Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_26526	LG7	6865864	6866346	PREDICTED: zinc finger protein ZAT11	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
C/T	6866104	synonymous_variant	p.Glu81Glu

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_26526.1

MKRQREDSVDLANCLVLLSRPIEIKPHKLFRPQEFECRTCNRKFSSFQALGGHRASHKTPKQDVKEEEEILRLGNKTKKHECSICGQKFSLGQALGGHMKRHRIALNEGFSSINQALVKVPILKRSNTTRVMCLDLNLTPLQNDLKLLFGDKAPRVDSFV*

CDS Sequence:
>Vu_26526.1

ATGAAGAGACAGAGAGAAGACAGCGTAGATTTGGCAAATTGTCTAGTGCTACTCTCCCGTCCCATAGAAATCAAACCCCACAAACTTTTCCGTCCTCAGGAATTTGAGTGCAGAACCTGCAACCGTAAGTTTTCTTCGTTTCAAGCTCTTGGTGGCCACAGGGCCAGCCACAAAACGCCCAAGCAAGACGTGAAAGAAGAGGAAGAAATTCTGAGACTTGGAAATAAGACCAAAAAGCACGAGTGCTCCATTTGTGGTCAAAAATTCTCTCTGGGTCAGGCACTGGGAGGACACATGAAAAGGCACAGAATTGCCCTAAACGAAGGGTTTTCTTCAATAAATCAGGCTCTGGTAAAGGTCCCCATTCTGAAAAGGTCGAATACTACGAGGGTTATGTGCTTGGACTTGAACTTGACCCCTCTGCAGAATGATTTGAAGCTACTGTTTGGCGACAAAGCACCCAGAGTTGATTCCTTCGTCTGA

Promoter Sequence:
>Vu_26526::LG7:6866346-6868346(-)

TAGTTACTGCACTTGAACACAGAACCATATTGGGAGCATTTTTTAGTTTGGTCAAAGTCAGTATCTCATGCAGAAACATCAACAGAAAATAAACATGTAGTTGAACCTTCGTTTCCTTTTGTGTATGTTGTCACAATACAGAATAATATTGTTTTATCGATTTTATTTTGTACATCGAATATTCTTTTGACTTTATTTACATTGATTTCTTAAGACAGCTTAGTACAGGGCACATCTTGGAAGTCACATGGAAAGGTCTGAATGCTACTCACCAAAGTTAAGCATTCCTGTGTTACCTATCAAGAGTTGAGACCTACCTACCAAAGGTTAAAAGTTGTCGACCCAAGATTGAGAATTACCTATCAAAGGTAAACAACTGTCTATGGTCGATTAAATTTGAATATTATATTGCAAAATCTAATGTTTCTTAACGTTGGTGCTTTAAATTTGAATATTATAATGTTTTTGAACGTGGTCATTCAAAACTGCTTCTTCCACAGGCCAAGGCACGTTTGATTGTAATGTTCTGATTTTATTAACAGGCCAAGGCACTTTTGCTTTTGCTTGCAACGTCTGATTTTATTAAACAATCATTTTTTAGCAGATATTTTGTTACATATTTTGAATTTTCTCGATCATGGACTTGATTCACCAGCTCTATAAGACATTTCTGTCACTCCAAAATCATCATCAGAAATCATTTTTCTCTCAATTTCTCTTAGTTTCATTCTTTCTTTTTTCTTTTTTTTTCTAAAAATATTTTAGGTTTATTTTATTATTTTTTTAGAGATCTTTACTAGTTTTTATATCATTAGAAATTTTGAAAAGTCTTATTGTGTCTTGGAGGCTTGCGCAATACATCGCGGATAAATCCTTAAGGACAGTGATCTACACGTCTCAGGAAATCCTTTGTTTGTGATCTTTATTATTTTATTGTCAGTTTTTACAATATATTATCTGTAAGGGTCAAGAGTTCTTTATCAAATAATAAGTGTTGCATGCTGATGGTCAAGTGCCTCTTGCTAAGGATTATGTGTCGTATGCTACCAATACCTAACCGTCACATGTCAAAGACTACATGCCTTTTACCATTACTATGTATCATCTATCAAAGATGATTGTAAACCACCTATTAAGTGGCCTAGTTGAGTACGTGTCAGCCTACCACATTTGATGATATATCACCTTTTATGCAACTTAGTAAAATTTGGCTAATCATTATTACCTCATTCAAGGTAAATGGTTCATTAGGTCATTAGGTCTATATCCAAGTCCATTCAGGTAAAGACTCATAAGTATTAAATTATGATATAAATATAATAGTAATAGCGATTTGTACCTATTTTTTACATTATAATTACCATTTTGTCAGTTTACTGATCTGAAAATTGACTAGTGTGGGAGAATTTTCTATATACACAAAGCTCATGTATCTTGTGGAGAATAAGTACCAAGAAAAATCTATTTACGAGATACGTTTGCCTATGTAAGAACACATTCCTAAGTTTCAAAAAGAAGGACCACTTCCTTCTTGGGTTGAATAGCTCACCGCGCATGACTTTGTCACTGCGCAGCACACCCCAACACGCACACACCTTGTCATCATACAGTTAAAATATTTTGTAAACCAGCGTGTGTAAAATACGTAGAATATGACCATTATTAACACTCTTCTCTTAATTCAATAATGTTCTTAAGAAAGTTATTTAATGTTGAAAGTCATATTAAAGTAAGGGATTTGGCCGTTTAGGAAATACAAAGTCAGATAGGCCAACAACCGTTAACACTTTTACTTTCTAAGTTTCAACAGGTTTGAAGGATTCGTTTAGACAAAATTAGCCTCCAACAAGTGGTTTATTTGTTTAAACGAGTCAAAGACCTTGACTTTGTCTAAAACGGCCTATAAATACCAATCTTAATGCCCTAAGTTTGACATCTCAATTTCAACACCTTCTTTCTCCTATTTCATTGTCTTAGTTAATTCTACGTGAGAAGTGTCC

Gene Sequence:

>Vu_26526(-)