAAGAGTGGCAGCTTGGTTTCCTCGAGAAGCGGGAGTAACTACTCCTCCGGTTTCTACAGGCTCTTCTTCGACTCTGAGAATGTTCTTCGCATCATGTACCAGGGTCCTCAAGTTTCCAGCGTTTATTGGCCGGACCCTTGGCTTCAGAACAACAACTTCGGGAACGGTGGCGCCGGAAATGGCAGATCCACTTACAACGATAGCAGGGTCGCTGTGCTTGATGATTTGGGGCACCTGGTTTCTTCCGATAACTTCACTTTCAGAAGCATTGATTACGGCACGGTGCTGCAACGGAGGTTGACCCTCGATCACGACGGTAGTGCGAGGCTGTACAGCAAGAAGGATGGGGAAGAGAAGTGGACAATGGCGGGGGAATTTCGCTCACATCCGTGCTACGCTCATGGGATTTGTGGGGCTAACAGTTATTGCAGATACGACCCTCCCAGTGGTAGAAAGTGTTCGTGCCTCCCAGGTATGAGAAGGAAACATGTGAAACTTTTCCAAAACAAGATTTCAGTTTTCGAAAATGACATATTATGTTCTTTTTTCATGAGTGTTTGATGAAATGAATTGTGTGAATAGGTCATTCTTGGGTTGATAGCAAAGACTGGTCTCAAGGTTGTGAACCAACTTTCGAGCATTTGTGCAGCGGCAACAACAGAACCGAGAACGAGTCTCGCTTCTTGCGCATACCTGATGTTGATTTCTACGGATACGACTATGGCTACTTTGGAAATTACACCTATCAACAGTGTGAGAATCTCTGCGCGGAGAAGTGCGAATGCAGAGGGTTTCAACACAGCTTTTCCGTGGAAAATGCTTTTTTTCAGTGCTACCCAAAGACGCATTTGCGTAATGGGAATAGTCAACCGGGTTTCACGGGATCATTCTTCCTGAAGCTTCCTTCATCGTCTCGTGATGAGTTCGAGAACAACATCCAAAATAATGGCTTGGTTTGTGGGGGAGATGATGAGGAGGCAGAGATGCTTAACAGATTGTATGTCCAAGGGGGAGAAAATGGATCGGTGAAGTTCATGCTGTGGTTTGCAAGCGCCTTGGGAGGAGTTGAACTGGTGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAATAATAAGACGTTACCATCAGGTGCTGAGGGACAAGGGTATGTTCTTGCAGCAGCTGCGGGGTTCAGAAGATTCAGTTACTCTGAGCTGAAACAAGCCACCAAAGGTTTCAGTGAAGAGATAGGAAGGGGTGCTGGAGGTACTGTGTATAAGGGTGTCTTGGAAGATAATCAAGTCGTGGCAATAAAGCGTCTGCATGAAGTAGCAAACCAGGGAGAAAGCGAGTTTCTGGCTGAGGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATATGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTGGCTCAGAACCTTTCATCAGGTTCAAATGTACTTGGCTGGAGCAAAAGGTATAACATTGCTCTGGGAACAGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATCAAGCCCCAAAATATACTTCTTGACTCTGATTATAAACCAAAAGTAGGAGATTTTGGCTTGTCTAAGCTACTTAACAGGAACAACCTCAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTCTACAGCTATGGCATTGTTGTATTGGAGATGATCACTGGAAGGAGCCCAACAACAGGTGTCCAAATCACAGAGTTAGAAGCAGAGTCACCTCATCATGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGATGAAAGGATCAGAAAATGGATCATCTTGGGTGGATCAAATCGTTGACCCTGCTTTGGGATCAAACTATTACATGAATGAAGTGGAGATATTGGCAACAGTGGCTTTGGAATGTGTGGAGGAAGAGAAAAATGCCAGGCCCAGCATGAGTCGAGTAGCAGAGAAGCTTCAGAGTCATATGCACACGATTGTTGATGTTTTCAACAAAGAATAG