Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_26258	LG6	39591089	39591979	PREDICTED: TMV resistance protein N-like	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
C/A	39591709	missense_variant	p.Phe207Leu
C/A	39591728	missense_variant	p.Pro214Thr
G/T	39591973	missense_variant	p.Leu295Phe

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_26258.1

MNGSEEYEYEIVKKITEEISTKLNRPPLHIADYLVGLKVRMQQIQELMGGEFDKKVTMLGIHGMGGIGKSAHSRAMYNLMAHQFEALHFLANVREKSDKDGLVHIQETMLSELVGERNIKLGDVHRGIPILQHRLCGKKVFLVLDDISKKEQLHATAGGLDWFGPGSIIIITTRDKHMLDVHGIQKQYMVDEINFVEALELFKWNAFKNKEVDPCYKEVTERAMYYANGLPLALETIGSNLFGKTLDAWESALETYERIPNRDVQEVLRVSYYRLDAYEDTLQISLKLEDFLKNLV*

CDS Sequence:
>Vu_26258.1

ATGAATGGCAGCGAAGAATATGAATATGAGATAGTGAAAAAGATCACAGAAGAGATCTCCACTAAGCTTAATCGACCTCCCTTGCATATTGCTGATTATCTTGTTGGTTTGAAAGTTCGGATGCAACAGATACAAGAACTCATGGGTGGTGAGTTTGATAAGAAAGTGACCATGCTTGGGATTCATGGAATGGGAGGAATAGGAAAATCAGCTCATTCACGTGCGATGTACAACTTGATGGCACATCAATTTGAAGCTTTGCACTTTCTTGCTAATGTCAGGGAGAAATCAGATAAGGATGGTCTAGTGCATATCCAAGAGACAATGCTGTCTGAGTTGGTGGGGGAAAGAAATATCAAGTTAGGAGATGTACATCGAGGAATTCCAATACTACAACACAGACTTTGTGGGAAAAAGGTCTTCCTTGTGCTTGATGATATTAGCAAAAAAGAACAATTGCATGCAACTGCCGGAGGACTTGATTGGTTTGGCCCTGGTAGCATCATCATCATAACAACAAGGGATAAGCATATGTTAGATGTTCATGGAATTCAAAAACAGTACATGGTCGATGAAATTAACTTTGTGGAAGCCCTTGAATTGTTTAAGTGGAATGCTTTCAAAAACAAAGAAGTTGATCCATGTTACAAGGAAGTCACAGAGCGTGCAATGTATTATGCCAATGGCCTTCCATTGGCTTTGGAAACGATAGGCTCGAATTTGTTTGGCAAAACCTTGGATGCATGGGAATCTGCGTTAGAAACTTATGAGAGAATTCCAAATAGAGATGTTCAAGAAGTTCTAAGAGTTAGCTATTATAGGTTGGATGCTTATGAGGATACGTTACAGATAAGCTTGAAGCTAGAGGATTTCCTCAAAAATTTGGTCTGA

Promoter Sequence:
>Vu_26258::LG6:39589089-39591089(+)

TATTATTCCAGCTCATAATCTGCCCATTCTTGATAACCATATCCAGGATAATACAGAAGAAGAACATCATACTCCTAGACGAACCACTAGAGTTAGAAAACCCCCTGCCTACCTAAAAGATTTCCAGATATCTTCTTATAGCACCACTAACACTAAATACCCTATTGAAAGTGTTTTGACTTTTGACAGATTATCATCTCTATATAAAGCCTTTATTTTTTCTCTAGATAGTCTGGTTGATCCCAAGGATTACAAGGAGGCCTTGAAGCATGCTCATTGGCGACAAGCTATGCAGGAAGAAATTGTTGCTCTTGAGCACAACCAAACTTGGACCATCACCACCCTTCCCCCCAACAAGAAGGCCATAGGGTGCAAATGGGTGTACAAACAAAACAAAAACCTGATGGGACCATAGATCGATTCAAAGCTCGCCTAGTTGCCAAGGGCTACACTCAAATGGAGGGTATTAATTACTTTGACACTTTTTCCCCTGTAGTTAAACTAACCAGTGTTCGCTTTATTTTATCTTTAGCAGCGTCTCAAAATTGGCCTCTACGATAGTTAGATGTCAACAATGCCTTCTTACATGGTGATTTAAGTGAAGAAGTTTATATGCAGCTGCCACCAGGGATCACTGCCCCAGGTAAAAACCAGGTTTGTCTTCTCCACAAATCCCTCTATGGTTTAAAACAAGCTAGCAGGCAGTGGTATGCCAAGTTTTCCTCTTTTCTTCTCTCTCACAATTTTTCACAAACATCTGGTGACCACTCTCTCTTTACCAAACATAGTGGGGATAATATCACTATAATACTTGTTTATGTTGATGATATCATACTTACTGGTAACAACATACATGATATTGATACCATTACAACCATGCTTGATGATCAATTTAAAATAAAGAATCTTGGTAATCTATCTTACTTTCTGGGTTTCGAGGTTGCTAGAAGCAAAGAAGGCATCCTTCTGTCATAGCGAAAATATGCGTTGGACCTTCTCACAGAAACAGGGATGCTTGATGCAGCACCTGTCAGCACTCCAATGAATTTCTCCACCAAAATATCCTCTGAAGGTGATCCTCTTGAAGATCTCGCTGCTTTTAGACGCTTAATCGGAAGACTTATTTACCTCACCAACACTCGCCCGGATATAACCTATGTTGTACATCGTCTAAGCCAGTATGTCGCTGCCCCCACCAAACTCCATCATCAAGCAGCCTTCAGAATCCTGCGTTATTTAAAGCGGACTCCTGGTCAAGGTATACTTTTAAGTGCAACTAACAATCTCACTCTGCAAGCTTACAGTGATTCAGACTGGGCTGGATGCTCTGATACCCGCAAATCAACCACTGGATACATTGTCTACTTGGGTAACTTGCCTATCTCCTGGAAATCCAAAAAGCAGAGTATCGCGCTCTTGCTCAAACTGTCTGTGAACGGCTCACCAATCTTAGGAAGGACCTTCGCCTCCCACTCTCCCAGCCTGCTACCACCTACTGTGATAACATGTCTGCTATAAAAATTGCTACCAACCAAGTTTTTCACGAACGTACGAAACATATTGAAATTGATTGTCATCTCATTCGGGAAAAGGTTCAAGACGACACTGTCAAGCTCCTTCCTATACACACTACACTACAACTTGCTGATATTCTGACCAAGCCTCTTCCTCCTTCTACCTTTCACAACATTAACTCCAAGCTTGGCATCATCAACATCTACGCCAAGCTTGAGGGGGACTGTCAGAATACAATAAATGACTGATTACTTTTAGTTAGCTTTTGGTTCTTTTAGTTCCTTTAGTTTAGTTCCGTTCTATATATATTTACTCCTTTACCTTTTGTAAACATAAGTTTCAGATACCCATAAGCAATAATATACTTTACTTTTTACACGGTGCTTTCTCTTTGTTCTCTCTCTCTTTTTCCATGTAAGTTTGCTTTTCTCTGTGCTACAATGTCGGTGAATATACAGATGCTCCAATTGCATATTTTCTCTTGA

Gene Sequence:

>Vu_26258(+)