Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27115 LG7 24579066 24580354 PREDICTED: probable WRKY transcription factor 62
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 24579180 missense_variant p.Ala39Ser
C/A 24579376 intron_variant
C/T 24579440 intron_variant
C/A 24579708 synonymous_variant p.Ile94Ile
C/T 24580050 missense_variant p.Leu182Phe
G/T 24580109 missense_variant p.Lys201Asn
C/A,* 24580129 missense_variant p.Pro208His
C/A,* 24580132 missense_variant p.Pro209His
C/A 24580135 missense_variant p.Pro210His
A/T 24580187 stop_lost p.Ter227Tyrext*?
C/T 24580240 missense_variant p.Thr245Ile
C/T 24580270 missense_variant p.Ser255Leu
A/C 24580275 missense_variant p.Thr257Pro
A/T 24580337 stop_lost p.Ter277Tyrext*?
G/C 24580345 missense_variant p.Arg280Pro
T/A 24580348 missense_variant p.Met281Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27115.1
MDQRKVLEELLRGYESATKLRVVMNEKDESEIRTLQCLAKNVLRSFTNTLFLLNSHHHHLSHLLSPTKSQDSQESSKTFTSFNNRRGCYKRKRHPQEWEKISEAPPIDGHQWRKYGQKEILKAKYSRNYYRCTHKYDQNCQATKQVQRIQENPPLYKTTYLGHHTCNDLLSSEIILDSNDSPSDTSILISFNNSFPPTKQEGPFLSSSSSSSSSSINPSPSLITEEIIPSCYDYMLPPEPTFDDYSMHNNVTPPLDHWDDMSSALCDSDIEEIKRLLMDSDD*


CDS Sequence:
>Vu_27115.1
ATGGATCAAAGAAAGGTGTTGGAGGAGCTTCTGAGAGGTTATGAATCTGCTACTAAACTTCGAGTAGTGATGAATGAAAAAGATGAGTCAGAAATAAGAACCCTTCAATGTCTTGCCAAGAACGTGCTTAGATCCTTCACCAACACCCTCTTCCTCTTGAACTCTCATCACCATCATCTCTCTCATCTTCTCTCTCCCACCAAATCTCAGGACTCCCAAGAAAGTTCCAAGACTTTCACCAGTTTCAATAACAGAAGAGGCTGCTACAAGAGAAAAAGACATCCACAAGAATGGGAGAAGATTTCAGAAGCTCCACCAATTGATGGCCATCAGTGGAGAAAGTATGGCCAAAAAGAGATCCTCAAAGCCAAATACTCAAGGAACTATTACAGGTGCACTCACAAGTATGATCAGAATTGTCAAGCAACAAAACAAGTGCAAAGAATTCAAGAGAATCCTCCCTTGTACAAGACCACATATTTAGGCCACCACACATGCAATGACTTGCTAAGTTCTGAAATCATACTTGATTCCAATGATTCTCCTTCTGACACTTCCATACTGATAAGTTTTAACAACAGCTTCCCTCCAACCAAGCAAGAAGGTCCCTTTTTATCATCCTCCTCCTCCTCATCATCATCATCTATCAATCCCTCACCATCACTGATCACAGAGGAGATAATTCCATCATGTTATGATTACATGCTACCCCCAGAACCCACTTTCGATGATTACTCAATGCACAATAATGTCACTCCACCACTCGATCACTGGGATGATATGTCTTCTGCCTTGTGTGATTCTGACATTGAAGAAATCAAACGTTTGTTAATGGATTCGGATGATTGA


Promoter Sequence:
>Vu_27115::LG7:24577066-24579066(+)
GTTTGTTTGGTTTGAGTTTGTGTTATTAGAAACTTAGAATTTGATCAATTGAGTCAATTGGTACGTGCCCCTAACATTAAAATTTGTTTTTGACTCAAATACTAAGAAGGAAATACCAATTTGACCATTTGAACAGGTCCCATTTTTCAAAATCACAAAATGTTCATCTATTGATATTTGATATAACGTTGAGAGGTGGCAAGCTTGCACTGAACACTAGTATATTGTGCAAGTTTTGAAGCATTTTAGCTCTAGACTGTTGAATGTCAGTCTTGTACTGTTGAGCACAAAAAAATACAAATACTTTAACATTGAGTGATACCAGGGCATCGTTAAGCGTCATTGTCCACTACAGGTCTAGAGTAATTTTAGTTCTAGAATGATAAGTGACAGAAGGGTGTTGTTGAGTGCGATATTTTGCAAGAAGAATGACGTTAAGCATCAAGACTGTCGTCAAACTCCACCTTTTTGCAAAAGGTTTGTTGATAGTTAGGATTGTTACTTTGCGAAATATTTTGCCCTAAGCTCCACTTCTAAGCGACAATGTATATGTTAAAATTTTCTTATATGCTTTAACTTGTTTGAGACAGAATTACCATGGTTTTTGTGTATGTTTAAGATCTATTATGATATTTTTTTGGATTGATAATAGTGTTGTGAACATGTGTGATAAATTTGTTAGAAGAAATTTCAAGGAGAAGTTCTTGTAATGATTTCAGTAGTGTATGTATTGAAATATGAATTCTGTGTTGTGAGTTATTATGTCTCCAATAACCATCCAATCTCAAGTAGAGAAGGATGAAGTATGTGGTGAGAGGAGCAAGAAGCCCTAGTATAGGGGCTTTACTTTGTCCAAAGATCTTAAGAGACTAACGTTGTGTGTGGTACGATGAGATTCATTGGCAATAGCTCTACAGAGTAGTAGAGATCACCACAAGTGCATAACTTTCCAAAATCTGATATCAAAACATGTATCTAAATGGTTAAGTTTAGTATGAATAATTGTAGGTGTTGGGATTGTTGATATGAATTATTTACTTTTGTTAATATCTCTATATGTGTCATATGATTGTTCTTTTTGTACATTAGCTTCTTTCTTTTTGTGTTTGTTTGCCTTATCACCCTAATGATGTGAATAAATGAGAAAGTAATCCAATACCGGACCAATGCCACAACTATGTAGGATAAGAATGATCCATGTTTATGTTTGTTTTAAAAAAATATTATTTTTTTATTTAATAATATGTTTCAACTGTATAATATAATATATATATATATATATATATATATATATATATATATATTATCTGTTTCTAAATATTATTAAAATAAGATGTTACACTGAATTACAAAGTTTAATTATATACACTAAAAAAATTATCGAGAAACAAATAATAATTGTTTTTAAGTTTAATATAAACAAGTTTGCATTCAACTAAAAACAAAAAGTATGCTTCCTCTACTCATGAACAAAGTTGCCACTTATAGTTGTTACAATTTATTACATCAGTCAACATTGACACCATAAGTATAAAGCACAAAACTAAAATATATACAAACAGTACATCAAAATACTTTTTTTTCCTCAGTTTTATTTCTAAGTGGGGTCACATTCTCAAATTTAAAAAAGTTCATGGATCTTGCAGAATTAAAAAAAATGTTTAACTAACACGATCTTGTCATTTTAGAAAGGAAATCCTGACAATTTTTTAAGTTCGTAAATTTCTAAACCCTAAAATAATATGAAAAGGCCAATCACCGGTGCATCCGGTAATGTACCTTGTACAGTGGTGGACCAAACACAAGTGTTTTACAACGTCAAACCAACCAATAATATATATACATGCATAAACAAACATGTACCTATCTAAACAAAATAAAATAAAAAAAAACAAAAGCTACCAACTTTCTTGTATATATATGAATGTAAGAGGCAAGAAGAAGATTTGGAGAAAAGCAATTAAGATAGTTTAAGAGAAGAAGAAGGAAGAAGAAGAAGA


Gene Sequence:
>Vu_27115(+)
ATGGATCAAAGAAAGGTGTTGGAGGAGCTTCTGAGAGGTTATGAATCTGCTACTAAACTTCGAGTAGTGATGAATGAAAAAGATGAGTCAGAAATAAGAACCCTTCAATGTCTTGCCAAGAACGTGCTTAGATCCTTCACCAACACCCTCTTCCTCTTGAACTCTCATCACCATCATCTCTCTCATCTTCTCTCTCCCACCAAATCTCAGGACTCCCAAGAAAGTTCCAAGACTTTCACCAGTTTCAATAACAGAAGAGGCTGCTACAAGAGAAAGTAATCATTTCTTCTTTTTCTGCAATGCTTCTCTTCCTTTTTAGTGACACAGAATTGATTCTTAGACTCGGTTTGTGTGCATGAGCTAGGTTTGAATTTCACTTTGTTAATTTGAGTTTCAACATTTTTGGATCTCCAAGATAACATATAACTGTCCCTTTGGAACCTAAATATGGTCATTGTTCTTCTGTCTAAGGTGGTTGTTTGATGGTCCCCATCAAATTGTTTAGCATTACTATTCTGATACTATATAAGGTTGTTTTTGTCTTTGATTGTTTGTAGTTTTTACCCTTTTGGTTTTGCTAGCTTATTGTCAAGTTTTAGTGTAAATTAATCAGCATTAATTTGTTGTCTATGCAGAAGACATCCACAAGAATGGGAGAAGATTTCAGAAGCTCCACCAATTGATGGCCATCAGTGGAGAAAGTATGGCCAAAAAGAGATCCTCAAAGCCAAATACTCAAGGTAGGTATAGCAAACTTATAATTTCATTCACCTAAATTGCATCTTTTTCCTTAACTAATAATGTGTTGTAACCTGTGCAGGAACTATTACAGGTGCACTCACAAGTATGATCAGAATTGTCAAGCAACAAAACAAGTGCAAAGAATTCAAGAGAATCCTCCCTTGTACAAGACCACATATTTAGGCCACCACACATGCAATGACTTGCTAAGTTCTGAAATCATACTTGATTCCAATGATTCTCCTTCTGACACTTCCATACTGATAAGTTTTAACAACAGCTTCCCTCCAACCAAGCAAGAAGGTCCCTTTTTATCATCCTCCTCCTCCTCATCATCATCATCTATCAATCCCTCACCATCACTGATCACAGAGGAGATAATTCCATCATGTTATGATTACATGCTACCCCCAGAACCCACTTTCGATGATTACTCAATGCACAATAATGTCACTCCACCACTCGATCACTGGGATGATATGTCTTCTGCCTTGTGTGATTCTGACATTGAAGAAATCAAACGTTTGTTAATGGATTCGGATGATTGA