Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25756 LG6 26837649 26838978 PREDICTED: transcription factor MYB34-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 26837824 intron_variant
T/A 26837826 intron_variant
T/C 26837882 intron_variant
C/G 26837924 intron_variant
G/T 26837945 intron_variant
T/G 26837972 intron_variant
G/T 26838451 stop_lost p.Ter132Tyrext*?
G/T 26838456 missense_variant p.Cys134Phe
T/A 26838487 synonymous_variant p.Pro144Pro
C/A 26838564 missense_variant p.Pro170His
G/A 26838611 missense_variant p.Ala186Thr
C/G 26838835 synonymous_variant p.Val260Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25756.1
MGRAPCCDKNGLKKGPWTPEEDLKLIKYIQTHGPGNWRSLPKSAGLQRCGKSCRLRWTNYLRPDIKRGRFSLEEEDTIIQLHSIMGNKWSSIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDMSSILRTVLNPSLNMQGFLGGAQVLINQGLLNLAATASLLENQNLASHNYVQSQVAQPLDITQLQSLEGFSGTVENFSCSNSPSGDENLVLQQNQVDLLGNHVFAHSMKNAELKKGYDSAMPTPESSPNQLNSSSNYLRSGGEEEKNSFCSDLFEFDIPEGLDIADIFCTVPEC*


CDS Sequence:
>Vu_25756.1
ATGGGAAGAGCTCCTTGCTGTGACAAGAATGGACTCAAGAAGGGTCCATGGACACCAGAAGAAGACCTTAAACTCATCAAGTACATTCAGACTCATGGACCAGGCAATTGGAGATCCCTACCTAAAAGTGCTGGTCTACAAAGGTGTGGCAAGAGTTGCCGCCTTCGATGGACAAATTACCTTAGACCTGATATTAAGAGAGGAAGATTCTCCTTAGAAGAAGAAGATACGATTATTCAGTTGCACAGTATCATGGGAAACAAATGGTCATCTATAGCAGCTAGGTTGCCAGGAAGAACTGACAATGAAATAAAGAACTATTGGAACACACACATTAGGAAGAGGCTTCTTCGTATGGGAATTGATCCAGTTACACATGCCCCACGCCTTGACCTGCTAGACATGTCATCTATTTTAAGGACAGTGTTGAATCCCTCCCTTAACATGCAAGGCTTCTTAGGAGGAGCTCAAGTTTTGATCAACCAAGGCTTGTTAAACCTTGCTGCTACAGCCTCTCTTCTAGAGAATCAAAATTTGGCTTCACACAATTACGTACAAAGCCAAGTTGCTCAACCACTGGACATAACTCAGCTTCAAAGTTTGGAAGGATTCTCTGGCACCGTGGAAAACTTTAGCTGCTCAAATTCTCCTTCGGGTGATGAGAACCTTGTTTTGCAACAAAACCAAGTTGATTTGTTAGGTAACCATGTTTTTGCGCATTCCATGAAAAATGCAGAGCTGAAAAAGGGGTATGACTCGGCTATGCCTACGCCTGAGTCAAGTCCAAACCAGTTGAATTCATCATCCAACTATTTGAGAAGTGGCGGGGAGGAAGAGAAGAATAGTTTTTGCAGTGACTTGTTCGAATTTGATATTCCAGAGGGTTTAGACATTGCTGATATTTTTTGTACTGTCCCAGAGTGTTAA


Promoter Sequence:
>Vu_25756::LG6:26835649-26837649(+)
GAATTGGATCAATAGAGTGGAAAAGTTCTTTGAACTACAAGGAGTATCGGAGGAAGAAAAGTTGTGCCTATCTTATATCAGCATGGAGGGAGTTGCTAGACACTGGTTCAGTTTCTGGAGAGAGAAGGCCAGGGACAGTTCATGGGGAGGATTGAAGGAGGCGATGGTGAACCGATTTGGAGGAAGGAGTCGGGGAACAGTCTTCGAGAGGTTGGCGGCCTATAAACAAGCAGGCACCGTGGAAGAGTATATCCAAGGTTTTGAAATCTTGGTCGGCCAAACGAAAGCAATACCCGAAGCACAACTGATGGGGTATTTTATGGCAGGCTCACAGGAGGGGATCCGTATCCGAAGGAGTTGATGGTCACCATGAGAATTGCAAGGGATGCCAAGGAGGCCCAGGGCAGGACAAAGGATGAGAATTGGAGTGTGACAAAGAACCCGTCACCTTTGGAACGAACGAACGGTGAGGAGACACGACCTGGAGTAAATCGTTACAACCCAGGCCGATTGCGGTCTGAAGTCAATCACTATAACTCAGGCCGATCCGGAGTCGCCGAGAGTGTGGGGTCCGTACGGAAGGAAGGTAGTGATAATAATGGGAGAAACACCAGGAATATGCCTTATTCAGAAGCCATAAAACGAAGAGAAGAGGGAAGGTGTATCAGGTGTGAGGGACCGTTTGGTCCTTGTCACCACTGCCTGGACAGGAGTTTGAGAGTCCTGATATTGGCAGAGGACGAGGAGGAATTTCCACCACCCAAACCTCCAGACCTGAATTGATAAGGAGCCATGAGATCAAGCTCCCCCAATCCAACCTTGGGGACAAGGTTGTTTTGCAGCAGGGTGTAATGTTAGGGTATAAGGTGGGAGGTAATAAGAAGGAGAAGAAACATAGGAGGGAAGTGAGGCAGAACGATATTGACCGTAAAGGCCGAACGGTGGAAGGCATAGAGAGGTTAGGCCGAACGGTAGACAACAAGAAGCGACCAGGCCGAACGGTGGGAAGCAGAGAGAATATTCCGTATAAGTTAATTAGAGTAAATAAATATATATTCAAGGAAATATTCAATATAAGATATTTATAATTAAGGATATACGCTACGATAATATATAGGGAGATATTTATATTAAATATGGGAATATTTATATTAAGTGCAGATATATTCTAGGGAATATTTATATTAAATGCAGATATATTCTAGGGAAATATTTAATAAGAGATGTGCGGAAAATAATTAGTATAAATAAAGTTAGAGTCTAGGGTTAAAGGTATGCTTTTGATTATTGAGTTTTCTGACACACATTATTATCTTGTGAGGAAGGTTATGCTCTCAAAGTAATTGAAAGAGGTTATGTTCCCAATTATTGTTTACCCTTGTTGATATTACCATCAATAAAAGATATTCATTCATCTATTGTCATTCGTTTATTATTTTGTTACGAGTGAGAGAGTGAGAAAGGTTGTATTTGGCTAGTTTAGTTACTCAGGTACCTAACAGTGTGTATGCTACCTCTTTAATTTTTTAGAAAATGAACTTTTGTTAATCTGCTAAAAATGTGATTCATAATTCTACTTCTACCATGTTAATCTCCTTTTGGTTTCAAGTCCAATGCAACGATGTAATGGTTAGATTAATAGATAAGACATTGTTTTTGTCAAGATATCAAACACATGACGTATATAAACCGTGTATGCAATTTACTGTATGTATAATACACGTATATATATTATAACACATACATAATGCATTGATGAGTATCTTCGCTGAGCCTGAGAGAGACATGTGTCAAATGGTCGGCGCCAAATCCTTTTGACTTTGAACATCTTACACTGCTTTCCTCAGCTATAAAAGCATTGTCGTCTCAGCCATCACCACAAGCAACAGAACTTCACTTTCTGTGTCTTTTTGTGGCAAGAAATATTAAGTTTTCTACCCTTTTGGCTTATTGGAACCTTCCTGCACCGTACTCCACTTTTCATCTATATACTTTGAAAA


Gene Sequence:
>Vu_25756(+)
ATGGGAAGAGCTCCTTGCTGTGACAAGAATGGACTCAAGAAGGGTCCATGGACACCAGAAGAAGACCTTAAACTCATCAAGTACATTCAGACTCATGGACCAGGCAATTGGAGATCCCTACCTAAAAGTGCTGGTTTGTTATTTCCTTCTCCCTCCCTTTTCATTAGCATTTACCAATAACACATTGTTTTGTTATAGGAAAGATTAGTCATACTAACTTAGAAGATATCATTTTTGTTTCGAAAAGATGTAAATGTTGTAATATATATCAAATTCTCCTAACAAAATATTGCTTGGGTTGACCTTGAGTTTGAGAAACACCATTTTTGTTTATACTAACATGTTTTCAACACATACACGGTTTTCTTGTTCTATCTACTCGATTGTTACTATTCACTAACACATACATTTGACCAGGTCTACAAAGGTGTGGCAAGAGTTGCCGCCTTCGATGGACAAATTACCTTAGACCTGATATTAAGAGAGGAAGATTCTCCTTAGAAGAAGAAGATACGATTATTCAGTTGCACAGTATCATGGGAAACAAGTAAGAACTATCTACGACCATTTTCCTTCATATATATCAGGATCTGTCTAATAAGCTTCAATATTATAGATTGGTACGAGTTTCTGATCAATAATATGGTTAATTTCTGGTTTACTTAGATGGTCATCTATAGCAGCTAGGTTGCCAGGAAGAACTGACAATGAAATAAAGAACTATTGGAACACACACATTAGGAAGAGGCTTCTTCGTATGGGAATTGATCCAGTTACACATGCCCCACGCCTTGACCTGCTAGACATGTCATCTATTTTAAGGACAGTGTTGAATCCCTCCCTTAACATGCAAGGCTTCTTAGGAGGAGCTCAAGTTTTGATCAACCAAGGCTTGTTAAACCTTGCTGCTACAGCCTCTCTTCTAGAGAATCAAAATTTGGCTTCACACAATTACGTACAAAGCCAAGTTGCTCAACCACTGGACATAACTCAGCTTCAAAGTTTGGAAGGATTCTCTGGCACCGTGGAAAACTTTAGCTGCTCAAATTCTCCTTCGGGTGATGAGAACCTTGTTTTGCAACAAAACCAAGTTGATTTGTTAGGTAACCATGTTTTTGCGCATTCCATGAAAAATGCAGAGCTGAAAAAGGGGTATGACTCGGCTATGCCTACGCCTGAGTCAAGTCCAAACCAGTTGAATTCATCATCCAACTATTTGAGAAGTGGCGGGGAGGAAGAGAAGAATAGTTTTTGCAGTGACTTGTTCGAATTTGATATTCCAGAGGGTTTAGACATTGCTGATATTTTTTGTACTGTCCCAGAGTGTTAA