Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_26131 LG6 35747913 35751783 PREDICTED: transcription activator GLK1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 35748001 5_prime_UTR_variant
T/A 35748005 5_prime_UTR_variant
C/T 35748020 5_prime_UTR_variant
A/T 35748144 5_prime_UTR_variant
A/G 35748310 missense_variant p.Glu19Gly
G/A 35748325 missense_variant p.Gly24Glu
A/T 35748326 synonymous_variant p.Gly24Gly
T/C 35748336 missense_variant p.Phe28Leu
T/C 35748337 missense_variant p.Phe28Ser
T/A 35748484 missense_variant p.Ile77Lys
A/G 35748555 missense_variant p.Lys101Glu
G/A 35748693 missense_variant p.Glu147Lys
T/A 35749114 synonymous_variant p.Pro192Pro
G/A 35749219 intron_variant
T/A 35749279 intron_variant
T/A 35749316 intron_variant
C/A 35749328 intron_variant
A/T 35749620 intron_variant
A/T 35749621 intron_variant
A/C 35749628 intron_variant
T/C 35749637 intron_variant
G/A 35750078 synonymous_variant p.Pro316Pro
C/A 35750083 missense_variant p.Pro318Gln
T/C 35750240 intron_variant
A/T 35750343 synonymous_variant p.Pro335Pro
G/T 35750540 missense_variant p.Gly356Val
A/T 35750662 intron_variant
A/C 35750801 intron_variant
A/T 35750804 intron_variant
A/C 35750805 intron_variant
A/G 35750813 intron_variant
A/G 35750822 intron_variant
C/T 35750829 intron_variant
T/C 35750835 intron_variant
T/C 35750881 intron_variant
G/A 35750893 intron_variant
T/A 35750932 intron_variant
T/A 35750944 intron_variant
C/T 35751019 intron_variant
T/C 35751073 intron_variant
T/A 35751154 intron_variant
A/G 35751241 intron_variant
A/G 35751270 intron_variant
T/G 35751382 intron_variant
T/C 35751451 synonymous_variant p.Leu406Leu
G/T 35751519 synonymous_variant p.Gly428Gly
C/A 35751770 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_26131.1
MLAVSPLRSTRDEEQGEMESFSIGTDDFADLSEGNLLESINFDDLFMGINDDEDVLPDLEMDPEMLAEFSLSEESEIVSSVSVVNNKSDDRNENNIVTTEKQDEVIAANFCSDSGSNSGSSRGEEIASKSEESIHSVVVNPSPKESEKGRKSSTHSRNNPLGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAARLSQRKQFMGAASVGRGGGGSKRDVNPWLAPTMGFPHMTPMHHFRPFHVWGHHTMDQSFMHMWPKHLPYSPSPPAWPPRTAPSPPPPDPLYWHQHQRAPNAPTPGTPCFPPPLTSTRFGSQTVPGIPPHHTMFQIVDPGIGIPATQPPPRPLLDFHPSKESIDAAISDVLSKPWLPLPLGLKGPALDGVMGELQRQGIPKIPPSCA*


CDS Sequence:
>Vu_26131.1
ATGCTGGCGGTGTCACCTTTGAGGAGCACAAGAGATGAAGAGCAAGGGGAGATGGAGAGCTTCTCCATTGGAACTGATGACTTTGCTGACTTATCAGAAGGAAACTTGCTTGAAAGCATCAACTTTGATGACCTCTTCATGGGAATCAACGATGATGAAGATGTCTTGCCAGATCTGGAGATGGACCCTGAAATGCTGGCTGAGTTTTCCCTCAGCGAGGAATCGGAGATAGTCTCGTCAGTTTCAGTGGTAAATAACAAATCTGATGACAGGAATGAGAATAATATAGTTACTACCGAGAAACAAGATGAGGTTATAGCAGCCAATTTTTGTTCAGATTCTGGTTCCAATTCCGGGTCTAGCAGAGGGGAAGAGATAGCAAGCAAAAGCGAGGAATCAATTCATTCAGTGGTGGTGAATCCATCCCCTAAGGAAAGTGAGAAAGGAAGAAAATCATCAACGCATTCAAGGAATAATCCGCTAGGGAAGAGAAAGGTGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAGCTCGGAGTGGATAAGGCTGTACCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACTCGCCATAACATTGCCAGCCACCTTCAAAAATATCGATCCCATAGGAAGCATTTGCTAGCACGTGAAGCTGAAGCAGCAAGGTTGAGTCAAAGGAAACAATTCATGGGTGCAGCAAGCGTAGGTAGAGGAGGAGGAGGAAGCAAGAGAGACGTGAACCCTTGGCTTGCACCTACCATGGGTTTCCCTCACATGACACCAATGCACCATTTCAGACCTTTCCATGTATGGGGGCATCACACCATGGACCAGTCCTTCATGCACATGTGGCCTAAACATCTCCCATATTCACCGTCCCCGCCGGCATGGCCACCGCGAACGGCTCCCTCTCCGCCGCCTCCGGACCCTCTTTATTGGCACCAACATCAACGGGCTCCAAACGCACCAACCCCAGGAACACCGTGTTTTCCACCGCCTCTGACAAGCACGAGATTTGGGTCTCAAACTGTTCCGGGCATCCCTCCACACCATACAATGTTCCAAATAGTAGATCCAGGCATTGGCATCCCAGCCACCCAACCACCACCTCGACCCCTCCTCGATTTTCATCCGTCAAAGGAGAGCATAGATGCAGCTATTAGTGATGTTTTATCAAAACCATGGTTGCCACTACCACTTGGCCTTAAAGGTCCAGCCCTTGATGGTGTAATGGGTGAACTACAAAGACAAGGGATTCCCAAAATCCCTCCATCTTGTGCTTGA


Promoter Sequence:
>Vu_26131::LG6:35745913-35747913(+)
ATTAAGGTTGATCTAATCACAATTAAATAATAGAGACTGTTATGTTTTTAAATATAAAGAATTATATTCTAACTATCAATAATAATTTTTAGTCTCATGATAAACATTTAATTCAAAATATTCAAAAGTTGATAAAAGAGCCAAAGTCATAAAGACTAATTTCCAATGAGACAGTTATTCAATATATGTTAGTGTTATCTTTAAAATATTAACTCTTATTAATTCAGTGGATCAACCTAATATTCAATAGATAATTTTGTTAAGATATGCAAAATATTTTATTAGCAAATATTAAACAATTAAATATTGTGTTAGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATGGTACATTACTCTTTAAAATAATTTATCAAAATTATTCTTTAAATTTTTTAATATAGTATTAGAATCAGTGTTTCTTTTTTTCATTGAATATTTCTGATGACTCTTCTGCAACCGGATTTGTGACCAAGTCAGGTATATCTAACTCTGCCCTTAATCTTTTCGTTTTTACTAAGGGTAGTGATTAGATAATTGATTCAAGTTTCACTGATCATATGGCTTGTGATCCTCATATATTTACTAATTTTTTCTCTAATTGTTTTAAAAATGTTATTATTAATGTCAATGAGGTCTCATCTCCCATTAAAGGTATAGGTATTATATCTCTCTCACCCTCCTTATCAATATGTTTTATTTGTTCTTACATTAAATTGTAATCGTATCTCCGTCAGCAAGTTAACCAAATCACATTTTTTGTATTGCCTTGTTTTATCCAATCCATTGTCTTTTTCAGAACATTCATTCCAAAGATAAGATTGTTAGCGGTAGAGAGTGAAAGACTGTATTATCTTAAAAATATCACACAACAAATCTATAAAAATGTTGGCTTGTCTTAAGAATGATCACGTACAAGATAAAAATAAAAAATAAGTGATTAGGACATCCTCTTTTGGTTATTTAAAAAAATTATTTTCGTCGTTATTTCATATATGCAATATTTCTTATGTATTAAGGCGAGAAACCTTAAAGTGAATGGTCAGACAAAAACATTAGTGTAGGGCGTCCAAAAATGGTTTGAAGGTGAAAAATATTAATAATTGTGTTAATTCGTGTCTCATAGATTTTTTTTCCCACTTGTCTCAAATGTAATATGGTAGTCAAAAGTTAATTTAAATCACAACGTGGAATTACATTTCATGATTCAAAGTGGATTTCATCAACCTTAATTTTGGCAAATTTCAACCCAAAGGAACTCATAGTTCTTGTGTGTAGTCAATTTAGGAATCCAGATTGGTGCCCATAATTTTCTTTGCAAATCATCAAGTGGCAGTGGAAGTGTAATATGGGGTCTACCTAGGTAGTTAACAGCTTAGGGAAGTCACGTAATGAGGAGCTTATCCAATTATACAGCTTTTCAAATATTTGATTATTAAGGAAACTAGATAAACCTTATCGGTTTAGAGAACAAAAATGTACAACAGGTCAATTTGTCCACCAACATCACCATACCTTACATCACTTTCACTTACACCGAACTGTTTCGTCTTTCAACACAGTGACTGACAGATATAGCTTCTATCACTCTCTCTCTTCATACATATCCATTAAACAGTATTCCACTCTCAGTAACATTTTTTTCAAAGAATACATGTATAATGTCATGGACAAATATAGAAAAGATAACTGTAAAAATCCTGTTGTGAAAAAGTTCCATGAAAATAGGGTTATTATTCTAACTAAAATTACCAAATGTCCATGATTACATTTGAATTTTCTAAAAAGTACTTACATATGCACATCTCTATGCAAATACTTTGCTCATTTTTTCTAGCTTAATCTTTTTTTTTCTCTTGCCATGTCATGATACATATCATCTGCATTTATTTCTCTAATGCTTATATCAGCATGCTATGTATATTTTTGTTTATAAAATTCCCTTTCAGACACAAAAAAGGGCA


Gene Sequence:
>Vu_26131(+)
ATCCACAAATAAAAAATATACTATATAATATATTAATGTAGACCAAGCTTGCAAGTAGCACACGCCCCCAAAAAACCGTGAAAATACTTCTGTTTTGATACTCAGAGCTAAGTTGTGGTGGAGAGCGGTCCCAGCTAGCTTCTTCTTCACACACTCCCTTTCTTTCCAGAAAAGGCAACACAGACATTTTCAAACTAATTAATTCATCTTCTTTTGAATCCCTCAGCTTTGAAGATTTTCATGCACAGGCATATGTGAACACTGCTTTATATAAGTGGAGTTTGTTTTGCTTTTGTTGTTATATATTCATTCACTCCGAGGTTGAAATCTAGATTAATATTCATGCTGGCGGTGTCACCTTTGAGGAGCACAAGAGATGAAGAGCAAGGGGAGATGGAGAGCTTCTCCATTGGAACTGATGACTTTGCTGACTTATCAGAAGGAAACTTGCTTGAAAGCATCAACTTTGATGACCTCTTCATGGGAATCAACGATGATGAAGATGTCTTGCCAGATCTGGAGATGGACCCTGAAATGCTGGCTGAGTTTTCCCTCAGCGAGGAATCGGAGATAGTCTCGTCAGTTTCAGTGGTAAATAACAAATCTGATGACAGGAATGAGAATAATATAGTTACTACCGAGAAACAAGATGAGGTTATAGCAGCCAATTTTTGTTCAGATTCTGGTTCCAATTCCGGGTCTAGCAGAGGGGAAGAGATAGCAAGCAAAAGCGAGGAATCAATTCATTCAGTGGTGGTGAATCCATCCCCTAAGGAAAGTGAGAAAGGAAGAAAATCATCAACGCATTCAAGGAATAATCCGCTAGGGAAGAGAAAGGTGAAGGTAAGTTGTTATTATTGTTGTCATTGATTCCTATTTTCTTGCTTTTTGTTTAGGCTAATTCCAGGAAAGTTCATACACGTTAAGGATAACTCTTAAAGGTCTTTCTATCTCTATTATGGGTTTCTATAGTTGCAGAGTGTGTCCAAAGAACTCAGGAGTGGCGTTTAAGTTAAAGTGACAGAGAAAGAGAAATGCATTTAGTGTTAGAATTTTGGAATGAGTTTGATGTATTGTATTGTAGTAATGAGTTGTGTTGTGTGTGTGTTTTCTTGGGTTGTGTGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAGCTCGGAGTGGATAAGGCTGTACCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACTCGCCATAACATTGCCAGCCACCTTCAAGTAATATTCTTCAACTTTGTTTTCTCTCTCTTCCACAAGTTTCAACCCAGTCACTCAACAAGAGTCGATACAAAAATAAATAAAAAATTAGATTATGCTTCTTCTTCTTACTATTATTATATGGTTGTTTTTTCTTTGATAAACAAGCTCAATTATCACTGAAAAAAATGAGTACACAAGTAGTAATTATCACTGATTTATTATATGGTTGCAGAAAGACTTATTATTAAAGATATATATCTACTGATATGAAAACTTTTTAAAGTTAATTAAATTTGCGATTCACACAGATTCAAATTTGTGCCTAGAGTTGTAAGGTTTGTACATTTAGTGAGATACTGTACTGTTATTAAAACTTGACACATCCCAGTAAAAATTAAATTTACTAAGAACTTTGAAAAGTCTTGTGCATAAGTCTTTCTTCTTAATTGACATATGCAATTATTAATGTGCATATGTTGCAGCAAGAAAGAAAGTTAGGTAAATTTTTTAGTTAAACTAGGATCTTGTATCAGAAACATGAACCCTATGAATAGAAAAAGAGCTTAGTTTTACTGAAGAGGGTTTCTAAAGTATGCAGTTTTGGTGGCAGAAATATCGATCCCATAGGAAGCATTTGCTAGCACGTGAAGCTGAAGCAGCAAGGTTGAGTCAAAGGAAACAATTCATGGGTGCAGCAAGCGTAGGTAGAGGAGGAGGAGGAAGCAAGAGAGACGTGAACCCTTGGCTTGCACCTACCATGGGTTTCCCTCACATGACACCAATGCACCATTTCAGACCTTTCCATGTATGGGGGCATCACACCATGGACCAGTCCTTCATGCACATGTGGCCTAAACATCTCCCATATTCACCGTCCCCGCCGGCATGGCCACCGCGAACGGCTCCCTCTCCGCCGCCTCCGGACCCTCTTTATTGGCACCAACATCAACGGGTTAACTCTTTTGACTATGAAAATTCTTTCAAACACTGTTCACTCAACACACAATCACATTCAAGTAGCAAACTGTATGCTTGATTCATTGTATTCGAATATATAGGACAAGAAAAGCTCTTAAATTTTCTCCAAAAGAAACAATATGCCCTTATATCTTGTGTTTGTCTATCTAAATTAATAGGTTCGTTCTTGTTTGATACTGCAGGCTCCAAACGCACCAACCCCAGGAACACCGTGTTTTCCACCGCCTCTGACAAGCACGGTAACTATTGACCTTACTTTTTTGGAACCACCTACGTTGTCTTCTCCTTCCAAATTTGGATCCTTTTGAGAACAACCTTACTGTATATACAATATCAAAATGCTGGTTCACTCACTATAGAATGTTAACTTGCAGAGATTTGGGTCTCAAACTGTTCCGGGCATCCCTCCACACCATACAATGTTCCAAATAGTAGATCCAGGCATTGGCATCCCAGCCACCCAACCACCACCTCGACCCCTCCTCGATTTTCATCCGGTAATTCCAACTCATTCAATGGAAAATATATATATGTCAATTCTTTTGTTTTGTAAGATTATTTTTTAATCAAGTCAATAACAAACTAATCTATAGTAAATTATACAGTTATTAACATTAATTCAAAAGACTTAGTCAAGTATAGAGTCTCCAGTATATAGATACAAACAAAACTATTATTAGTACTAAAACAATATTTTACTCATAAAAAATGTTATTTATATTATGATTCAACTTTTTATATATATATTGAGGGTTTATTTCTAAATTCAACAGTAAATAGTTTTGTTTTAATTAGATTGGTTTTAAAAGAAATACAAAATTAATCGTATTTTAAATAAAACATGTTTTTATTTGAAAGATCAAACTCACTCCACGAAACTATTACTTATGATATATATATTACTAAACCTAAGTTATTTTTGGGTGTGAAAATGTTTGAATGCTTACAAATTAAATCACGGATTTTTTTATTTTTTTTTTGTCTTTATTAATTTCTTCTGTCATTTTCCTACTTCTCTTTCTGTCCTCTCCTTTCCCGTCGTTGGTCCGTGTCTATAAATCCAAAGTTCTATAAACTGGATTCACAACTTTAAGCGAGTTAATTCCATTTTTCATTTTTAAAATTAAAAAAAAGGAAGTAATTATTTTTGTACGAAAAAATTAAGAAACTCAAACTGAAACGCACGACACAGGTCAATATTTTATAAAAATAATGTTGCATGGTTAATTTAAGTTATGTGTTCATGTTTGTTTTGACAGTCAAAGGAGAGCATAGATGCAGCTATTAGTGATGTTTTATCAAAACCATGGTTGCCACTACCACTTGGCCTTAAAGGTCCAGCCCTTGATGGTGTAATGGGTGAACTACAAAGACAAGGGATTCCCAAAATCCCTCCATCTTGTGCTTGAATGGCAAGTCTAAGAGACATGGTGAATGCCTCAAAACCCTAATTCGACGACTTCTCAGTTCTCTTCTTGTATGCCAGAATGTGCATATTTGTTTCCTATGTTACTTCTATCATATACTACGAGGGAAGAGAAACATAAATATATATAACTTTTGGAAGAGAAACATCTTTGTACTAATCTTAGTAAATCTACGAGACTAAAATAAATGATGAGGAATTTCCAGAAAGTACTGTG