Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25782 LG6 27185852 27186658 PREDICTED: myb-related protein Myb4-like
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Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 27185911 synonymous_variant p.Asp20Asp
G/A 27185920 synonymous_variant p.Thr23Thr
T/C 27185954 missense_variant p.Trp35Arg
G/C 27185984 missense_variant&splice_region_variant p.Ala45Pro
T/C 27186000 upstream_gene_variant
T/A 27186018 upstream_gene_variant
C/T 27186066 upstream_gene_variant
T/G 27186261 upstream_gene_variant
A/T 27186335 upstream_gene_variant
C/T 27186344 upstream_gene_variant
T/C 27186345 upstream_gene_variant
T/C 27186498 stop_lost p.Ter131Glnext*?
A/T 27186519 missense_variant p.Thr138Ser
G/T 27186571 missense_variant p.Arg155Ile
G/C 27186619 missense_variant p.Arg171Pro
A/G 27186623 synonymous_variant p.Pro172Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25782.1
MVRTPSSDNSGLRKGAWSPDEDTKLVAYITRYGHWNWSQLPRFAGLARSGKSCRLRWMNYLRPNVKRGNFTPQEEECIIRIHAERGNKWSAIAAELPGRTDLEVKNHWHTTLKKRSQEESLAIEETRASKSLKNKESMDLVPNCNGAAVPFSATSQITNSSSPLFSFSSLSSSSKEFSSGPCFP*


CDS Sequence:
>Vu_25782.1
ATGGTGAGAACCCCATCTTCTGACAACAGTGGACTGAGGAAGGGTGCTTGGTCTCCCGACGAAGATACGAAATTAGTTGCCTATATTACTAGATATGGTCACTGGAATTGGAGCCAACTTCCCAGGTTTGCAGGTCTGGCAAGAAGTGGGAAAAGTTGTAGATTGAGATGGATGAATTATCTGAGGCCTAACGTCAAAAGAGGGAACTTCACTCCACAAGAAGAAGAATGCATCATCAGAATACACGCAGAACGTGGTAACAAATGGTCTGCTATTGCGGCTGAGTTACCAGGAAGAACAGATTTGGAAGTAAAAAACCATTGGCACACCACCCTCAAGAAAAGGTCTCAAGAAGAATCACTCGCGATAGAAGAAACTAGAGCTTCCAAATCATTAAAGAATAAGGAATCCATGGACTTGGTTCCCAACTGTAATGGTGCTGCTGTTCCTTTTTCTGCTACTTCCCAGATTACAAATAGTTCATCACCCTTATTCTCATTCTCGTCACTGTCATCGTCCAGCAAGGAGTTTTCCTCAGGGCCATGTTTCCCTTGA


Promoter Sequence:
>Vu_25782::LG6:27183852-27185852(+)
AGTCATTTAACTTCTTCTTACTATTGATTTTAGATTATGGGATAAACTTATTTTACTTTTGCTTATTTTTATAAACTCTCTCAAAACTTAAAAAAAATCTTAGATTAAATGGAAGCTTAAATAAGCTCAAAATAAGTATAACATCTTTAACCATTTTCTGTTTGCTGCAGGATAGTCAATAAGTACTAATAATGCCTTATGTGAAAATTAAATTGCTCTTATCTCTTTGTCACTCTGTTTTATTGATCATATATCTTCTATTGAAAGGGACTAAATTATTGGTTATAAACTAATGGTGGTGTTGTTATGGTATATGATTGCAGGTATACAGTGTATTAAAATAATGTTGAAGTGGTATTAAAATATCGTGTAAAATATAGCTTTCTTTCTATGTTATGTATGAATTGATCAAGTGGATGAATCCTTCCCCGTGAACATGTTTTCTGTTTTCGCCTCAGATATTTTTGCTGCCAATATTGCTGATAGGAAAGGGGAAATATTTCACCCAACACCTTTTGATTTTTAAGGTTATTGAGATGCTCTATGTAACAATAATTTTTGTTATTGTGACTGATATTAAGTTAATTATATTAAGTTAACTAATAAGCTGCATTTAATTTTATTTAACAATTGTAATTAAATTTTGTTGCAGGTCGTGGCTGTGGCAGGGGTGGATATCGTGGAAGGGGTTGTGGCTTTAGATCAAATAGACCAATCCAAGCAGCTGAGGGCATTTTCTTCTTACATTTTTATGTAGATGTTTAGTTTTGAGATTGCTGCCACATAAGGCACTCTTTGTTTTAGACCTTAGTCAATTATACTTCTGTTTTGGCCCTGAATCTCATTCTTTAATTTTTATTTTATAAAGAAGTGTTTAAATTCATGCATTTTTCTTCTCTGATATATTTTTTCTTGTCTTTTAAAAAATATAATGTTCCAAGGGTGTGTGTTTTGATTTACCTGGACGATTTTCTTAGTTTGCCTCTGTCCTTTGGTCGTTACCGAAGGCTTTTGCCCTTCGGTAATTAGCAAAGGCTTTCGCCCTTCGGTAATTACCGAAGGCTTTCGGCCTTTGGTAATTACCGAAGGGCGGAAGCCCTCGGTAAATGTTAGCGACAAGGATTTATCGAGGGTTCTTTGGTCGTTGATAAGCCGTCTGTAATTATCTTTTATTGACGATTTTGGACTGTTTCTGAGGACTCCTGACCTTCGGTAATGCACATGCCTTTCTTTTTTGTAGTGAAAGTTTCAAACAACTAAAAAAATAGGTCTGAATCATATATTTAAAATTTTCACTTTTTAAATTGATTGAAGTCTCAACCAATATAAATCTGAATCATATATATTAAATTTTGTTTCTCAAATAAATTTTTAAACTGGTTTCAATTGATTTTGAAATCAATTTAAAAAGTTTAATACTTACTGTATTCTATATCGATTTTAAAACAAATTTAAAAGATCTATTTTAATTGATTTAAAAAGACTTTTCTACCGTAGTATTTTTTTAGGTCATTATTATTATTATTTTCTTCTTAACAAAACATAGCAACATCATCAGACTAATAATATCTTTTTCTTATTCAGCCGAATCACCGATATGTCTTGCTGTCAATTTGATCACATACTTGAATCATAAACAGTTTAACAATCCGAAAGCGCAAGTTGGATGAGACCATGTTCCTGGAAGATGCTATCGCTATTGACTTGCTACCATGACACATATACCTAATGCCACTATCTCCCCATATTATATTACAATGTGAAAGGAAGACTATAGAAACATAGTTTTTGACCTTGTAGAGAACGACTAGAATCTGCTAAGAAGGACCCTTATTCTGAACTCACACCAATATCTGAATTCATTATGAATAAAAAATATGCGTTTTGGACATGAACACCTCCACCGTGTAAAATAAATTACTGGTCAGACACAGAATCCATACACACCTTTGCTTACTACCACAATTCTACTATCATCTTGCAACTGTTTCTTACAAAGA


Gene Sequence:
>Vu_25782(+)
ATGGTGAGAACCCCATCTTCTGACAACAGTGGACTGAGGAAGGGTGCTTGGTCTCCCGACGAAGATACGAAATTAGTTGCCTATATTACTAGATATGGTCACTGGAATTGGAGCCAACTTCCCAGGTTTGCAGGTAAATATTTTAACATTTTGTGAAAACTAAATATGCCAATAAATTTTAGTGAGTATTTATAGTAAAATATTTCTTCATTACCTTTTGCATTGATTTTTAGGTCTGGCAAGAAGTGGGAAAAGTTGTAGATTGAGATGGATGAATTATCTGAGGCCTAACGTCAAAAGAGGGAACTTCACTCCACAAGAAGAAGAATGCATCATCAGAATACACGCAGAACGTGGTAACAAGTATGTATCATCACTTCCTTATGCTGTAATACAATGAAATCTCCCCTCATATCAAAATACCCACCATTCAAAATGGTGTTACAAGTTCTTGTTCAATAACGTGAATATTGAAAACACGTAAATGTTTAACTTTATGATTCCATCGCTTGCAGATGGTCTGCTATTGCGGCTGAGTTACCAGGAAGAACAGATTTGGAAGTAAAAAACCATTGGCACACCACCCTCAAGAAAAGGTCTCAAGAAGAATCACTCGCGATAGAAGAAACTAGAGCTTCCAAATCATTAAAGAATAAGGAATCCATGGACTTGGTTCCCAACTGTAATGGTGCTGCTGTTCCTTTTTCTGCTACTTCCCAGATTACAAATAGTTCATCACCCTTATTCTCATTCTCGTCACTGTCATCGTCCAGCAAGGAGTTTTCCTCAGGGCCATGTTTCCCTTGA