Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_26480 LG7 6260628 6261152 PREDICTED: ethylene-responsive transcription factor ERF027-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, glucosinolate metabolic process, regulation of transcription, DNA-templated, glucosinolate metabolic process, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, defense response to fungus, defense response to fungus, glucosinolate metabolic process, defense response to fungus
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
C/T 6260972 synonymous_variant p.Ile115Ile
C/G 6260990 missense_variant p.Cys121Trp
A/T 6261001 missense_variant p.Asp125Val
C/G 6261142 missense_variant p.Thr172Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_26480.1
MAPSLSSKRHPLYRGIRSRGRKWVSEIREPRKASRIWLGTFPTPEMAAAAYDVAALALKGDGAVLNLPHSVSKYQIPATNSAADIRTAATAAAAMMKAEIEASHNIASQTETTHIDATTWCFENDFLDEEAVFGMPSLLVDMAGGMLLSPPRMSPPPSDNSPEKQAAETLWTYF*


CDS Sequence:
>Vu_26480.1
ATGGCTCCCTCACTCTCTTCCAAGAGGCACCCACTCTACCGAGGAATCCGTTCCCGGGGAAGAAAATGGGTCTCCGAAATCCGCGAGCCGCGCAAGGCCTCCCGCATATGGCTCGGCACCTTCCCCACGCCGGAGATGGCCGCCGCCGCCTACGACGTCGCAGCATTGGCCTTGAAAGGCGACGGCGCTGTTCTCAACCTCCCTCACTCCGTTTCCAAGTATCAAATCCCTGCAACCAACTCTGCGGCGGATATCCGAACTGCTGCCACCGCTGCGGCCGCAATGATGAAGGCTGAAATTGAAGCTTCCCACAACATTGCATCACAAACTGAAACTACCCACATCGATGCGACAACCTGGTGCTTTGAAAATGATTTCCTTGACGAGGAAGCCGTTTTCGGCATGCCAAGTCTTCTGGTTGACATGGCCGGGGGAATGCTTCTGTCGCCGCCCAGAATGAGCCCGCCACCGTCCGATAACTCGCCGGAGAAACAAGCTGCAGAGACTTTGTGGACTTATTTTTGA


Promoter Sequence:
>Vu_26480::LG7:6258628-6260628(+)
TCAGTAGCGTTGCCATTTTGACTGGCAAATTATCAATCAACTTGGACTTTGGTTATATTGGGTCAGTTTGGACTAAGCAGCCTGTTTATTCCCCTTAGAATTTAAATTTTACATTATTATGAAATATCTATTTCGAAATGAAAACTCAAGAATATTTTAGGGTCCACAAATGAATACTATAAACCTCTATGCTCATAACATTTTAAGAAAATCGTATATTTGTAAATGATAATTACAGATAGGTTTATTGAATGAACTTGTGTACACGAATTGGTTTCTGTATGTGTCCAGGCCAACCCTTTTGGATCCCACCTCTCAAGTTTTGTCAAAGGAAAAGTTAAACAGGGCTTGTGATTTAGATTATTATATATATAATTTTTTTCTCTTTATTTTTATTATATGTTTTTTTTCAAATTTTTTAAATATATAAGACACGTGTGTGATCTGAAACTGATTCAAATAGTAAATTGTTTTATATTATTAAATAATGATAAACATGAATATTATTTTATAGGATAGGCTACTAGAACAATTTCAGTCATGCTGAATCCATCATCACAATGTTGAGGGATCAAATGCAAACATTTCACATTAATAATTAATTAAATTATATTTTAGAAAATGTGACTGTTAACACATATATATAGTAAAATAAAATATTTGTAATGATTTGATAATTACATTGGTTCATTATGTAAACTCTTTTCTGATATCTAATGCTGTCATATGATTTTCCATGTCACTAGACAACAACGGAAAACATATTCAAGTATCACATTCAGTTGTAAATGAAGGAAATGACAATTGGACCCAGAATACCAAAAATATTATAATAGTAGTGAAACATGTGGAAACAGAATCAGACAACACTTCAGGTAGCTTGTGACTGCAACAGTAAGGACAAATATTTCATGAAGTTCTACATTAGCTAAAAGTTGTGAAATTGTATTCATATGAGAAAATCTGGATTTATACAGACTTTTTTTAAAATATATGATAAGATATTTGGATTGGTAAATAAGAGTTATATATATATATATATTATCAATGTTCAATAGTTTCACCTAATTTAGGAATGGAGGTTAATAAGAGTTTAAATATTTCTTTTACTATATGAATGTCTTTCAAGATAAAATCATTACGAAACACAGAATCCAAAACGAACAATATATGGAATGAAGAGTGATTAATCTTAAATATATTACTCAACAAATTTAGAATTAAAACATTGTCTCCCACCATAAAATTGAGGTTCTAAGATGAACCATAAGTTCTCTACTAAAAATAAATAATCATTTTCAAAAAGAATATTTCTTCACTTCTAATAAATGACTTAAGATAATTTGTTGTGAAACCTCGTTATCAGTTTCATTATAAAATAAAATCTTCTTATCACCTGTGTGTATAAATCCTCTCAATCGGAGGAGTTTGATTATTGTGTAAAATGTGTGACCGATTTTTAAGGTTTTACCGGTGGATCGACCGTTAATTGCATAGTATCATGAATAGATTTCTTCCGAAACATTGTAATCGCATTAAATACATCTAGTAATCTGACTACCGTGGTCACATCTAAGTAGTTAGAGTATCTTTATATACTTTAACCTTTTTAATGTAAAAAATTACATCTCGTGCACATAATTAGAAAGAATCATCCTATCTTGACCCCTGGTCAATTTTTTAATTCATCTGACATTTATTTTCTCATCTTTTTTTTAATAACTATATTAATCTAAAAGTAAATTATAAAGTGTTCGATGGACTTCTCAAAATATGATGATCCTTAATAATTTGGTTTCGCCCATCTTTTTTTCATATCGAAATTATCTCATTTTTTCTTCATTTTCCCTTCTTTCCTGATCTAACCCCAGTTCTGAATTAGCCCTTTTTAATTTAAGTGCGATGCATGATTTTCCTGGTGTTATATATGCAAGTTATAGTGTCCCTCCAAATATCACCTCTTACCAACAAACACCGTTAACCTTAGAACAGCACCACCA


Gene Sequence:
>Vu_26480(+)
ATGGCTCCCTCACTCTCTTCCAAGAGGCACCCACTCTACCGAGGAATCCGTTCCCGGGGAAGAAAATGGGTCTCCGAAATCCGCGAGCCGCGCAAGGCCTCCCGCATATGGCTCGGCACCTTCCCCACGCCGGAGATGGCCGCCGCCGCCTACGACGTCGCAGCATTGGCCTTGAAAGGCGACGGCGCTGTTCTCAACCTCCCTCACTCCGTTTCCAAGTATCAAATCCCTGCAACCAACTCTGCGGCGGATATCCGAACTGCTGCCACCGCTGCGGCCGCAATGATGAAGGCTGAAATTGAAGCTTCCCACAACATTGCATCACAAACTGAAACTACCCACATCGATGCGACAACCTGGTGCTTTGAAAATGATTTCCTTGACGAGGAAGCCGTTTTCGGCATGCCAAGTCTTCTGGTTGACATGGCCGGGGGAATGCTTCTGTCGCCGCCCAGAATGAGCCCGCCACCGTCCGATAACTCGCCGGAGAAACAAGCTGCAGAGACTTTGTGGACTTATTTTTGA