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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25769 LG6 27065819 27067179 PREDICTED: myb-related protein Myb4-like
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Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
T/C 27066110 stop_lost p.Ter91Trpext*?
C/T 27066340 intron_variant
A/G 27066381 intron_variant
C/T 27066480 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25769.1
MVRTPYCDNNGLRKGTWTPEEDWKLISYVTTHGHKNWRQLPKWSVIASHLPGRSDNEIKNHWHAHLKKRFQHNSETNEKVEASTSKQHSLVESIQEESGEVVASSFQNSCQATSQTPDSDSQSPQHTSLRDALCMISELEHEAASNGNLATDNFADFMEQNTDPISAYSWEELYEISYLCEFLAPSY*


CDS Sequence:
>Vu_25769.1
ATGGTGAGAACCCCTTACTGTGACAATAATGGACTGAGAAAAGGAACATGGACACCAGAAGAAGATTGGAAGTTGATTTCTTATGTCACTACACATGGCCACAAGAATTGGCGCCAATTGCCTAAGTGGTCAGTGATTGCCTCCCACTTACCTGGAAGATCAGATAACGAGATAAAAAATCACTGGCATGCACATCTTAAGAAGCGCTTTCAACACAATTCAGAAACAAATGAAAAAGTTGAAGCTTCCACCTCAAAACAGCACTCCCTAGTAGAATCAATTCAAGAGGAATCTGGTGAAGTTGTTGCAAGCAGTTTCCAGAACAGTTGCCAAGCTACTTCCCAAACTCCTGACAGTGATTCTCAATCGCCCCAGCACACATCATTGAGAGATGCTTTGTGCATGATATCTGAACTTGAACATGAAGCAGCCAGTAACGGGAATTTGGCTACTGATAACTTTGCTGACTTTATGGAGCAAAACACAGATCCTATCAGTGCATATTCTTGGGAAGAACTTTATGAAATTTCATATTTATGTGAATTTCTCGCTCCTTCGTACTGA


Promoter Sequence:
>Vu_25769::LG6:27067179-27069179(-)
TGTTGATTTAAACACAATCATATTATATTGTGGAAGTGACCTCACTTGAGTTTGGAAGTAAGTGTTTAGTACATCGGAGCGCGTATAATTCCGAAAGTTAATTATTTAATTGCTCTTAATTCCTGCTTCCTTGTTGCAGAAATTTACAAGGATTTTGTTCTTTGAAAATTGATAATATTAAAATGAAAACAGAAGAAAAAAGTATTATGTTAAAGAAGAAAAAAGTATGTCAAAATCTGATTAAATGCAAACCAAAACCAACATGCATCCAACGAAACCCTCTTGATTAGGGTTACAAGCTGGGCGATTCACAAGTTAATTTCCTCTGATTGAGAATGAAGAGTGAAAAGGAGAACATACTAGTTCCACAAACCAGGATGTTTTCACACTTTCAGTAGTCAAAGCCCATAAAATAAGAAGACTTCCGATATATAAAGACTATTTTTCAACTAATGGAAAAGAATATTAACTTATATATATTGAAATTAAATTTATCATATATATATATATATATATATATATATACATAAATGTATAAAAATTCTCAACATGTAGTATGCTGTTTACAGCTATAAATTTGACTCCACAATATTTAAACTTTATTAGCACATATTATACCGATCGATATAATAAAGATGGCATGCTTTTGTTACATGATTTAGGTGTATAGTTTTGTCATCAGTTTTAAAATTCTCATTTTACAAATCCAATAAATAAAAAAATTATTTTATACAAGAATCAGTTTTTTTCTGTCAGTTATTATCATAGTATTTCTTTCTCTGTTTAAAAAGAAAGTGTTTGTTTTTTAAGCACAATTTTATGTTATTTCTAGATAATTTTATCCCTTCTTTTGCATATATATAATTTTTTGTTATTTCTAGATAAGAAATTTTAGATTTCCACTTATTCCTCCTCTCTTCTTCCTAAGCACAATTTCAATTGTTTCATGCGACTAAAGAATAATCTAGATGCACGGAATTCATTAGTTTTTGTGTTATTACTATAAAAATTTATATTATAATTATTATAAGATACTGCAATCTATCCAAAACCTTTTAGTTGACTATGATACGCGATTTTATTGAAATCTAATCCACTGGAAGCGAGGAAGAACATTCAACTAAGTGGTTGGGTAACGACCCCTTCGAACCAAGGAAGGTGGCTTCAAGTTTCCAATTATACGACAAAACTTGGGTCGCTATTTCGCAATTTGATTCATTCCAGGTTTCATTTCGTAGTATACTTTATTTAAGGGTCGTCATCACCATTGCATTAAGAACACTTATGCAGAAATTTAAAAATTATTTTTTTATTAAAAATCATATAAATTTTTTATAAAAAAGGTATTCTCCTATTTTCCTATATTCTAAGTTTTCTTGATTTTACTAAAATAGTTTTGATTTTTTTATTTTACCTTTTTCATTTCCACATCACGTAAAAAAATTCGCAAAAGAATAATGAATACAATCTTGAATTTTTATTATAGAGAAGAAGAAAGATTCCATTAGTGCAGTAATTAAAAAGCATTATTTCCATGAAAATTTTCTATTTTAATATTTGAACTGCTACCTCTTTCTGAACGACAACCGTGTAAGGTTTTTTCACACGGACTAAGAAAAATGTTAGATGTCACTTATTCTGTTGAATATCTCAACCCCAACTGTACGAAATGGAAGCTGGATGTGTTTTGTTTGAGTGTAAATTAGAATTAAAATAATCAAAATTTGACTACAAATTGCAGTTATAGTAATATTTTAAGACCATGGTTACCAATTTTCTTAGTTTATTAGCATGAAAACATTCATGTATGCCTCATTCTTCCCTGCACGCATTCTCATGGTATATAAAGGTAAAGTGTCTTGCTGCAAGTGTCTTTCGCCAAACTCTCTTCTTTCTCGAGTGTCTCTCTCTCACACACAAACCCACACAGAATCAACAACGATACCTTCAGAGTGTTGTTACATATATAGTGTGAGAGAGAGTTTGATAGGTTGAGAAAG


Gene Sequence:
>Vu_25769(-)
ATGGTGAGAACCCCTTACTGTGACAATAATGGACTGAGAAAAGGAACATGGACACCAGAAGAAGATTGGAAGTTGATTTCTTATGTCACTACACATGGCCACAAGAATTGGCGCCAATTGCCTAAGTTTGCTGGTAATACAACTGCATCAGTTATCTACCTTCGGGAATGAATACTAATTTCATGTTAAGTTTTCACATCTGTGTGGGAAGTTTAAACTGATGGTTAATTAAATTTTAAACTGTTGTTTTTGAAACATTTAGATCATATGAGTTGAATCAAGACTTGGTACAGAAAAGCTATCTGTTTGCTTCTCTTTTTCTAAATAGATAAACAACTTCATATCACTCTCTTTTTTCGAAAAAAGACATGATCCATGGCGTATTTATCTTAATTTGATTCTTGTTTTAAACTGTGAGGGGAATTTAAAAACTCTACTTGTCTCCAGAATCTCAACATATTCATCCTTAGGCCAGGCACCAAAAAGGGAAAATTGAGTTCATATTCTACTGTTTGGATTCAATATAATTGTGCAGCATGTTTTCAGGTCTTTCTAGGTGTGGAAAGAGCTGCAGATTGAGGTGGATGAATTACTTAAGGCCAGGCATCAAAAGAGGGAACTACACTTACGAAGAAGAAGAGATAATTATCAAACTGCACCAAATTCATGGAAATAGGTATACGCACAGCAAGATTACATGATTGTTACATGAGTTTAATTTCTATTCACCTTTAAACTGATAAAAGGTCATGCTGCATATGACTTTTCAGAGGATTATCATAAATATCAATCGATTAATTTGTCATATATGATATGTGATGCACTTATAGTATTACTTGGACTTTTGCGCAAGTTACATCATATAATTTCTTTCACTGCATGTGAATATAAACCATAGTGTTTATTTATTTCAACTCCCTAGGTGGTCAGTGATTGCCTCCCACTTACCTGGAAGATCAGATAACGAGATAAAAAATCACTGGCATGCACATCTTAAGAAGCGCTTTCAACACAATTCAGAAACAAATGAAAAAGTTGAAGCTTCCACCTCAAAACAGCACTCCCTAGTAGAATCAATTCAAGAGGAATCTGGTGAAGTTGTTGCAAGCAGTTTCCAGAACAGTTGCCAAGCTACTTCCCAAACTCCTGACAGTGATTCTCAATCGCCCCAGCACACATCATTGAGAGATGCTTTGTGCATGATATCTGAACTTGAACATGAAGCAGCCAGTAACGGGAATTTGGCTACTGATAACTTTGCTGACTTTATGGAGCAAAACACAGATCCTATCAGTGCATATTCTTGGGAAGAACTTTATGAAATTTCATATTTATGTGAATTTCTCGCTCCTTCGTACTGA

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