Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27121 LG7 24608424 24611417 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 24608522 missense_variant p.Ser616Asn
A/C 24608532 stop_lost p.Ter613Glyext*?
C/A 24608546 stop_lost p.Ter608Leuext*?
T/C 24608552 missense_variant p.Lys606Arg
C/T,* 24608557 synonymous_variant p.Gly604Gly
C/T 24608564 missense_variant p.Cys602Tyr
G/T 24608566 synonymous_variant p.Pro601Pro
G/A 24608567 missense_variant p.Pro601Leu
C/T 24608701 downstream_gene_variant
A/G 24609095 downstream_gene_variant
T/C 24609096 downstream_gene_variant
T/A 24609099 downstream_gene_variant
C/T 24609105 downstream_gene_variant
G/T 24609106 downstream_gene_variant
A/T 24609112 downstream_gene_variant
T/C 24609117 downstream_gene_variant
C/A 24609125 downstream_gene_variant
A/T 24609126 downstream_gene_variant
T/C 24609129 downstream_gene_variant
C/T 24609211 synonymous_variant p.Lys549Lys
T/C 24609258 missense_variant p.Ser534Gly
G/A 24609584 missense_variant p.Ala425Val
T/C 24609619 synonymous_variant p.Ser413Ser
G/C 24609638 missense_variant p.Thr407Arg
G/C 24609647 missense_variant p.Pro404Arg
C/A 24609729 stop_gained p.Glu377*
C/G 24609801 missense_variant p.Gly353Arg
G/A 24609818 missense_variant p.Ala347Val
A/C 24610084 downstream_gene_variant
C/T 24610146 downstream_gene_variant
C/G 24610198 downstream_gene_variant
G/T 24610395 downstream_gene_variant
A/C 24610466 downstream_gene_variant
C/A 24610467 downstream_gene_variant
G/A 24610533 synonymous_variant p.Asn295Asn
T/A 24610535 missense_variant p.Asn295Tyr
A/G 24610827 synonymous_variant p.Ser197Ser
C/G 24610899 synonymous_variant p.Ser173Ser
G/C 24610913 missense_variant p.Arg169Gly
G/C 24611006 missense_variant p.Pro138Ala
G/A 24611014 missense_variant p.Ser135Phe
T/G 24611057 missense_variant p.Asn121His
T/C 24611058 synonymous_variant p.Leu120Leu
C/T 24611062 missense_variant p.Arg119His
G/A 24611151 synonymous_variant p.Ser89Ser
C/A 24611178 synonymous_variant p.Pro80Pro
T/G 24611214 synonymous_variant p.Pro68Pro
C/G 24611288 missense_variant p.Ala44Pro
C/G 24611309 missense_variant p.Val37Leu
G/A 24611337 synonymous_variant p.Ser27Ser
C/A 24611342 missense_variant p.Val26Phe
A/C 24611360 missense_variant p.Phe20Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27121.1
MAASTLCLALLVPLIFFHSFHASSSVSLSVENFKEEVIVSSPKATFTAGFYAVGQNAFCFAVWYTHSPDTLVWIANRDQPVNGKRSTLSLLKTGNLVLTDAGQLQVWSTGTATSSRQVRLNLYDTGNLVLLEDSSDSPVLWQSFDFPTDTLLPNQPLRGSTNLVSSRSRSNHSSGFYRLFFDFENVLRLMYQGPRVSSVFWPYAWLQSNNFGNGNGRSTFNDSRIAVLDELGGVLSSDNYTYRTIDYGTVLQRRLTLDHDGNVRVYSMVDGQKKWVVSGLFRPQPCFIHGICGPNSYCTNNPTTGRKCSCLPVFIEKFMLSGHRWIDSQDWTLGCRPNFDPWCNTTKQESRFVGLSEFDFYGYDYGFYQNHTYEQCVNQCLKLCECKGFQFSFSDQGGFGSQCYLKTQLLNGHHSVSFSGSFFLRLPLSQDYENPISNVLVCGGNSGRVKELERPYVEEKENGSVRFMLWFACALGGLEVLCFFLVWCFLFRNNADKQAYVLAAETGFRKFSYSELKQASKGFGEEIGRGGGGTVYKGVLSDDRVVAIKRLHEVASQGETGIQLSELDAESHNHGRLVTWVREKRKKGSEVGSSWVDQIVDPALGSKYDRNEIEILATVALECVEEEKDVRPSMSHVVERLQSYEHNS*


CDS Sequence:
>Vu_27121.1
ATGGCAGCTTCAACACTGTGTTTGGCTCTTCTCGTTCCTCTCATCTTCTTCCATAGCTTTCATGCTTCATCTTCCGTCTCCCTCTCCGTAGAGAACTTCAAAGAAGAAGTCATAGTGTCATCACCCAAAGCAACATTCACGGCAGGCTTTTACGCCGTCGGACAAAACGCTTTCTGCTTCGCAGTATGGTACACCCACTCACCAGACACCCTTGTTTGGATCGCCAACCGGGACCAACCGGTTAACGGAAAACGCTCCACGCTCTCCCTTCTCAAAACCGGTAACCTCGTACTCACCGACGCCGGTCAGTTGCAAGTGTGGTCCACCGGCACCGCCACCTCATCCAGACAAGTCCGCTTAAATTTGTACGACACCGGCAACCTCGTACTCCTCGAAGATTCCTCCGACAGCCCTGTTTTGTGGCAGAGCTTCGATTTCCCGACCGACACACTTCTTCCAAACCAGCCTCTGAGAGGGAGCACCAACCTCGTTTCCTCGAGAAGCCGGAGCAACCACTCGTCCGGTTTCTACAGGCTCTTCTTCGACTTCGAGAATGTTCTGCGGCTCATGTACCAGGGCCCTCGAGTTTCTAGCGTTTTCTGGCCCTACGCTTGGCTTCAGAGCAACAACTTCGGTAATGGCAACGGCAGATCCACTTTCAACGATAGCAGGATTGCTGTGCTTGATGAGTTGGGTGGCGTGCTTTCTTCCGACAACTACACTTACAGAACGATCGATTACGGGACGGTGCTTCAGCGGAGATTGACCCTCGATCATGACGGTAATGTGAGGGTCTACAGCATGGTAGATGGACAAAAGAAGTGGGTGGTATCAGGGCTGTTTCGCCCACAACCTTGTTTTATCCATGGCATTTGTGGACCCAACAGTTACTGCACAAATAACCCAACAACTGGCAGAAAGTGTTCCTGCCTTCCAGTGTTCATTGAGAAATTTATGCTATCAGGTCACAGATGGATTGATAGTCAAGACTGGACTCTAGGTTGCAGACCGAATTTTGATCCTTGGTGCAACACCACTAAGCAAGAGTCTCGTTTCGTGGGCTTATCTGAATTTGATTTTTATGGATATGATTACGGCTTCTATCAGAATCACACTTACGAACAATGTGTGAATCAGTGCTTGAAGTTGTGCGAATGCAAAGGGTTTCAGTTCAGTTTTTCGGACCAAGGTGGTTTCGGTAGTCAGTGCTACCTGAAGACACAGTTGCTGAATGGGCATCATTCAGTAAGTTTCTCGGGATCATTCTTCCTGAGGCTGCCTTTGTCTCAGGACTATGAGAACCCCATCAGTAATGTATTGGTTTGCGGGGGAAATAGCGGAAGAGTGAAAGAACTAGAAAGACCGTATGTGGAAGAAAAAGAAAATGGATCGGTGAGGTTCATGCTGTGGTTTGCGTGTGCCTTGGGAGGACTTGAGGTTCTGTGCTTCTTTCTGGTGTGGTGTTTTCTGTTTAGGAATAATGCTGACAAACAAGCCTATGTTCTTGCTGCGGAAACAGGGTTTAGGAAATTCAGTTACTCTGAATTGAAACAAGCTTCCAAAGGTTTCGGTGAAGAGATTGGAAGGGGTGGTGGAGGTACAGTGTATAAAGGTGTCTTGTCTGATGATCGGGTTGTGGCGATAAAAAGACTACATGAAGTAGCAAGCCAAGGAGAAACAGGTATCCAACTCTCAGAATTGGACGCTGAATCACATAATCATGGGAGGTTAGTGACATGGGTGAGGGAGAAAAGGAAGAAAGGGTCAGAAGTGGGATCATCTTGGGTGGATCAAATAGTTGACCCTGCTTTGGGATCAAAGTATGATAGGAATGAAATTGAGATATTAGCTACGGTGGCTTTGGAATGTGTAGAGGAAGAGAAAGATGTGAGACCCAGCATGAGTCATGTTGTTGAGAGGCTCCAAAGTTACGAGCACAATTCTTGA


Promoter Sequence:
>Vu_27121::LG7:24611417-24613417(-)
TAGAGAGTTGTTCACGGCTGTTGGACGATATGCTAATGAACAAATGTTTTTGTCTATTACATATGTCGTGGTTGAAGTAGAGAACAAGGATTCATGAACCTGGTTTCTGGAACTACTGATTGATGACCTTGGTGAGAGTGAATGAGATTAGGGTTTTGCTTCCGCCATCCATTATATGTGAAAGACGAACATGAATGGTTCATCTTCAAATCTATATTACTTTAACCATAACACTGAAAAAGAATGAACAACTAATCAACCAAAAACCACCAAGAACATCGAATAACTACATCAACGAAGATCAACACTTTCTTAGCAAACAAACAACCTAACAACCAATATCAAATGCCATTTTATTAGGAATTGAATAACAACAAACACCTTGGAACAAGTACAACGAAAAACATCTACAATCCCTTTTTATTATGAATTGAAGCTATTAGGGATTCAAAATTATAAATCGTGCGAAGTTTTTCTAATTATTTTATTTCAAAACAACTTAAATCCACGAAACTCACAAAATAAGTGAGTCACATGATTTAAAACACCAACATCAACATATCAAGTTAACATTTGTCTAACACCGTTAGTTTAATTTATCGACAGGATCTAATTAAAATAATTTTATAAAAATAAAAATCCAATTAAGACGAAAAATAAAATTAAGGAACCAAATTGAAATTTTGGGAATGATTAAACCTTATATTACTATTGTTTTTAAAGTTCGAATATTAAATTTGTTAGAATTAAAGTAAAAAATAAACTTAAATTTTATGTAAAATTTTATAAACTAATTGTTTCGGTTTAATTGGGGTCCGAGGTTGTCCGTCTCCTAGCCTCTTCTGCCTTCAGATGTGCCCTTTACTATGCCAGTCCGTTCGTCCAGTGTTTAAGTTGTCCTCCCAGCCAGGGGTGGTCCTGCAGAAAATACTCGGACGCTCAAGTCAGAAAAAACTGCCCTTTCTATATTCTGATAGTAATTTGGATTAAAATCATCTTACTTGAACATTAATATTGTATTTATCGGCCTCATAATTGTCCAGCCCATTAATTATATTAATCATTCATTAATACAATATATTTGTGCAATATAATCTGCCAATCACCCATAAATGCCATATATTTGTCCTTAATATGGTCATTAAATATATTAACTAGCCATTAATAACATCCATGTTACCTGACTCGCGATCACTGAATTATCAGTCGGTGCGAAAGACACTCTCCTCAAACGGTCGGTTACGCGGTTACCATACACTAATACATATTTAATATTTTTTTCTAGAACCAATTCTATTTTCTTTTTTGCCTCTCTATAGTGAAAAAGGGAGATACAACTATGGAAGAGGACAATGGCGGTGTTTTGCAAGGAACCAGAATATCTTAAGAACAACCACCTTTTCGGGATGGGTAGGTGTAGTTAGTCAGACATTCAAAACTTCTTTTCCACACCTATTGACTAATTCCTAGTTTTATTATTAAGTTTGTGCAGAGTGAAGCAATTGTGGACACATTTTTATATTTATTTAACATATAATATAAAAACAAAATAATCATTAAAAATATGAAAAAAATTATATTATTTTAACAAATATAAAATAAAAAAGATTTGGATCAAATAAATATAAAAATTTTATATGTGTGAATGTATTATTTTTCTTTTCAATATTTCTAAACTATTACACCAGTTTATTTTAACATACAAAGTAAATTTCAAAGAAAGATTATCCAAAAAAATAAATATAAATTTCCTTAATTTATTTATTTTGCATTAAGCTTTTATATATACGCACAGATAGAATGAATATATCGAAGACAAGACGACATTATCTTTCATGGATCAGCTTCACGTTGAGGCATAATTCATAGCCCAAGCAACTTGCATATGTTGTCATTTTCGATTTGATTCTTTCTCTGTTTTTATTTATTATTCAACCGCTAGAACCCCACCAGGAAGACATAAAACAGCAAGGCATAGCATAGCATGAGAAAATTCATCA


Gene Sequence:
>Vu_27121(-)
ATGGCAGCTTCAACACTGTGTTTGGCTCTTCTCGTTCCTCTCATCTTCTTCCATAGCTTTCATGCTTCATCTTCCGTCTCCCTCTCCGTAGAGAACTTCAAAGAAGAAGTCATAGTGTCATCACCCAAAGCAACATTCACGGCAGGCTTTTACGCCGTCGGACAAAACGCTTTCTGCTTCGCAGTATGGTACACCCACTCACCAGACACCCTTGTTTGGATCGCCAACCGGGACCAACCGGTTAACGGAAAACGCTCCACGCTCTCCCTTCTCAAAACCGGTAACCTCGTACTCACCGACGCCGGTCAGTTGCAAGTGTGGTCCACCGGCACCGCCACCTCATCCAGACAAGTCCGCTTAAATTTGTACGACACCGGCAACCTCGTACTCCTCGAAGATTCCTCCGACAGCCCTGTTTTGTGGCAGAGCTTCGATTTCCCGACCGACACACTTCTTCCAAACCAGCCTCTGAGAGGGAGCACCAACCTCGTTTCCTCGAGAAGCCGGAGCAACCACTCGTCCGGTTTCTACAGGCTCTTCTTCGACTTCGAGAATGTTCTGCGGCTCATGTACCAGGGCCCTCGAGTTTCTAGCGTTTTCTGGCCCTACGCTTGGCTTCAGAGCAACAACTTCGGTAATGGCAACGGCAGATCCACTTTCAACGATAGCAGGATTGCTGTGCTTGATGAGTTGGGTGGCGTGCTTTCTTCCGACAACTACACTTACAGAACGATCGATTACGGGACGGTGCTTCAGCGGAGATTGACCCTCGATCATGACGGTAATGTGAGGGTCTACAGCATGGTAGATGGACAAAAGAAGTGGGTGGTATCAGGGCTGTTTCGCCCACAACCTTGTTTTATCCATGGCATTTGTGGACCCAACAGTTACTGCACAAATAACCCAACAACTGGCAGAAAGTGTTCCTGCCTTCCAGGTATTTCAGGAAAGTGGTAGAGGAAACTTTTTGGATAAAGTTCTTATTAAAAGTGGTAAATAAGAAGTTAAAACGCACTGAGTTTCTCCATGAACTAAAAGTCGACTTTGCTGTCTCAGTTTTTGAAGAAGTTAAAAGAAAAGAACTTTCGTCAAAATTGCAGTATGTATGATTATTTTAGCTCAGTAAAGAAGTTCAGTTAAGATTTTCTGATTTTCTTCTGTGATAAGTACTTATGGAGAAAGTATTCAAACTTATGCCAAGTACTTCATTTTTTTTATAGAGGTTCTTTCCTTTAACTTTTCCTAAAAACTGGTTTTTTTCTTGTACATAAGATGGTTTTTATTTGACTTTCTTCTGCGTAGGTAAACTCATCAGTTAGTTCTTATGTGAAAATAAAGTAATGTTAAAATAAATTAAGCTTTTCCCATGCATATTCTAAATCAAATTTTGCTATAAAAGTTTATTTGAAGTTACAAGATAAGTTTATTTAATTCATTTTACTTCATGTGTTCCCCCCTTATAATTGTTTATACATATGGTTGTCTCCTCCTGTAGTGTTCATTGAGAAATTTATGCTATCAGGTCACAGATGGATTGATAGTCAAGACTGGACTCTAGGTTGCAGACCGAATTTTGATCCTTGGTGCAACACCACTAAGCAAGAGTCTCGTTTCGTGGGCTTATCTGAATTTGATTTTTATGGATATGATTACGGCTTCTATCAGAATCACACTTACGAACAATGTGTGAATCAGTGCTTGAAGTTGTGCGAATGCAAAGGGTTTCAGTTCAGTTTTTCGGACCAAGGTGGTTTCGGTAGTCAGTGCTACCTGAAGACACAGTTGCTGAATGGGCATCATTCAGTAAGTTTCTCGGGATCATTCTTCCTGAGGCTGCCTTTGTCTCAGGACTATGAGAACCCCATCAGTAATGTATTGGTTTGCGGGGGAAATAGCGGAAGAGTGAAAGAACTAGAAAGACCGTATGTGGAAGAAAAAGAAAATGGATCGGTGAGGTTCATGCTGTGGTTTGCGTGTGCCTTGGGAGGACTTGAGGTTCTGTGCTTCTTTCTGGTGTGGTGTTTTCTGTTTAGGAATAATGCTGACAAACAAGCCTATGTTCTTGCTGCGGAAACAGGGTTTAGGAAATTCAGTTACTCTGAATTGAAACAAGCTTCCAAAGGTTTCGGTGAAGAGATTGGAAGGGGTGGTGGAGGTACAGTGTATAAAGGTGTCTTGTCTGATGATCGGGTTGTGGCGATAAAAAGACTACATGAAGTAGCAAGCCAAGGAGAAAGTGAGTTCCTGGCTGAAGTAAGTATCATTGGAAGACTTAACCACATGAACTTAATTGGCATGTTAGGGTTTTGTGCGGAGGGAAAATATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTGAGAACCTTTCATCGAGTTTAAATGTTCTTGATTGGACCAAGAGGTATAACATTGCTTTGGGAACTGCAAGGGGTCTTGCTTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATCAAGCCCCAAAATATACTTCTCGACTCTGATTACCAACCTAAGGTAGCTGATTTTGGGTTGTCTAAGCTACTTAACCGGAACAACCTCGACAATTCAACCTTCTCGAGAATAAGAGGAACAAGAGGCTACATGGCACCGGAGTGGCTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTCTACAGCTATGGCGTTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCAACAGCAGGTATCCAACTCTCAGAATTGGACGCTGAATCACATAATCATGGGAGGTTAGTGACATGGGTGAGGGAGAAAAGGAAGAAAGGGTCAGAAGTGGGATCATCTTGGGTGGATCAAATAGTTGACCCTGCTTTGGGATCAAAGTATGATAGGAATGAAATTGAGATATTAGCTACGGTGGCTTTGGAATGTGTAGAGGAAGAGAAAGATGTGAGACCCAGCATGAGTCATGTTGTTGAGAGGCTCCAAAGTTACGAGCACAATTCTTGA