Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25780 LG6 27180393 27181180 PREDICTED: myb-related protein Myb4-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/C 27180451 missense_variant p.Glu20Ala
A/T 27180455 missense_variant p.Glu21Asp
A/T 27180509 missense_variant p.Gln39His
T/C 27180546 downstream_gene_variant
G/A 27180568 downstream_gene_variant
G/C 27180574 downstream_gene_variant
T/A 27180610 downstream_gene_variant
T/G 27180613 downstream_gene_variant
G/A 27180643 missense_variant p.Glu50Lys
A/G 27180655 missense_variant p.Ile54Val
G/A 27180682 missense_variant p.Glu63Lys
G/A 27180695 missense_variant p.Ser67Asn
A/C 27180698 missense_variant p.Glu68Ala
G/A 27180705 synonymous_variant p.Gln70Gln
A/G 27180740 missense_variant p.His82Arg
G/A 27180745 missense_variant p.Ala84Thr
C/T 27180820 downstream_gene_variant
G/T 27180842 downstream_gene_variant
C/T 27180848 downstream_gene_variant
T/A 27180864 upstream_gene_variant
G/T 27180877 upstream_gene_variant
G/A 27180878 upstream_gene_variant
A/T 27180879 upstream_gene_variant
A/C 27180937 missense_variant p.Gln96Pro
A/G 27181040 synonymous_variant p.Gln130Gln
A/G 27181041 missense_variant p.Lys131Glu
A/G 27181042 missense_variant p.Lys131Arg
C/A 27181070 missense_variant p.Phe140Leu
A/G 27181162 missense_variant p.Gln171Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25780.1
MVKTPSCDKSGPGKDTWTPEEDRKLIAYVTRYGFWNWRQLPRFAGLARCGKSCRLRWMNHLRPKIKRANFSSEEEEYIIRMHTKLGNRWSAIAAELPGRTDVEVKNHWQTTLKKRSQEEALAKEETTSKSSKNKESTSNGVHVPFPASSQNSNDSADISFSSLSSSSDEYSSGPCFP*


CDS Sequence:
>Vu_25780.1
ATGGTGAAAACCCCATCTTGTGACAAAAGTGGACCGGGGAAGGATACTTGGACTCCGGAGGAAGATAGAAAATTAATTGCCTATGTCACCAGATATGGTTTCTGGAATTGGAGACAACTTCCCAGGTTTGCAGGTCTGGCAAGGTGTGGGAAAAGTTGTAGATTGAGATGGATGAATCATCTGAGGCCGAAAATCAAAAGAGCGAACTTCAGTTCAGAAGAAGAAGAATACATCATCAGAATGCACACAAAGCTTGGTAACAGATGGTCTGCTATTGCGGCTGAGTTACCAGGAAGAACAGATGTGGAAGTAAAAAACCATTGGCAGACCACTCTCAAGAAAAGGTCTCAAGAAGAAGCACTCGCGAAAGAAGAAACTACTTCAAAATCATCAAAAAATAAAGAATCCACGAGTAATGGTGTTCATGTTCCTTTTCCTGCTTCTTCCCAGAATTCAAATGATTCTGCAGACATATCATTCTCGTCACTTTCATCCTCCAGCGACGAGTATTCCTCAGGGCCCTGTTTCCCTTAA


Promoter Sequence:
>Vu_25780::LG6:27178393-27180393(+)
TGAGAACTAGGCAAGGACCCAGGTTCGGTTTTGGGTTGAAATGCTATAAGAGATCCAAAAGACGCAAGCTTTTCTTATGAGAAAACTAGCAAAGGGAGAAGGTGTTACTACACTACTTAAAGACACGAGAAAAACTGCACCAAAACACAACGAAAACTCATTTTAATCGGTTCAAATGGAAGATAATCCATCAAAGACTAATTTAATCGGAGTAAAAGTAAGTTTAAACGGTTCAAAAGAGATAAAACGGACTTGGAAATGCAATGTCGCGGAGAGAAAAGGCGAGGAGAAAGATGATGAAATTCTTGTAACCACGGGTTCGCAATTTCTGATTTAACAGGAATCAAGACGTCGGTGCCCCAGTGCCCGACGTCTATTCTCGACTAGACGTCGGGGACCTCACTAATATGACGTCCATTCGATTTAAAAATTAATATTCGCGGTGTATATAAACATCAGAGGTAAGGGGAGTCGACGTCCAAAACAACTTTTCACCTACCCTGTCAGGCCATTTAGGCGTCGGATGTAAAGGGGACCGACGTCTCAATGACTATTTAGACGTTGGTTATGCACCTGTAACCGACGTCTAGACGTCGGCCCCCCATGAACCGACATCGCCAAGGCCAACTTATTTACCAAAATGCCACCGATAAATTATTTTACATTGGATATTGTGTGATCCGACGTTTAAGGAGTGACGTTAAATGTCATTTCTACTGGTGAATGAGTAATTTTGTATGATATAAGGTGATTTTTTCTTCTCATTCCAGTGAGAGAGTTTTTTTAACATCTCTCATAAATTCATGCTCGTTTTTTTCTTCAAATCGTGTGAATCAAACGAGAGTTGCATTCACTTTTTTATAGTTGAGCGCAGTAAATTATTGGAAATAAACAGAAGCTAACTTTCACAAACCACCACACCCTCCTTCACCAATACTTGTCGGAGTAATCTCTCCATGTTACAGCAACTCCTACAAATCACCGTCTCCTGAAGGACACCTTTCAAATAAAACTCACAAGAGTAAAATTGGAATTCCAAAAACGGAGAGGATGCTGATAGAAATTGATGGCGGTGCAGGAAGCAATTTTTCCGATTGATGCTTAATTGAGCCTTATGAGAATATGGGTTTTTTCTTCAGTTCTTTTTGTGGTTTACTTTTTGGGAGGGTTATTTCGTGGGTAGCCCAAACCCAAAACATTGGACATGAATGAGAGTGATTTGGGAGGAATTTATTGAATAAACAGATGATATTAGACCTAAACATATACTAGTTGCTTATTCTTGCTTAAAAAAAAAAGAAACTAGTTTGGTTATTCAATAGACGAGAATTCATTTCATAATCTAATATTATTTGGATTAGGTTAGTAGGGTTCCTAGGTTGAATTGGATCCATGATCCTCTCTAATCGTTTGCCAGTCTTCAGAAATGTGGATTAACATATAACCAGTTAGGTCTTCGAAACAATTAAATTTAAAAGCTTGTTTGGATTTTAGCTAAAACCTACAAATCATGACGACAAAACCTTTGTTCCTGGAAGATGCAATTGCCATTTACTTGCTACCATGAAACAGGTACATAATGTCACTATCTCCAATATTATATTATAATGTGAAAGGAAATTAGAAACACACTTTTTGACCTTTTAGAGAACAATTAGAACCTGCTAGGGAGGTGTCTTATTCTGAATTCACACCAAACTTTGAATTCACTTATGAAGTGAAATGCTTTTTTGATGTTAACACCTTATAGCAAAAATAATCGTAAATAAATATCCACAGATAAAATTTGTGATAAATAATTAATGTAAATGAGTAAGATGTTTATCATATTATACTATTGGCATCCCAATCTTCACTCTATAAAATAAATACAGGTCAGACACAGAAACCACTACACACCCTTGCAACCAAAACCCTAATATCATCTTTGCAGTAAAACTCAAACACCATCTCAGTCAGTCACTCACTCGAAATTCAAGTGCACCTGTTTCTCACAAAGA


Gene Sequence:
>Vu_25780(+)
ATGGTGAAAACCCCATCTTGTGACAAAAGTGGACCGGGGAAGGATACTTGGACTCCGGAGGAAGATAGAAAATTAATTGCCTATGTCACCAGATATGGTTTCTGGAATTGGAGACAACTTCCCAGGTTTGCAGGTACATATATTCAACACTTATGAAAGCTAAATAAGCCAATAAGTTTTAGTCAGGATTTTATAGTAAAAAATTCATTCATTACCTTTCTCATTGATTTTTAGGTCTGGCAAGGTGTGGGAAAAGTTGTAGATTGAGATGGATGAATCATCTGAGGCCGAAAATCAAAAGAGCGAACTTCAGTTCAGAAGAAGAAGAATACATCATCAGAATGCACACAAAGCTTGGTAACAGGTATCTGTCATCATCACTTCCTTATGCTTCAATACAATGAAATCTACCCTCATATCAAAATACCGATCGTTCAAAATAGTGTACAGGTTCTCGTTCAATAACGTGAATATTGAAAACACGGGAATGTTAATCTTATGATTCCATTGCTTGCAGATGGTCTGCTATTGCGGCTGAGTTACCAGGAAGAACAGATGTGGAAGTAAAAAACCATTGGCAGACCACTCTCAAGAAAAGGTCTCAAGAAGAAGCACTCGCGAAAGAAGAAACTACTTCAAAATCATCAAAAAATAAAGAATCCACGAGTAATGGTGTTCATGTTCCTTTTCCTGCTTCTTCCCAGAATTCAAATGATTCTGCAGACATATCATTCTCGTCACTTTCATCCTCCAGCGACGAGTATTCCTCAGGGCCCTGTTTCCCTTAA