Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25680 LG6 25672497 25675249 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 25672553 missense_variant p.Asp836Tyr
A/T 25672564 missense_variant p.Val832Glu
T/C 25672567 missense_variant p.Asp831Gly
T/G 25672593 synonymous_variant p.Val822Val
A/G 25672607 missense_variant p.Tyr818His
G/T 25672647 synonymous_variant p.Gly804Gly
C/A 25672650 synonymous_variant p.Arg803Arg
T/G 25672726 missense_variant p.Tyr778Ser
G/C,A 25672868 missense_variant p.Leu731Phe
C/G 25672871 missense_variant p.Glu730Gln
G/C 25672878 missense_variant p.Phe727Leu
A/G 25672880 missense_variant p.Phe727Leu
G/A 25672930 missense_variant p.Ser710Phe
C/G 25672963 missense_variant p.Trp699Ser
A/C 25672964 missense_variant p.Trp699Gly
T/C 25672965 synonymous_variant p.Ser698Ser
T/A 25672975 missense_variant p.Lys695Ile
A/C 25673078 missense_variant p.Phe661Val
G/C 25673080 missense_variant p.Thr660Ser
A/G 25673083 missense_variant p.Met659Thr
A/C 25673131 missense_variant p.Met643Arg
C/T 25673156 missense_variant p.Glu635Lys
G/T 25673162 missense_variant p.Pro633Thr
T/C 25673168 missense_variant p.Lys631Glu
A/G 25673186 missense_variant p.Phe625Leu
A/T 25673326 missense_variant p.Phe578Tyr
T/G 25673363 missense_variant p.Ser566Arg
G/A 25673377 missense_variant p.Ala561Val
A/G 25673439 synonymous_variant p.Pro540Pro
T/C 25673486 missense_variant p.Lys525Glu
A/G 25673497 missense_variant p.Phe521Ser
A/G 25673500 missense_variant p.Ile520Thr
T/A 25673502 synonymous_variant p.Ser519Ser
G/A 25673507 missense_variant p.His518Tyr
G/A 25673509 missense_variant p.Ser517Phe
T/C 25673525 missense_variant p.Lys512Glu
C/A 25673533 missense_variant p.Cys509Phe
C/G 25673552 missense_variant p.Glu503Gln
T/A 25673571 missense_variant p.Leu496Phe
G/C 25673608 missense_variant p.Thr484Ser
A/G 25673646 synonymous_variant p.Pro471Pro
C/G 25673682 missense_variant p.Leu459Phe
T/A 25673687 missense_variant p.Ile458Phe
A/G 25673721 synonymous_variant p.Leu446Leu
T/C 25673762 missense_variant p.Lys433Glu
G/T 25673787 synonymous_variant p.Pro424Pro
C/T 25673807 missense_variant p.Glu418Lys
G/A 25673888 intron_variant
T/C 25673912 intron_variant
A/G 25673930 intron_variant
T/C 25673944 synonymous_variant p.Thr403Thr
G/A 25673947 synonymous_variant p.Gly402Gly
T/C 25673956 synonymous_variant p.Leu399Leu
C/T 25673960 missense_variant p.Arg398Gln
T/C 25673963 missense_variant p.Gln397Arg
C/T 25673975 missense_variant p.Gly393Glu
C/G 25673976 missense_variant p.Gly393Arg
C/A 25673978 missense_variant p.Arg392Ile
T/A 25673984 missense_variant p.Lys390Ile
T/C 25673985 missense_variant p.Lys390Glu
A/T 25673990 missense_variant p.Met388Lys
T/C 25673991 missense_variant p.Met388Val
G/A 25674043 synonymous_variant p.His370His
T/A 25674044 missense_variant p.His370Leu
G/T 25674045 missense_variant p.His370Asn
A/T 25674050 missense_variant p.Ile368Asn
T/C 25674051 missense_variant p.Ile368Val
T/C 25674102 missense_variant p.Met351Val
T/A 25674105 missense_variant p.Asn350Tyr
C/T 25674107 missense_variant p.Gly349Glu
A/T 25674119 missense_variant p.Phe345Tyr
T/G 25674127 missense_variant p.Gln342His
G/A 25674144 synonymous_variant p.Leu337Leu
G/A 25674218 splice_region_variant&intron_variant
T/C 25674219 splice_region_variant&intron_variant
T/G 25674235 intron_variant
T/G 25674236 intron_variant
A/T 25674241 intron_variant
G/A 25674251 intron_variant
A/T 25674383 synonymous_variant p.Ser289Ser
A/T 25674401 stop_gained p.Tyr283*
T/A 25674402 missense_variant p.Tyr283Phe
A/G 25674407 synonymous_variant p.Gly281Gly
T/C 25674418 missense_variant p.Met278Val
T/G 25674426 missense_variant p.Asn275Thr
T/C 25674427 missense_variant p.Asn275Asp
A/G 25674436 missense_variant p.Tyr272His
C/T 25674441 missense_variant p.Cys270Tyr
T/C 25674445 missense_variant p.Arg269Gly
T/A 25674474 missense_variant p.His259Leu
T/C 25674536 synonymous_variant p.Glu238Glu
G/A 25674558 missense_variant p.Ala231Val
C/G 25674561 missense_variant p.Cys230Ser
T/C 25674707 synonymous_variant p.Ser181Ser
G/C 25674731 synonymous_variant p.Pro173Pro
C/G 25674742 missense_variant p.Glu170Gln
A/G 25674748 missense_variant p.Tyr168His
C/T 25674760 missense_variant p.Asp164Asn
G/A 25674803 synonymous_variant p.Phe149Phe
G/T 25674853 missense_variant p.Gln133Lys
T/C 25674875 synonymous_variant p.Gly125Gly
A/C 25674933 missense_variant p.Val106Gly
A/G 25674938 synonymous_variant p.Cys104Cys
A/G 25674954 missense_variant p.Ile99Thr
C/T 25674962 synonymous_variant p.Lys96Lys
A/T 25674972 missense_variant p.Phe93Tyr
A/G 25675001 synonymous_variant p.Asn83Asn
C/A 25675022 missense_variant p.Arg76Ser
C/A 25675061 missense_variant p.Glu63Asp
G/T,C 25675065 missense_variant p.Ser62Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25680.1
MGGIGKTTLARALYERIYHQYDFHCFIDDVSKIYRDSSSLGVQKQVLSQSLNEKNLEISNSSEGTCLIWSRLHNVRALVVLDNVDEVEQLRMFTGKRDILLRECLVGGSIIIVVSRDEHILRTHGVDDIYQVQPLNNENAMQLFCRNAFKVNDILSDYEKLAWDVLSYAEGHPLAIEVIGSSLFGRNVSQWESALARLKEKKSKNIMDVLRISFDQLDEEDKEIFLDIACALCHYDEEYVKEVLNFRGFHPEYGLQVLHDKSLILKEDRCIYMHNLLMDLGRYIVKEESPKEPLKRSRLWDYQDFAKAMSNNQTTEILEVVAVNSFASSKTVRVDGLSKIRQLKFLRLGNMNCSGSLSHLSSELGYLIWHNYPFECLPQSFQPHKLVMLKLRGSSIQRLWSGTKVLPNLKLLDLSDSEELVEMPDVAEALNLKEIVLEGCIRLRKLSPSIGLLSKLTILNLKNCENLVSLPNSILGLNSLEYLTVYGCSNLFNELLDEASNTEHLKKLCSVKGPIHSHSIFPLIKKARRESVSCLLPSSPTLPCLRELDLRFCNLVKIPDAIGKLSCLEKLNLKGNNFVTLPNLKDLFRLYYLNLQHCKRLKYLPDLPSRTHLPLNLYSYPMQYFEGFIYKVPNEDECMAGLMMFNCPEIVERERCTSMTFSWMLQMVQVCMFLPYTFLLLISFGVEKQLLTHNKTQSWYNSECLTSLPSLKSLGSIIPGSEIPMWFNNELVSMDNSIIIDVSPFVYDNNWVGVVCCAILSEDLYRTRILEDSRRDLYVEHSDHMCLFYYSRQQFCHEQGIFRGKLNTHDLSLTFRLYDVVVLCANMKDRDVGFYDFEVKKYGYRWVKKQDLQ*


CDS Sequence:
>Vu_25680.1
ATGGGTGGTATAGGAAAGACTACACTTGCTCGAGCTTTATACGAAAGAATCTATCATCAATATGATTTTCATTGTTTTATTGATGATGTAAGCAAAATATATCGAGATTCAAGTTCATTAGGAGTACAAAAGCAGGTACTTTCTCAGTCTCTAAATGAGAAAAATCTAGAGATTTCAAATTCTTCTGAGGGAACATGTTTGATATGGTCTAGGCTGCACAATGTTAGGGCACTTGTAGTTCTGGACAATGTTGATGAAGTTGAACAACTAAGGATGTTTACAGGGAAGAGAGACATTTTGTTGCGTGAATGTTTAGTTGGAGGGAGTATAATCATCGTAGTTTCTAGGGATGAACATATATTGAGGACTCATGGAGTAGATGACATTTATCAAGTCCAGCCGTTGAATAACGAAAATGCTATGCAGCTGTTTTGTAGAAATGCTTTCAAAGTTAATGATATTTTGAGTGATTATGAAAAGTTGGCATGGGATGTACTATCTTATGCTGAGGGCCATCCCTTGGCAATTGAAGTAATTGGGTCATCTTTGTTTGGTCGAAATGTGTCACAATGGGAAAGTGCATTGGCAAGGCTAAAAGAAAAGAAAAGTAAAAATATTATGGATGTTTTGCGTATAAGTTTTGATCAGCTGGATGAAGAAGACAAAGAAATATTTTTGGATATTGCATGTGCCCTATGCCATTATGATGAGGAATATGTGAAGGAAGTTCTAAACTTTCGTGGATTTCATCCTGAATATGGTCTACAAGTTCTGCATGACAAATCACTAATATTAAAAGAGGATAGGTGTATTTATATGCACAACTTGTTGATGGACTTGGGTAGGTATATTGTCAAAGAAGAATCTCCTAAGGAACCCCTAAAGAGGAGTAGGTTGTGGGATTACCAAGATTTTGCCAAAGCTATGTCAAACAATCAGACAACTGAAATTCTTGAAGTCGTAGCTGTTAATTCATTTGCAAGTTCTAAAACTGTGAGGGTAGATGGTCTATCGAAAATTAGACAACTTAAGTTTCTTAGACTTGGGAACATGAACTGTTCAGGAAGTCTCAGTCATCTTTCAAGTGAACTAGGATATCTTATTTGGCACAATTATCCTTTTGAGTGTTTGCCTCAAAGTTTTCAGCCACACAAACTAGTTATGTTAAAATTGAGAGGAAGCAGTATTCAACGACTATGGAGTGGCACAAAGGTGCTACCTAATTTGAAGCTTTTGGATCTCTCTGACTCCGAAGAATTAGTTGAGATGCCCGATGTTGCAGAGGCCCTAAATCTTAAAGAAATAGTTCTTGAAGGATGCATACGGCTCCGAAAACTTAGTCCATCGATTGGTCTTCTGAGCAAGCTTACTATTTTGAATTTGAAAAACTGTGAAAACTTAGTAAGCTTACCTAATAGCATATTGGGCCTGAATTCTCTTGAATATCTGACTGTCTATGGTTGTTCAAATCTGTTTAATGAGTTATTAGATGAAGCAAGTAACACAGAGCATTTGAAGAAGCTTTGTTCAGTTAAAGGTCCTATTCATTCCCACTCAATATTCCCTTTAATAAAAAAAGCACGAAGAGAGTCAGTTAGTTGTCTGTTACCCTCCTCTCCTACTCTCCCTTGTTTGCGTGAACTCGATCTAAGATTCTGTAACTTAGTTAAAATCCCTGATGCCATTGGAAAGTTAAGTTGCTTAGAAAAGTTAAATTTGAAGGGAAACAATTTTGTTACATTGCCTAACCTCAAGGACCTTTTCAGACTGTATTATTTAAACTTACAGCACTGCAAGCGATTGAAATACTTGCCTGACCTCCCTTCACGAACTCACTTGCCCTTAAATCTTTACTCGTATCCGATGCAATATTTTGAAGGCTTCATCTATAAGGTGCCAAACGAAGATGAATGTATGGCTGGATTAATGATGTTCAACTGCCCAGAAATAGTTGAGAGGGAACGGTGCACTAGCATGACTTTTTCATGGATGCTACAAATGGTTCAGGTGTGCATGTTTCTTCCTTACACTTTCCTTCTTTTAATCTCTTTTGGTGTTGAAAAACAACTACTAACGCATAACAAAACTCAGTCATGGTACAACTCGGAATGTCTTACATCCCTTCCATCCCTCAAAAGTCTTGGAAGTATTATCCCTGGAAGTGAAATACCAATGTGGTTCAACAATGAGCTTGTGAGCATGGACAATTCAATAATCATAGATGTCTCTCCTTTTGTGTATGACAATAATTGGGTTGGTGTTGTGTGCTGTGCAATACTCAGTGAAGATCTTTACAGAACAAGAATTCTTGAGGATTCGAGAAGGGATCTATATGTGGAGCACTCAGATCATATGTGCCTATTTTATTACTCTCGTCAACAGTTCTGCCATGAACAAGGCATATTTCGGGGCAAACTTAATACACATGACTTGAGTTTGACATTTAGATTATATGACGTGGTAGTACTTTGTGCAAACATGAAGGATAGGGACGTGGGATTTTATGATTTTGAAGTGAAAAAATACGGGTATCGGTGGGTTAAAAAGCAGGATCTACAGTGA


Promoter Sequence:
>Vu_25680::LG6:25675249-25677249(-)
CAGTGAACGTAGATAGTCGAAATCACGAACTTGACAGAGAAAGAGAGACTTCGAATGGGGTCAGCGACGACGGAGATTGCTGAGCGTCGAGAGAGATTGTTAAACGTCGAGAGAGAAATGCACAAAATGGAGAGAGAGAATTTCAAATGGAACTCATGAAAACCCTAAAATTGAGAGAAGAGAGAAAGTGTTGAACGAAGAAGGGTGCTTTCGGAATAATGAAATCTGGAACCCTAATCCCTTTTTCAAATCAGATTTCTTAAAAAAAATTTTTCAAAATGGTCCAATACAACGCTGACACGTGTCGTTGTAAAAATGTTGTCAAATTTGCGTTGTTAACCTATCGTAATCCTAATGTAAAACATAGATTGTTGAATAAAAATCTGAAATGATAAATGTTGGAAGTTGAGACTTTTCAACTCTCCCTCAATATTCATACTAGCTTTTGTTAAAGAGTCATAAATGTGAACCTGACTAATAAAAGGCTATGTGAGAGAAGCTTCAAGGAAAAAAAGCAAAATCATAGATAGGCTGGAAATGAATCATACTAAATAGGATCCTGATATTTTAACAATAAATTTTAACAATTTTTTGATAATGGGCCACATGTCATTGCTTTATTGGTTTGTTTGAATTTGTTTTCAGAAAAATATTTGAAATCAACCCATCATAAATCACCGTATTGTCAAAAAAATTGTTAAAAAAAGAGTTGTTAAAAAAGAGTTGTTAAAAAAGACGTTTCCTACTAAATATATATACAAAAATAGAGTTGGAGTCTCCCACAAAGACTGGGTGGATTTATATGTCTTCAGTGTTTGCTTTCCACTTTCACAGTAATTCTCTCTCAACAACTTTACCTTTCAGTAATGTCTTCTAAGGCCATCGTCCAATACACCGCTTCTTCATCTCATGCAATTAACAGATACGATGTATTTGTGAGCTTCCGTGGTGAAGACACACGCAAGAACTTCACTGGTTTTCTCTTTCAAGCTCTCCGTAGAAAAGCCATCCATGCCTTCAAAGATGATCAAGATCTCAAAAAAGGTGAATCCATAGCACCCGAGCTCCTCCATGCCATTCAAACCTCTCGACTTTTCATTGTTGTCTTCTCAAAGAACTATGCTTCCTCCACCTGGTGCTTGCGTGAACTGGCAGAGATACGTAACTGCGTTCAAACTTCGCCAAGACCTGTTATTCCTGTCTTTTATGACGTTGATCCTTCGGTGGTGCGCAAACAAAGTGAATGTTATGAGAAAGCATTTGCAGAACACGAAAAGAGATTCAGAGAAGACAAAGCAAAGATGGAGGAAGCTGAGAGATGGAGAGAAGCTCTCACAGAAGTGGCCAATCTCTCTGGTTGGGATATTCGAAATAAGTTAGTAATCCTCTCTCGTTTCAAGATTGATCACAATTATATATTTATTATGCAGAGAGTTATATAACCCTTTCTATGTCCTGTTGTTTTCTGAAATATTCATTATCCCTTTCTATACTAGAGTTCAGAGATGTTAGGAATTTAGGAAAAGTAGAAAACAGTGGTTGATGTGTGTTAATGGTATGAGTTTGGGAGGAGGTTTAGCAATGTAAAGATAGCTTATAGAAGGTAATGTATTAATTCTTGAAAAGTTTTGGATGATAGAAGGTATCAATTTGATGACAAATCTAGCTTTATTGATATGTCAGCTGAATGAGTCAACCCGACAATGACTCACCCTAAAATGCATATACTCTTTTTTGCATTATATATTATTTTTCTCTATAAATGCATATACTCTTTTTTGTTCTATTGGGTGATTTTCCTTGATTGCATTTAAAATTTCAGGCCACAATATGTACAAATTGAAGAAATTGTTCAAAACGTAATAAATACTTTGGGTCCCAAAATTTGTAGTCTTCCAAAGGATGAACTAGTTGGGATAGAGCATAGACTAGAAGAACTAGTTGGGATAGAGGGTAGACTTCAATCAGTTAATAATGTTCGAGTTGTTGGAATCAGTGGG


Gene Sequence:
>Vu_25680(-)
ATGGGTGGTATAGGAAAGACTACACTTGCTCGAGCTTTATACGAAAGAATCTATCATCAATATGATTTTCATTGTTTTATTGATGATGTAAGCAAAATATATCGAGATTCAAGTTCATTAGGAGTACAAAAGCAGGTACTTTCTCAGTCTCTAAATGAGAAAAATCTAGAGATTTCAAATTCTTCTGAGGGAACATGTTTGATATGGTCTAGGCTGCACAATGTTAGGGCACTTGTAGTTCTGGACAATGTTGATGAAGTTGAACAACTAAGGATGTTTACAGGGAAGAGAGACATTTTGTTGCGTGAATGTTTAGTTGGAGGGAGTATAATCATCGTAGTTTCTAGGGATGAACATATATTGAGGACTCATGGAGTAGATGACATTTATCAAGTCCAGCCGTTGAATAACGAAAATGCTATGCAGCTGTTTTGTAGAAATGCTTTCAAAGTTAATGATATTTTGAGTGATTATGAAAAGTTGGCATGGGATGTACTATCTTATGCTGAGGGCCATCCCTTGGCAATTGAAGTAATTGGGTCATCTTTGTTTGGTCGAAATGTGTCACAATGGGAAAGTGCATTGGCAAGGCTAAAAGAAAAGAAAAGTAAAAATATTATGGATGTTTTGCGTATAAGTTTTGATCAGCTGGATGAAGAAGACAAAGAAATATTTTTGGATATTGCATGTGCCCTATGCCATTATGATGAGGAATATGTGAAGGAAGTTCTAAACTTTCGTGGATTTCATCCTGAATATGGTCTACAAGTTCTGCATGACAAATCACTAATATTAAAAGAGGATAGGTGTATTTATATGCACAACTTGTTGATGGACTTGGGTAGGTATATTGTCAAAGAAGAATCTCCTAAGGAACCCCTAAAGAGGAGTAGGTTGTGGGATTACCAAGATTTTGCCAAAGCTATGTCAAACAATCAGGTAAAATTAATTGATTCAATTATAATTTTATGTTGCCATTTTTTTAGAGTATGAAAATCCTTCGAAAAATATAAAAATTTTATTTCTTTGTACGTAGACAACTGAAATTCTTGAAGTCGTAGCTGTTAATTCATTTGCAAGTTCTAAAACTGTGAGGGTAGATGGTCTATCGAAAATTAGACAACTTAAGTTTCTTAGACTTGGGAACATGAACTGTTCAGGAAGTCTCAGTCATCTTTCAAGTGAACTAGGATATCTTATTTGGCACAATTATCCTTTTGAGTGTTTGCCTCAAAGTTTTCAGCCACACAAACTAGTTATGTTAAAATTGAGAGGAAGCAGTATTCAACGACTATGGAGTGGCACAAAGGTGATGTATATTAAATTTATATTTCTAAAAAAAAAATTAAAGAAAACCTAAGCGTCATTATTAATTTGGCTCTTGCTTTTGCTAATCGTTGTAGGTGCTACCTAATTTGAAGCTTTTGGATCTCTCTGACTCCGAAGAATTAGTTGAGATGCCCGATGTTGCAGAGGCCCTAAATCTTAAAGAAATAGTTCTTGAAGGATGCATACGGCTCCGAAAACTTAGTCCATCGATTGGTCTTCTGAGCAAGCTTACTATTTTGAATTTGAAAAACTGTGAAAACTTAGTAAGCTTACCTAATAGCATATTGGGCCTGAATTCTCTTGAATATCTGACTGTCTATGGTTGTTCAAATCTGTTTAATGAGTTATTAGATGAAGCAAGTAACACAGAGCATTTGAAGAAGCTTTGTTCAGTTAAAGGTCCTATTCATTCCCACTCAATATTCCCTTTAATAAAAAAAGCACGAAGAGAGTCAGTTAGTTGTCTGTTACCCTCCTCTCCTACTCTCCCTTGTTTGCGTGAACTCGATCTAAGATTCTGTAACTTAGTTAAAATCCCTGATGCCATTGGAAAGTTAAGTTGCTTAGAAAAGTTAAATTTGAAGGGAAACAATTTTGTTACATTGCCTAACCTCAAGGACCTTTTCAGACTGTATTATTTAAACTTACAGCACTGCAAGCGATTGAAATACTTGCCTGACCTCCCTTCACGAACTCACTTGCCCTTAAATCTTTACTCGTATCCGATGCAATATTTTGAAGGCTTCATCTATAAGGTGCCAAACGAAGATGAATGTATGGCTGGATTAATGATGTTCAACTGCCCAGAAATAGTTGAGAGGGAACGGTGCACTAGCATGACTTTTTCATGGATGCTACAAATGGTTCAGGTGTGCATGTTTCTTCCTTACACTTTCCTTCTTTTAATCTCTTTTGGTGTTGAAAAACAACTACTAACGCATAACAAAACTCAGTCATGGTACAACTCGGAATGTCTTACATCCCTTCCATCCCTCAAAAGTCTTGGAAGTATTATCCCTGGAAGTGAAATACCAATGTGGTTCAACAATGAGCTTGTGAGCATGGACAATTCAATAATCATAGATGTCTCTCCTTTTGTGTATGACAATAATTGGGTTGGTGTTGTGTGCTGTGCAATACTCAGTGAAGATCTTTACAGAACAAGAATTCTTGAGGATTCGAGAAGGGATCTATATGTGGAGCACTCAGATCATATGTGCCTATTTTATTACTCTCGTCAACAGTTCTGCCATGAACAAGGCATATTTCGGGGCAAACTTAATACACATGACTTGAGTTTGACATTTAGATTATATGACGTGGTAGTACTTTGTGCAAACATGAAGGATAGGGACGTGGGATTTTATGATTTTGAAGTGAAAAAATACGGGTATCGGTGGGTTAAAAAGCAGGATCTACAGTGA