Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_26855 LG7 18841932 18843615 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 18841944 missense_variant p.Ala5Thr
C/A 18841949 missense_variant p.Asp6Glu
A/G 18841952 synonymous_variant p.Lys7Lys
T/C 18841958 synonymous_variant p.Ala9Ala
G/A 18841995 missense_variant p.Glu22Lys
G/T 18841997 missense_variant p.Glu22Asp
C/T 18842021 synonymous_variant p.Asp30Asp
C/A 18842031 missense_variant p.Gln34Lys
A/G 18842032 missense_variant p.Gln34Arg
G/A 18842043 missense_variant p.Val38Ile
A/G 18842083 missense_variant p.His51Arg
T/C 18842117 synonymous_variant p.Asp62Asp
A/G 18842213 synonymous_variant p.Gln94Gln
C/T 18842214 missense_variant p.His95Tyr
T/C 18842246 synonymous_variant p.Tyr105Tyr
A/G 18842296 missense_variant p.His122Arg
T/A 18842303 missense_variant p.Asn124Lys
T/G 18842307 missense_variant p.Ser126Ala
G/T 18842316 missense_variant p.Gly129Cys
G/T 18842317 missense_variant p.Gly129Val
C/T 18842319 missense_variant p.Leu130Phe
T/G 18842321 synonymous_variant p.Leu130Leu
A/C 18842326 missense_variant p.Tyr132Ser
C/T 18842327 synonymous_variant p.Tyr132Tyr
A/C,G 18842328 missense_variant p.Ile133Leu
C/T 18842331 missense_variant p.Pro134Ser
A/G 18842360 synonymous_variant p.Leu143Leu
G/A 18842363 synonymous_variant p.Gln144Gln
C/T,* 18842372 synonymous_variant p.Asp147Asp
T/A 18842374 missense_variant p.Leu148His
T/A,C 18842375 synonymous_variant p.Leu148Leu
A/G 18842385 missense_variant p.Asn152Asp
A/T 18842399 missense_variant p.Arg156Ser
A/G 18842419 missense_variant p.His163Arg
C/A,G 18842420 missense_variant p.His163Gln
A/G 18842452 missense_variant p.Lys174Arg
A/C 18842455 missense_variant p.Asn175Thr
C/T 18842467 missense_variant p.Ala179Val
G/T 18842468 synonymous_variant p.Ala179Ala
C/A 18842497 missense_variant p.Thr189Lys
G/A 18842499 missense_variant p.Val190Ile
G/A 18842535 missense_variant p.Gly202Arg
G/A 18842536 missense_variant p.Gly202Glu
T/A 18842552 missense_variant p.Asn207Lys
A/G 18842556 missense_variant p.Lys209Glu
T/C 18842572 missense_variant p.Ile214Thr
T/A 18842586 missense_variant p.Tyr219Asn
A/T 18842587 missense_variant p.Tyr219Phe
T/C 18842633 synonymous_variant p.Ile234Ile
T/C 18842654 synonymous_variant p.Val241Val
C/T 18842663 synonymous_variant p.Val244Val
G/A 18842667 missense_variant p.Gly246Arg
G/C 18842668 missense_variant p.Gly246Ala
G/C 18842708 missense_variant p.Met259Ile
T/C 18842779 missense_variant p.Leu283Pro
A/G 18842781 missense_variant p.Ser284Gly
A/T 18842785 missense_variant p.Asp285Val
G/T 18842874 missense_variant p.Ala315Ser
T/A 18842930 synonymous_variant p.Pro333Pro
G/A 18842936 synonymous_variant p.Leu335Leu
G/A 18842941 missense_variant p.Gly337Asp
T/C 18842947 missense_variant p.Leu339Ser
C/G 18842962 missense_variant p.Ala344Gly
G/T 18842963 synonymous_variant p.Ala344Ala
C/T 18842972 synonymous_variant p.Leu347Leu
A/T 18842982 missense_variant p.Asn351Tyr
A/G 18842989 missense_variant p.Asn353Ser
T/C 18842990 synonymous_variant p.Asn353Asn
C/G 18843001 missense_variant p.Pro357Arg
T/C 18843006 missense_variant p.Phe359Leu
A/G 18843011 synonymous_variant p.Glu360Glu
C/T 18843016 missense_variant p.Thr362Met
C/T 18843039 synonymous_variant p.Leu370Leu
G/T 18843062 missense_variant p.Leu377Phe
A/G 18843064 missense_variant p.Asn378Ser
A/T 18843079 missense_variant p.Tyr383Phe
C/T 18843119 synonymous_variant p.Ile396Ile
C/G 18843143 missense_variant p.Asp404Glu
C/T 18843146 synonymous_variant p.Ile405Ile
G/C 18843148 missense_variant p.Ser406Thr
C/T 18843163 missense_variant p.Ser411Leu
G/A 18843179 synonymous_variant p.Leu416Leu
A/C 18843198 missense_variant p.Lys423Gln
A/T 18843247 missense_variant p.Gln439Leu
G/T 18843253 missense_variant p.Gly441Val
C/A 18843288 missense_variant p.Gln453Lys
T/A 18843297 missense_variant p.Leu456Met
A/G 18843316 missense_variant p.Lys462Arg
A/T 18843323 synonymous_variant p.Leu464Leu
A/G 18843342 intron_variant
C/A 18843346 intron_variant
C/A 18843347 intron_variant
C/T 18843349 intron_variant
T/C 18843355 intron_variant
A/G 18843358 intron_variant
G/A 18843362 intron_variant
A/T 18843377 intron_variant
G/T 18843379 intron_variant
G/A 18843381 intron_variant
A/G 18843401 intron_variant
A/T 18843423 intron_variant
A/G 18843424 intron_variant
A/G 18843425 intron_variant
C/T 18843426 intron_variant
T/C 18843428 intron_variant
A/T 18843434 intron_variant
A/T 18843443 intron_variant
A/G 18843501 intron_variant
G/A 18843515 intron_variant
G/T 18843530 intron_variant
A/G 18843533 intron_variant
A/T 18843536 intron_variant
A/G 18843539 intron_variant
A/G 18843545 intron_variant
T/C 18843548 intron_variant
T/G 18843565 intron_variant
C/G 18843569 splice_region_variant&intron_variant
A/T 18843570 splice_region_variant&intron_variant
A/G 18843597 synonymous_variant p.Lys473Lys
T/C 18843603 synonymous_variant p.Pro475Pro
G/A 18843605 missense_variant p.Arg476His
C/G,A 18843606 synonymous_variant p.Arg476Arg
T/C 18843611 missense_variant p.Leu478Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_26855.1
MCAEADKQALLKLKEGFVHGMELLSSWNGDDCCQWKGVSCNNLTGHVTSLHLRFSNSTRVEDLNYLLDTMPEMEFFGASTELGGKIDSSICELQHLTFLDLSHNYLQGEIPKCIGSLGQLTHLNLSWNGLNYIPYALSNLSNLQYLDLGKNNFVARDLDWLSHLSTLRYLDLSKNNLGAVTDWPSSISTVPFLSELYLNDCGLPQVNPKSISHINSSTYLQILSLSGNHFDSSIMSWVLNVSKVLGVLDLSHNELDGGMIKSFNTLCQLKKLYLGSNKLSEQLSDYLPEFCSTKDLEVLNLDHNPFGKGLLPDFALFSSLERLSLQNTSTVGPLLFGHLPRLKALDLSLNNLNGSLPVFEVTKFASLHFLDLSHNKLNGRLPYSIGQLSNLWFLSISSNELNGDISEEHVSNLSRLKIFDVSKNSLSFNLNTDWVPPFQLGALYASSCILGPQFPLWLKHQKKLQGLYLPFVKHPRCL*


CDS Sequence:
>Vu_26855.1
ATGTGTGCGGAGGCAGACAAACAAGCTCTTCTCAAGTTAAAGGAAGGTTTTGTTCATGGAATGGAGCTTCTATCTTCTTGGAACGGTGACGATTGTTGCCAATGGAAAGGAGTTTCATGCAATAATTTAACAGGTCATGTAACCTCTCTTCATCTCAGATTTTCAAATTCTACACGTGTTGAAGATTTAAACTATCTTTTAGACACAATGCCAGAGATGGAATTTTTCGGTGCCTCTACAGAATTGGGAGGTAAGATAGATTCTTCAATATGTGAGCTGCAACATCTCACTTTCTTAGATCTCAGTCATAATTATTTACAGGGAGAGATCCCAAAATGCATTGGTTCACTTGGTCAATTGACACATTTAAATCTTTCATGGAATGGTCTTAATTACATTCCTTATGCTCTGTCAAATCTTTCCAATTTACAGTATCTTGACCTTGGGAAAAATAATTTTGTTGCAAGAGACCTTGATTGGCTTTCTCACCTTTCTACTTTGAGATACCTTGATCTCTCAAAAAACAATCTTGGTGCGGTTACTGATTGGCCATCATCAATAAGTACAGTCCCTTTTCTATCTGAACTCTATTTAAATGATTGTGGACTCCCTCAAGTCAATCCTAAATCAATCTCCCACATCAATTCTTCCACTTACCTCCAAATCCTCAGTCTATCAGGAAATCACTTTGACTCTTCAATTATGTCATGGGTGTTGAATGTTAGCAAAGTCCTCGGAGTTCTTGATCTCTCACATAATGAACTTGATGGCGGAATGATAAAGTCCTTTAACACTTTGTGTCAACTTAAGAAGTTGTACCTCGGTTCCAATAAATTGTCTGAACAACTCAGTGATTACTTACCAGAATTTTGTTCTACAAAAGATTTAGAGGTGTTGAATCTTGATCATAACCCATTTGGTAAAGGGTTGCTTCCTGATTTTGCATTATTTTCATCCTTGGAAAGACTTTCACTTCAGAATACCAGTACTGTTGGGCCTTTATTGTTTGGTCACTTGCCTCGTCTTAAAGCGTTGGATCTCAGTTTAAACAATTTGAATGGATCATTGCCTGTATTCGAAGTGACGAAATTTGCCTCACTGCATTTTCTGGATCTTTCACACAACAAATTGAATGGGAGACTTCCATATAGTATTGGACAACTTTCTAATCTCTGGTTTTTGTCCATCTCTTCAAATGAGTTGAATGGGGACATCAGTGAAGAGCATGTATCAAACCTATCTAGATTGAAGATATTTGATGTGAGTAAAAATTCTCTTTCGTTTAACTTGAATACAGATTGGGTTCCACCTTTCCAATTGGGGGCATTATATGCATCATCTTGCATTTTGGGACCTCAATTTCCATTGTGGCTTAAACATCAAAAGAAACTACAGGGTTTGTATCTTCCTTTTGTGAAACATCCTCGCTGTCTGTAA


Promoter Sequence:
>Vu_26855::LG7:18839932-18841932(+)
AAAAATGGTTAAAGATGTTTTCAAAATAATATATCTTGTTGTTGGGCAGTTGTTTTAATCAATACTACTTATTATATTAATGCAACTTCAATTTGGAAAAGGGATTGTTTAAACAAAATTGATTTATTTAGTAAGAACCACCTTGTTACATAGATCTTAATTTTCTCTACAAGACAAAGAAGATCAACGGCCAATGAAAAAAAAATGTAAAATAAACCAATGATACTACTAAGTGACAAAAGTGAAAAATGACAATAGGTCGGATCACGACATGTAGGGTATCTACTCGTAACTCGACCTGCTAAACGAAAATTCAACCCATAATCCATCCGTTATTTGGGTATCTACTTCAAAAATATTCACACATATTTTAAAACTCCCGGTACCCGCGAATACTCGCAAAAATTTAAAAAAATATATATATTTTATACATTTTTAAAATAAAATCTAAATAAAATTATAATATATATATATATATATATATATATATATTAAATTAAATATCTATTAAAATTAAATTAAATATAAATTAAATTAAATATAAAAACACATATAATATAAATTAAATTAAATATAAATTAAAATTTAATTTTTTAATTAAATTTAACCTAACTCTCAACAAAATTGCAAGGATAAAATTCCAACTTGAAACACACAAAATACCCCAAAAACCTGCAAGATCAAGAATTCCAAAAATTTTCAAATTAGAAAAGAAAATCATAAACTCCAAACTTAATTGCAAAAACCCTATCTTTAAATAACGGAAAACAACAATCCTATATTTTCAATTTCAAAACTCAGAATCCCGAATAAGAACTCCCAATATTTCACCACGTAGAGGAAAGACAAAAAAAAACTATAAACTGTAACAAAAATTCAGAATATTCTGATTATTTCTAAAATATGAACTATAACACAGTAATATTCAAAGGACTGTGTGAAAAAAATTAAAATGCAAAATCACAACAGAACAAGAAGATAAAGCAAAACACCATGACAAAATTTACATATCAGAAATTATCATATTGTAAGATTGAAAATGTTTCATATAGGATCAGAAAAGGAAATATAAAATAGAAATTAGAGTATTTCACAGATTTAAATTATTTCACAAATTAAAATTTAAGAAAATATTATAAGTTCAAAGAAACCTAGTATTTGAGCCACAAACATATAGGATCCATGAATCAAATCTGAAAAAAAAGGACAAAATAAAGCGACAAATTTAATTTCTTTAAAATATTTTTGTGCGGACGTTTCTTTTATTTGCTCTATCTATGTAAATGATCCAAACTACCTTAATTAAATTTTGTTTTAAAAAGAGATCATGCATTTAAAAAATTGTTTGACTGGGTAGTGAATAAATAAAATGATTTGATATAGTAACAAAATTATCAAAATTTTAAAAAAAATGGTAACGAAAAGAATTAGCTTCAATTGAAGGTGTGATCTTATTACAATTGTTTTCGTTGAAGTACTTTAAATAGATTATATTATTTCATGGTATATAATTCCTCTATTCAATTCAATGTTATTTTGGTAAAAGTCAAAGTAAATGCAGTTTGTTTCTTATTACATTTTAAAATGAGGATTAAAATTTGACAACAATAATATAAAAAGAAAAGTGGTATGAAATATCCTCATTAATAATAAATGTAAGGTGAATTTTTTTTCTCACCTATCACTGTATTCCAGAAGCTCAAGTTTAGATTTGTATTATAATTAGTAGACTTGGAAAATACTAGGAATGGGAAGAACTTGCACAAGGGACGATGTTTGCTCTAAATAAAAAATCTTCAATGTAATAGTTCTTGTCTTTAAATGTCTTGTCCTTGCTAGTTTTCACTTCATATCTCGTTCTTACATTCTACACATTTAGTATCCCAAAACAATTTCAATAAAGTTAGAGTTCATCAGCATGCTTCGCAGCAGACTCTATCAGCTTTGTGTGGCCACCTTTTTATGCGTCCTTTTTTGTCATGGAAGTTTGCATGCAAAGA


Gene Sequence:
>Vu_26855(+)
ATGTGTGCGGAGGCAGACAAACAAGCTCTTCTCAAGTTAAAGGAAGGTTTTGTTCATGGAATGGAGCTTCTATCTTCTTGGAACGGTGACGATTGTTGCCAATGGAAAGGAGTTTCATGCAATAATTTAACAGGTCATGTAACCTCTCTTCATCTCAGATTTTCAAATTCTACACGTGTTGAAGATTTAAACTATCTTTTAGACACAATGCCAGAGATGGAATTTTTCGGTGCCTCTACAGAATTGGGAGGTAAGATAGATTCTTCAATATGTGAGCTGCAACATCTCACTTTCTTAGATCTCAGTCATAATTATTTACAGGGAGAGATCCCAAAATGCATTGGTTCACTTGGTCAATTGACACATTTAAATCTTTCATGGAATGGTCTTAATTACATTCCTTATGCTCTGTCAAATCTTTCCAATTTACAGTATCTTGACCTTGGGAAAAATAATTTTGTTGCAAGAGACCTTGATTGGCTTTCTCACCTTTCTACTTTGAGATACCTTGATCTCTCAAAAAACAATCTTGGTGCGGTTACTGATTGGCCATCATCAATAAGTACAGTCCCTTTTCTATCTGAACTCTATTTAAATGATTGTGGACTCCCTCAAGTCAATCCTAAATCAATCTCCCACATCAATTCTTCCACTTACCTCCAAATCCTCAGTCTATCAGGAAATCACTTTGACTCTTCAATTATGTCATGGGTGTTGAATGTTAGCAAAGTCCTCGGAGTTCTTGATCTCTCACATAATGAACTTGATGGCGGAATGATAAAGTCCTTTAACACTTTGTGTCAACTTAAGAAGTTGTACCTCGGTTCCAATAAATTGTCTGAACAACTCAGTGATTACTTACCAGAATTTTGTTCTACAAAAGATTTAGAGGTGTTGAATCTTGATCATAACCCATTTGGTAAAGGGTTGCTTCCTGATTTTGCATTATTTTCATCCTTGGAAAGACTTTCACTTCAGAATACCAGTACTGTTGGGCCTTTATTGTTTGGTCACTTGCCTCGTCTTAAAGCGTTGGATCTCAGTTTAAACAATTTGAATGGATCATTGCCTGTATTCGAAGTGACGAAATTTGCCTCACTGCATTTTCTGGATCTTTCACACAACAAATTGAATGGGAGACTTCCATATAGTATTGGACAACTTTCTAATCTCTGGTTTTTGTCCATCTCTTCAAATGAGTTGAATGGGGACATCAGTGAAGAGCATGTATCAAACCTATCTAGATTGAAGATATTTGATGTGAGTAAAAATTCTCTTTCGTTTAACTTGAATACAGATTGGGTTCCACCTTTCCAATTGGGGGCATTATATGCATCATCTTGCATTTTGGGACCTCAATTTCCATTGTGGCTTAAACATCAAAAGAAACTACAGGTGCTGCAAATCTCTAATACCTCCATTATGGATTCGTTTCCTGAATGGTTAGGGGACATATCATCAAGTTTGTTATACATAAATGTTTCCCATAATAAACTTAGTGGAGTCTTACCAAAATCACTATCACAAATTAAGACAGGGCTTATGAGTACATGGGATTTTAGTTTCAACAATTTGTCTGGCCCGTTGCCTCCTTTTCCGCCAAAAGTATATGAACTTTTTCTCTCAAATAATATGTTCACAGGGTTTGTATCTTCCTTTTGTGAAACATCCTCGCTGTCTGTAA