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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_27058 LG7 23669488 23671998 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 23670106 synonymous_variant p.Leu207Leu
G/T 23671983 missense_variant p.Gly659Trp

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_27058.1
MKKNPWFCITLLTLFFSLFTHNSLAALTTVSANQTLTGDQTLVSEGEIFELGFFKPGNSSNYYIGIWYKKVTKQTIVWVANRDNPVSDKNTATLTISAGNLVLLDGSSKQVWSTNMSSSSRSGSVLIAILLDSGNLVLRDRHNGASASEPLWQSFDHPTDTWLPGGKIKLDNKTKQPQYLTSWKNNEDPATGLFSLELDPKGTTSYLILWNKSEHYWDSGPWNGHIFSLVPEMRANFLYNFTFVSNDNESYFTYSMYNSSIISRFVMDVSGQIKQLSWLETAQQWNLFWSQPRQQCEVYAFCGAFARCTENSMPYCNCLPGFEPKSLSDWNLEDHSGGCERRTKLQCENLNPSKGDKDRFLAILNMALPKHAQSVGSGKAGECESTCLNNCSCTAYAYNSRGCFIWIGNLLNLQQLSLDDSSGETLYLKLAASEFHDDKSSKGTVIGVAVGLVVGIGVLLAILLFFVIRRRKRMVGIGKPVEGTLVAFGYRDLQNATRNFSEKLGGGGFGSVFKGTLGDSSVVAVKKLEKDGQFTFFPTFAANVVVQGGPVVSLLDPVLEGNAEIEEVTRTIKVASWCVQDNEAHRPSMAQVVQILEGILEVNMPPIPRSLQVFVDNQENLVFYTDSNSTHSSQEKSNVSTTSSSQARSNISLASSKSAGGEN*


CDS Sequence:
>Vu_27058.1
ATGAAGAAGAATCCATGGTTCTGCATCACACTTCTCACCCTATTCTTCTCTTTGTTCACCCACAATTCCCTTGCGGCTCTCACAACCGTATCCGCAAACCAAACTCTCACCGGAGACCAAACCCTCGTCTCTGAAGGTGAAATCTTCGAACTGGGTTTCTTCAAGCCGGGTAATTCTTCTAACTACTACATAGGCATATGGTACAAAAAGGTCACCAAACAAACAATAGTGTGGGTAGCAAATAGAGACAACCCTGTCTCTGATAAGAACACTGCCACGTTAACAATATCAGCTGGCAATCTAGTTCTCTTGGATGGATCTTCTAAACAAGTTTGGTCAACAAACATGAGTTCTTCTTCCAGGTCTGGTTCGGTTTTAATAGCTATTCTCCTTGATTCTGGCAACCTTGTGTTAAGAGATAGGCATAATGGTGCTTCTGCTTCAGAACCTCTGTGGCAGAGTTTTGATCATCCAACCGACACGTGGCTCCCGGGTGGCAAAATCAAACTGGACAATAAAACAAAGCAACCTCAATACCTCACTTCATGGAAGAACAACGAAGATCCTGCGACGGGTCTTTTTTCTCTGGAACTAGACCCCAAAGGAACCACTTCTTATTTGATTCTTTGGAACAAGTCTGAACATTACTGGGATAGTGGTCCTTGGAATGGGCACATTTTTAGTTTAGTTCCCGAGATGAGGGCGAACTTTCTCTACAATTTCACGTTTGTGTCGAACGACAACGAGAGTTATTTCACATACTCCATGTATAACTCTTCAATTATATCTCGGTTTGTGATGGATGTCTCCGGGCAGATCAAGCAACTCTCGTGGTTGGAGACTGCTCAGCAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGAGGTATATGCGTTTTGTGGTGCGTTTGCGAGATGCACTGAGAACTCCATGCCGTATTGTAATTGCTTGCCGGGTTTTGAGCCAAAGTCACTGTCTGATTGGAATCTGGAGGATCATTCAGGTGGGTGTGAAAGGAGAACCAAGTTGCAGTGTGAGAATTTGAATCCCTCTAAAGGGGATAAGGATAGGTTTCTTGCGATTCTCAACATGGCGTTACCTAAACATGCACAATCTGTGGGATCAGGGAAGGCAGGGGAATGTGAATCAACTTGCTTAAACAACTGTTCCTGCACGGCTTATGCATATAACAGTAGGGGGTGTTTCATTTGGATTGGAAACCTTTTGAATCTGCAGCAGCTATCTTTAGATGATAGTAGCGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTCATGATGATAAAAGCAGCAAGGGAACTGTTATTGGTGTGGCCGTGGGATTGGTTGTTGGCATTGGGGTTCTCTTGGCCATTCTTTTGTTTTTCGTGATCAGGCGAAGGAAGAGAATGGTTGGAATAGGAAAGCCTGTGGAGGGTACGTTGGTGGCATTTGGGTACAGAGATTTGCAAAATGCAACGAGGAATTTCTCTGAGAAATTGGGAGGAGGAGGCTTTGGTTCTGTTTTCAAAGGAACTTTGGGGGATTCAAGTGTCGTGGCAGTGAAAAAGTTGGAGAAAGATGGCCAATTTACCTTCTTTCCAACCTTTGCGGCAAATGTTGTTGTCCAAGGTGGCCCTGTTGTTAGCCTTTTGGACCCTGTTTTGGAGGGCAATGCTGAGATTGAGGAGGTGACTCGAACAATAAAAGTTGCTTCGTGGTGTGTCCAAGACAATGAGGCTCACCGGCCAAGCATGGCTCAGGTGGTTCAAATCCTTGAGGGGATCTTAGAGGTGAATATGCCTCCAATTCCAAGATCCCTTCAAGTGTTTGTTGACAACCAGGAGAATTTAGTCTTCTACACCGACTCAAACTCCACACACAGTTCACAGGAGAAGAGCAACGTTTCTACGACCTCCTCCTCTCAAGCCAGAAGTAACATCTCTTTAGCAAGCTCCAAGTCCGCGGGAGGAGAAAATTAG


Promoter Sequence:
>Vu_27058::LG7:23667488-23669488(+)
TGTGTAACATATATAACTCTGAGCTTGAGTCCACTCAATATCTATTTTCTAACTGAAACTAGTCCATCACTAACTAACAATGCTGATGAACATGAGACATGAGTCCAAAGGAGGGCAATGTGGCAGAGAAGAAACTAGTTTGGATGACAGATTACACATTTTTTTTTGCAGAAGCTTATCTCATGGCATTCATGTTGGTCGAAGATGGAGGTGATCCCAATACTTACAAGGAAGCTTCTCAAATTGTAAAATGGAGAGAAGTTATGAATGTAGAGATTCAAACAATTGAGAGAAATAAAACATGAGAACTCACTCATGCATGAAAAGGAATCAAACCTATTGAAGTCAAATGGATTTTTAAAACAAAATTCAATGAACATGAGGATATTGAGAATCACAGGGCTTTGGTGGCAAAAGGATACTCAAGACAATATGACATGAATATTGAGAAACACAAATCATTAAATGTCATTTTTAATATCAATAAAAATTAACATACATAAATAATAATTTAATTAAATTTTATTCTCAAACATAAAGTTATATTATTAGTTTAATAAAAGAATATTAGTACTATTTTTTTTAAAGTCTTTATTTTCTTAAATATAATTTTATAATTAATTAATTTAATAAAAATATATTAGTACTATTTTTTATTAAAGATACTTAGAAGTTTAAAACGAATGTTTTACATGTTTTTTCCTTATGTATGTGGATGAACTTGGAATAAAATACTATTATCTTAAAGTTTTTTAAAAATCCATTATCAATCATAAATCTATTAAAAACTAACTAATCAAAACACATGTTTCTTAAGTGATTCCCAACTATTAATACAAGAGAAGTTTCTCATTCAAAACTTTAAAAACTAAATTTTTCAATTTTTGTTATTTTTATGTTGCAAAACTTTTTAGTTTTAGAAAACAGCAGCTCATACTTACCATCTAAAAATACCCTATCACCAAATGGATACTTACATCGATATTTATTATTGTAGTGTCTAATATGAACGTGAAAGTCTACGAAAAAAGACCACTACTTTTTATGTCGCTTTAGCACGAGGACAGCAAAACACCCTCATCACCGTTACTCGATGGAGCTAAGGTAGGATCATGTCAACATCATGTACAAATTTACTTACCAGCCAGGATTCATTTTAGATTTTATTTTATGGTGAAAATCTTTTACTTGTTTTCCATCAATTATACGCATTAATTCACTCTTCTTTTCCCAACCACCTTCTCAACTTGATCACCAAGGTCTTAATCATCATTAAAACGAGAAAATGATGTATAACAATACTTCTTGTTGCTTTATCTTAGTTTGAGTGAATTAGCATCGCATAATATCTCTTGAGAAACTCAAGTTGATAAATTTAAACGTTGACTATATATAAAAGAAGAGTTTTAAATTATTACATTATAATTTTAAAGTGAAACTGACGTGAATATTTATATGAATTGAATTAATTCATATCTTATTGTTGTTTTGTCTTCAGACAAGATGATATTCAAGGTTGAACTTGAGTTGTTATTTCCTTTTATTAATGGTCTTGCTTTAAAGTTTAGTCTTGTTTGTTTAGATTAGTTATAAAATGATTGTTTTTGTAAGATTAAGCATTAGCCCGAAGAGAAATACCGCTTCACAATTAGATATTGAAAGCAAAGCGTCCTTATGGTTTTAGTATAAACAATCAGGAGATATTACATAGCACTCTGTAAAAATCAGAAATATTATTTGATTTTTTCAAATAATGCAAGGTTTCAATTCATTGTGGCTTGATGGATGATTATGAAATGAAGTTTACAACTCATGACAACGACGCATAACACATGTTTCGTTAGACTAGTCAGAACAAAATGCGCCGTTTCGCTTGATGAACACAACAGTCGCTTGTTGCTCCTTCATTAATGGTTTCTTTGTGTCTGTTCCACTGCATTGAAATCCAAGTACAATATCTCCTTTAATTTTTCACAGCAAGTTGCTAACGTAAAATACCA


Gene Sequence:
>Vu_27058(+)
ATGAAGAAGAATCCATGGTTCTGCATCACACTTCTCACCCTATTCTTCTCTTTGTTCACCCACAATTCCCTTGCGGCTCTCACAACCGTATCCGCAAACCAAACTCTCACCGGAGACCAAACCCTCGTCTCTGAAGGTGAAATCTTCGAACTGGGTTTCTTCAAGCCGGGTAATTCTTCTAACTACTACATAGGCATATGGTACAAAAAGGTCACCAAACAAACAATAGTGTGGGTAGCAAATAGAGACAACCCTGTCTCTGATAAGAACACTGCCACGTTAACAATATCAGCTGGCAATCTAGTTCTCTTGGATGGATCTTCTAAACAAGTTTGGTCAACAAACATGAGTTCTTCTTCCAGGTCTGGTTCGGTTTTAATAGCTATTCTCCTTGATTCTGGCAACCTTGTGTTAAGAGATAGGCATAATGGTGCTTCTGCTTCAGAACCTCTGTGGCAGAGTTTTGATCATCCAACCGACACGTGGCTCCCGGGTGGCAAAATCAAACTGGACAATAAAACAAAGCAACCTCAATACCTCACTTCATGGAAGAACAACGAAGATCCTGCGACGGGTCTTTTTTCTCTGGAACTAGACCCCAAAGGAACCACTTCTTATTTGATTCTTTGGAACAAGTCTGAACATTACTGGGATAGTGGTCCTTGGAATGGGCACATTTTTAGTTTAGTTCCCGAGATGAGGGCGAACTTTCTCTACAATTTCACGTTTGTGTCGAACGACAACGAGAGTTATTTCACATACTCCATGTATAACTCTTCAATTATATCTCGGTTTGTGATGGATGTCTCCGGGCAGATCAAGCAACTCTCGTGGTTGGAGACTGCTCAGCAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGAGGTATATGCGTTTTGTGGTGCGTTTGCGAGATGCACTGAGAACTCCATGCCGTATTGTAATTGCTTGCCGGGTTTTGAGCCAAAGTCACTGTCTGATTGGAATCTGGAGGATCATTCAGGTGGGTGTGAAAGGAGAACCAAGTTGCAGTGTGAGAATTTGAATCCCTCTAAAGGGGATAAGGATAGGTTTCTTGCGATTCTCAACATGGCGTTACCTAAACATGCACAATCTGTGGGATCAGGGAAGGCAGGGGAATGTGAATCAACTTGCTTAAACAACTGTTCCTGCACGGCTTATGCATATAACAGTAGGGGGTGTTTCATTTGGATTGGAAACCTTTTGAATCTGCAGCAGCTATCTTTAGATGATAGTAGCGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTCATGATGATAAAAGCAGCAAGGGAACTGTTATTGGTGTGGCCGTGGGATTGGTTGTTGGCATTGGGGTTCTCTTGGCCATTCTTTTGTTTTTCGTGATCAGGCGAAGGAAGAGAATGGTTGGAATAGGAAAGCCTGTGGAGGGTACGTTGGTGGCATTTGGGTACAGAGATTTGCAAAATGCAACGAGGAATTTCTCTGAGAAATTGGGAGGAGGAGGCTTTGGTTCTGTTTTCAAAGGAACTTTGGGGGATTCAAGTGTCGTGGCAGTGAAAAAGTTGGAGAGTATTAGCCAAGGAGAAAAACAGTTCCGAACGGAAGTTAGCACAATAGGGACAGTGCAACATGTTAATCTTGTTAGGCTGCGTGGATTCTGCTCTGAAGGCGCAAAAAAGCTGCTAGTTTATGATTACATGCCAAATGGCTCCTTGGATTTCCATTTGTTCCACAACAATAGCCGTAAGGTGTTGTTGGATTGGAAAATGAGATACCAAATTGCGTTAGGAACAGCAAGGGGACTAAATTACCTTCACGAGAAATGTAGAGATTGTATTATACATTGTGATGTGAAGCCAGAAAACATTCTCCTAGATGCTGAATTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCTAAGCTTGTTGGAAGGGATTTCAGCAGGGTTCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGGGTACCTATCACTGCCAAAGCTGATGTGTACAGCTATGGAATGATGCTTTTTGAGTTTGTATACGGTAGGAGGAACTCTGAGCCATCAGAAGATGGCCAATTTACCTTCTTTCCAACCTTTGCGGCAAATGTTGTTGTCCAAGGTGGCCCTGTTGTTAGCCTTTTGGACCCTGTTTTGGAGGGCAATGCTGAGATTGAGGAGGTGACTCGAACAATAAAAGTTGCTTCGTGGTGTGTCCAAGACAATGAGGCTCACCGGCCAAGCATGGCTCAGGTGGTTCAAATCCTTGAGGGGATCTTAGAGGTGAATATGCCTCCAATTCCAAGATCCCTTCAAGTGTTTGTTGACAACCAGGAGAATTTAGTCTTCTACACCGACTCAAACTCCACACACAGTTCACAGGAGAAGAGCAACGTTTCTACGACCTCCTCCTCTCAAGCCAGAAGTAACATCTCTTTAGCAAGCTCCAAGTCCGCGGGAGGAGAAAATTAG

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