Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25676 LG6 25622512 25627141 hypothetical protein TSUD_61020
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 25622684 missense_variant p.Gly535Val
A/G 25622707 downstream_gene_variant
A/G 25622721 downstream_gene_variant
A/G 25622724 downstream_gene_variant
C/A 25622726 downstream_gene_variant
G/A 25622775 downstream_gene_variant
G/A 25622812 downstream_gene_variant
G/A 25622814 downstream_gene_variant
A/G 25622836 downstream_gene_variant
T/A 25622840 downstream_gene_variant
C/G 25622843 downstream_gene_variant
G/T 25622848 downstream_gene_variant
A/T 25622860 downstream_gene_variant
T/A 25622886 downstream_gene_variant
T/A 25622889 downstream_gene_variant
A/G 25622906 downstream_gene_variant
T/A 25622912 downstream_gene_variant
G/T 25622945 downstream_gene_variant
A/C 25622947 downstream_gene_variant
G/A 25622948 downstream_gene_variant
A/C 25622952 downstream_gene_variant
A/T 25622956 downstream_gene_variant
T/C 25622962 downstream_gene_variant
T/G 25623030 downstream_gene_variant
C/A 25623048 downstream_gene_variant
A/C 25623061 downstream_gene_variant
A/G 25623168 downstream_gene_variant
G/A 25623177 downstream_gene_variant
T/C 25623251 missense_variant p.Asn519Ser
G/T 25623253 missense_variant p.His518Gln
A/G 25623314 missense_variant p.Met498Thr
T/A 25623358 synonymous_variant p.Pro483Pro
G/T 25623475 synonymous_variant p.Ala444Ala
G/C 25623476 missense_variant p.Ala444Gly
G/A 25623502 synonymous_variant p.Gly435Gly
C/A 25623609 stop_gained p.Gly400*
G/T 25623617 missense_variant p.Pro397His
C/A 25623838 downstream_gene_variant
C/T 25623849 downstream_gene_variant
T/C 25623930 downstream_gene_variant
A/C 25623998 downstream_gene_variant
T/C 25624044 downstream_gene_variant
A/G 25624097 missense_variant p.Tyr379His
G/C 25624210 downstream_gene_variant
T/A 25624211 downstream_gene_variant
A/T 25624213 downstream_gene_variant
A/G 25624219 downstream_gene_variant
T/C 25624229 intron_variant
A/T 25624233 intron_variant
T/A 25624236 intron_variant
G/C 25624285 intron_variant
A/G 25624514 intron_variant
A/G 25624559 intron_variant
C/A 25624586 intron_variant
A/T 25624932 intron_variant
C/T 25625078 intron_variant
C/A 25625114 intron_variant
T/A 25625268 intron_variant
G/A 25625309 intron_variant
C/T 25625472 missense_variant p.Ala276Thr
G/T 25625639 intron_variant
C/T 25625714 intron_variant
A/T 25625741 intron_variant
C/A 25625781 intron_variant
G/T 25625850 intron_variant
T/C 25626004 intron_variant
C/T 25626057 intron_variant
A/T 25626058 intron_variant
C/T 25626234 synonymous_variant p.Glu217Glu
C/A 25626322 missense_variant p.Arg188Met
C/G 25626479 intron_variant
C/A 25626480 intron_variant
A/G 25626704 intron_variant
T/C 25626932 synonymous_variant p.Ser70Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25676.1
MGCLCSKSAAVEDSKVGVTKKLQSYSTRPSELNVLRLNSTRRVDEGGAKDVITDSGHVKGSLIDKKANGSGQLYVDHDGKKKTEKPEVTVVDHIGPGRIPKAIEGEQVAAGWPAWLSSVAGEAIKGWIPRRANNFEKLDKIGQGTYSTVYKARDVINRKFVALKKVRFDNLDPESVKFMAREIHVLRRLDHPNIIKLEGLVTSHMSRSLYLVFEYMEHDLTGLASNPEIKFSEAQVEQLHRIFKLCGSPSDEYWLKLRLSHSTVFRPPHHYRRCVAETFKDYPSTAVKLIETLLSVEPAQRGTAAAALKSEFFTSEPVPCDPSSLPKYAPSKEIDAKLRDEARRQGAGGGRDQKVALGVRQEKGHRTSVTVKDNADPAVSVQQGRYSSSKNRSELYNPHRGAVSGILVFPHKQSEDVKAMENSFSGHIYKKPSHSGPLVPGSVWAKGAKEVDDVPPTSIRGNLSKLSGLVASRTLLPEDQQDKPVHLHHRKPSEVRKSMESTTGSESRRRQEQKRIVDHNQIESRRVPTEKSTPGGRESMGNNKIYLSGPLMVSSSNMDQMLKEHDRKIQEFSRRARIDKSRGEKVRAQRKW*


CDS Sequence:
>Vu_25676.1
ATGGGTTGCTTATGCTCTAAGAGTGCAGCTGTAGAGGACAGCAAGGTAGGAGTCACTAAGAAATTGCAATCGTATAGCACAAGGCCTTCAGAGTTGAATGTTTTGCGGTTGAATTCGACTAGGAGGGTTGATGAAGGTGGGGCTAAAGATGTGATAACAGACAGTGGTCATGTAAAAGGTTCATTGATTGACAAGAAGGCCAATGGTTCAGGGCAGTTGTATGTTGATCATGATGGGAAGAAGAAAACAGAGAAGCCTGAAGTGACTGTTGTGGATCATATTGGCCCTGGAAGAATTCCAAAGGCTATAGAAGGAGAGCAAGTTGCAGCTGGATGGCCAGCATGGCTTTCTTCTGTTGCTGGTGAAGCTATTAAGGGATGGATACCTCGGAGAGCGAATAATTTTGAGAAGTTGGACAAAATTGGACAAGGAACTTATAGTACTGTTTATAAGGCAAGGGATGTGATTAACCGCAAGTTTGTTGCATTGAAAAAAGTACGCTTTGACAATCTTGATCCTGAGAGTGTGAAGTTTATGGCAAGGGAAATCCATGTTCTGCGTAGGCTTGACCATCCAAACATTATAAAATTGGAGGGCTTGGTAACGTCTCATATGTCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAGCACGATCTTACAGGACTTGCATCAAATCCTGAAATCAAGTTCTCTGAAGCACAGGTTGAGCAATTGCATCGAATTTTTAAACTTTGCGGCTCACCATCTGATGAGTATTGGCTTAAATTGCGGCTGTCACATTCAACAGTATTCCGGCCACCACACCATTATAGACGATGTGTTGCTGAGACATTTAAGGACTACCCATCTACTGCTGTAAAGCTTATAGAGACCCTGCTTTCAGTAGAGCCGGCACAACGAGGAACTGCAGCAGCTGCTCTGAAAAGTGAGTTCTTTACATCAGAGCCTGTGCCTTGTGATCCATCAAGTTTACCAAAATATGCTCCCAGCAAGGAAATTGATGCTAAGTTACGAGATGAAGCCAGAAGGCAAGGAGCTGGTGGAGGTAGGGACCAAAAAGTTGCCTTGGGAGTTAGACAAGAAAAAGGGCATAGGACTAGTGTCACAGTAAAAGACAATGCCGACCCAGCTGTATCAGTACAGCAAGGACGTTATTCCAGTTCAAAGAACCGAAGTGAATTATACAACCCTCATAGGGGAGCAGTGTCTGGGATTCTTGTTTTCCCTCACAAACAGTCAGAAGATGTTAAAGCAATGGAAAATAGTTTCTCTGGGCATATATATAAGAAGCCATCACATTCAGGCCCATTGGTTCCTGGTTCTGTTTGGGCCAAAGGTGCAAAGGAAGTTGATGATGTACCTCCTACTTCAATCAGAGGGAATCTATCAAAACTATCTGGGCTAGTGGCATCTAGGACATTGCTGCCAGAAGATCAGCAGGACAAACCAGTTCACTTGCACCACAGAAAACCAAGTGAAGTAAGAAAATCAATGGAGTCAACTACTGGATCAGAGTCCAGAAGAAGACAGGAACAAAAACGGATTGTTGATCACAATCAAATCGAAAGCAGAAGGGTCCCCACCGAAAAATCAACCCCGGGTGGGAGGGAGTCGATGGGAAACAACAAGATATACCTCTCAGGACCATTAATGGTGTCATCAAGCAACATGGATCAGATGCTGAAAGAGCATGATCGAAAGATCCAAGAGTTTTCAAGACGAGCAAGAATTGATAAGTCAAGAGGTGAGAAAGTTCGTGCACAGCGGAAGTGGTGA


Promoter Sequence:
>Vu_25676::LG6:25627141-25629141(-)
GTTTTAATGATTAAAAATAAAAATTTAATTACTTAAACTTTACAATGAAGTTGTTTTAATAAATTAAAATAATTTTTAATTGATTAAAATTATTTAAAATTCAAACTTCATTCGATTTTAACATATTAAAATCTTGTTTTAATATACTAAAATTCTAAAGTATTGGCTTGTAACTTTGTTTTAGTGAATTAAAATAATTTTAGTTTATTAAAACCATAAATATAAAAAACACGCATATATCTATGAATAATTAATAAAATATAACTACTTCAAATTTGGTCAATGACCACTTAAATGAAAAGTGATTACTCCAAACCTCCATGGCTTAACAATTTGACTCATATTAACAGTCACATTCACTATAAATTCAATATCTACATAAAATTTCAACTTCAACTGAAATAAAATGATTTATCAGTGTCACTTCCAAGTTATAAGAATTCTAGTGTAGAAAAAGTCTGAAATTACATAAAAGTCTCAAATACTTAGAAAACCTTCAAAATACTAAAATATCATAAAAATCAAAGATTAATCTTGTTGTAACATCATTTCCTCATTTCATAAAACTTGTGAGAATTTAAAGTATACATAATTCTATAAAATACTGGGAAATGGTTTGTGAAAGAGAATTGAACTTGCTCTATCAAAGATTTTTGATGGATGAAAAATGACAACAGATTTATTATTTTTTTACTCATGTTAGGTGATAAAAATAATAATAACTAGTTCCAAAAAGTTAGAGAAACATTAAAAAGTGTTTAAATAAAAATATTTTTACAGAATATATAATTAAATAGCTAAAGTGATAATTTATATTTTAAAAAATCTAGAATTTTAACATTTATTCACCTTTTTCTTAAAATTATATTAAACTAAAACCTGTTATTCAATTAATCTTTTTTTATCTTAATTTGTAAGGTATTTTTAGGAACTATTTGTAACGTTTGTTTACTGTAGGAAGTTCTTAAATCGATTCTTAAACTCTTGACTAAGAAATACCAAATTGATACTGATGAAGGAGGAATGCCTTTAATTTTAAAAAATCCAAGGACACTATTACCCTGCACTATGAAAAAAAGGGGGAAAGTAATAAAAAATTGGAGAGAATTAAAAACGCGTTTAATGCAGAGCATTGATATTCCAAACAGAACTCAACGACCAAAACAGAGGTTTTGAACACAAAACTAACACCAATGGTATTTTTGACAGAAGAAACGTGGTGGAGGGAGAGAAAGTCACAACACTGTATGGAATCATGCATCACTAGAGAATATAGATAGATAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAAGGGAAAGTGTGTGTGTGTGTGTGAGAAAGAGAGAAAGTGGAGTCTTTTGACTGAGCCTAGCCGGCAAAAGCCGTCTAAGGTTGTTGTCTGGTTGATGATAATGTTCTTTTTAATGTCTGAATACGCGTTGAACTTTCAGACATACCCCCCACCACACTTTTTTCTTGTTAAGCCTCTGATCCATTTTTACCCTTAATCCCAATCCAAAGGTCCACCTTGTCTTTTTCCTTCATTAATTGATTCCATTGTTTGTAAATCATAATACTCTGAGTGTTATAACCTTCATTCATCTCAGACTTTTTTTTATTGCTTAGATTTCTTCTTTTATTATTGAACAATGATTACTTTATGACAGTTAGTGATTGTTGTTGGAGGGTTATGAATTGTGGGTTTGATTCAAGCTCAGAGCTTTTGAATTGGGTGGGGGTGGAATATTTCAGTGGTGTATTTTTGGTATCTGATTTTGAATTGGGTTTGCGTCGATGAAGGAAAGTTTTCGTCTTTACTTTTGAATAGCGAGAAAAGAAGGTACTGTGTAGTGGGTGACTTAATTTTTATGAGTTTTGGTGGAGTTGTTGGAAGAAGTGGTGCTGGTGGATGGCGATCCTACTTTTTGAAGGATAATAATTTTGTGAAGTTGATGTGATATCGTTGTGCTTCAAC


Gene Sequence:
>Vu_25676(-)
ATGGGTTGCTTATGCTCTAAGAGTGCAGCTGTAGAGGACAGCAAGGTAGGAGTCACTAAGAAATTGCAATCGTATAGCACAAGGCCTTCAGAGTTGAATGTTTTGCGGTTGAATTCGACTAGGAGGGTTGATGAAGGTGGGGCTAAAGATGTGATAACAGACAGTGGTCATGTAAAAGGTTCATTGATTGACAAGAAGGCCAATGGTTCAGGGCAGTTGTATGTTGATCATGATGGGAAGAAGAAAACAGAGAAGCCTGAAGTGACTGTTGTGGATCATATTGGCCCTGGAAGAATTCCAAAGGCTATAGAAGGAGAGCAAGTTGCAGCTGGATGGCCAGCATGGCTTTCTTCTGTTGCTGGTGAAGCTATTAAGGGATGGATACCTCGGAGAGCGAATAATTTTGAGAAGTTGGACAAAGTAAGTGGTCTTGTCTGTTGTCTGTGTTTACATTATGATTAAACTGTTCTGTAATTCTTACTGTCTTCTGTCTTAAGATGCTGCATCAATCTGTTTGTTAATGGTTTGGAGTTCAAGATGGGGTTAATTTCATATTTTTTGTTGTAATGAAAAAAGAATGACTGGTAGACTGGTTTGATTTTGTTGTTGTTTGTTCTTGAGTATAAACTTCTTATATTGGTGAAGGAATAATATGATGATGGGATTCTATTATGCAGATTGGACAAGGAACTTATAGTACTGTTTATAAGGCAAGGGATGTGATTAACCGCAAGTTTGTTGCATTGAAAAAAGTACGCTTTGACAATCTTGATCCTGAGAGTGTGAAGTTTATGGCAAGGGAAATCCATGTTCTGCGTAGGCTTGACCATCCAAACATTATAAAATTGGAGGGCTTGGTAACGTCTCATATGTCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAGCACGATCTTACAGGACTTGCATCAAATCCTGAAATCAAGTTCTCTGAAGCACAGGTAATAATCGTTTGTTTTCATTTACTCAACGTATTTTTAAAAAGTTCAGATTTTTTTGCATGTACATGTCTGGTATAAGACTACAAGTATAGAAAAGTAGCTATGTATGTAACATGTTTTTTGTTTAAAAACTCCTAAAACAACAATATTCTTTATATGTCAGCTAAAATGCTACATGCAGCAACTTCTTAGTGGATTGGATCATTGTCATAGTCATGGTGTGCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGAATCTTAAAAATAGCTGATTTTGGTTTGGCAAGTTTTTTTGACCCCCACCACAGTGTTCCATTGACAAGCCGAGTAGTAACTCTATGGTATAGACCACCAGAACTTTTACTTGGAGCAAATCATTATGGGGTTGCAGTGGATTTGTGGAGCACTGGTTGCATACTGGGTGAACTATATACTGGAAGGCCCATTTTGCCAGGAAAAACAGAGGTATGAGTATATATATATATATATATATATATATATATATATATAAGTGCAGTTTCCATCATTTTTCTTGTATTGTTGTTATTCTAGGATCTTTATTTCTTTGTAGGTTGAGCAATTGCATCGAATTTTTAAACTTTGCGGCTCACCATCTGATGAGTATTGGCTTAAATTGCGGCTGTCACATTCAACAGTATTCCGGCCACCACACCATTATAGACGATGTGTTGCTGAGACATTTAAGGACTACCCATCTACTGCTGTAAAGCTTATAGAGACCCTGCTTTCAGTAGAGCCGGCACAACGAGGAACTGCAGCAGCTGCTCTGAAAAGTGAGGTAAGCTGGTTTTTATCTCCAGCAAGCAGTTATAGCATTCAAGGAAAATTTGTATCGTTGTTTAATGAAGCTCTTCGTGTTGCTTGCTTCTATGACATCACTTAGATGCACACAAAAGTGTGATTAATGCTTCTCATTCGGACTTACAGATCAAAGTTTATCTAATCGCATATCTCGTAAATCTCTCTTGTGATTCATTCTCATTTAGATTCTGATATATATGTGGAAGAATATGTGATCAGACAAATAGGAATTTCCTGACATTGGAAATATCCAAATTGCAAACGTTTGATATATCAGTGATGTGTCAACGCTCAATACTAGTTCTTAGTTTTAAATATTTTTGTCCATTATCACCTGCTAAAATGAGTTAAATTTAATGTTGTACTTCTTTTACTCTTTAACATTCATGCTACTGTAGATTTGTTCCTTTTCTTTTTCCTTTTCCTTTATGTGCCTTGAAGAGAATCTTCTCACCATTCAATACAGGGGAATCAGGAAGTCAGATTCAAATAGACAAATCAAGATATATTTTTGTTACTGTACTGCTATGTTATGAAGTTGTAAAAATAATCCAAATTCTTGCACAACTCTGTCCAACATATTTTATGAACCTTTTCTTTTTCTTTCTAACCTGCTTGATTCTCCATTTTTTGGCAGTTCTTTACATCAGAGCCTGTGCCTTGTGATCCATCAAGTTTACCAAAATATGCTCCCAGCAAGGAAATTGATGCTAAGTTACGAGATGAAGCCAGAAGGTACTGTATAGGTTAACTGTGTTTATTTTGAGGCCAAAACAATTATATGTAATTTTAGTAATTAACATTGTGATGGAGGCTTCAGTCTCTGGTATGGAAATTTTTGCTTGGAATGTAAATTATATATGGCTTAATCTGAATAATTTCAGTGTGAATCAAATTGGTCTCTTTTGAATGTTGACATCTCTGCCATGAAAATAATCAATAATGGGGGTTTCTTGTGTACTTCCAGGAAAATAATTTTTCATATTATTGGTGATTGAAGCCTTGAACACATAGTTACGTTTACCTTTATTTGTTTCATCACAACTGTTAGCCGTGCTTTCTGCATGACTTGATTCATACATTTGCACTATTGCTTATAAATGATAAGTAATATGTATTCATTTTTGTTTACTGTCTTAGGCAAGGAGCTGGTGGAGGTAGGGACCAAAAAGTTGCCTTGGGAGTTAGACAAGAAAAAGGGCATAGGACTAGTGTCACAGTAAAAGACAATGCCGACCCAGCTGTATCAGTACAGGTACTCTGAAAAGTTTTAAATTTTATTGTATGACTTGCCTCTATGATATTATGAGAATGTGTCAGGACACCAAAACCTTTTTTGGGTTTTTGCAAGTTTGCAACTTGCACTGACATTTTAGTCTTACTGTAACCTCTGTTTATTTATGAGGCTAAGATGAGAATACTTGGGTTTGAATCAGGCTGGGGTATAAGTGAATTTCTAGTTCTAAAACTAAAAGAAAAGATTTGTGAGCTTGGTGCCTATTGGTTATTTCATAAATAACTTTTTATTGAACAGTATAAAAGCCTTAATATACTGAAACCAAATCTTATATACTAAATTTCTAAGTATTCTTGTGCTCTTCTCACATGTTACCTCCACTGTCCTATTCTCTTTTTAACTTTTCTTCCACTAGGCTTATCTTACTGTTGTCTGATGCAGCAAGGACGTTATTCCAGTTCAAAGAACCGAAGTGAATTATACAACCCTCATAGGGGAGCAGTGTCTGGGATTCTTGTTTTCCCTCACAAACAGTCAGAAGATGTTAAAGCAATGGAAAATAGTTTCTCTGGGCATATATATAAGAAGCCATCACATTCAGGCCCATTGGTTCCTGGTTCTGTTTGGGCCAAAGGTGCAAAGGAAGTTGATGATGTACCTCCTACTTCAATCAGAGGGAATCTATCAAAACTATCTGGGCTAGTGGCATCTAGGACATTGCTGCCAGAAGATCAGCAGGACAAACCAGTTCACTTGCACCACAGAAAACCAAGTGAAGTAAGAAAATCAATGGAGTCAACTACTGGATCAGAGTCCAGAAGAAGACAGGAACAAAAACGGATTGTTGATCACAATCAAATCGAAAGCAGAAGGGTCCCCACCGAAAAATCAACCCCGGTTAGTTATTATTGTTATATATTTTTTTCACTTTGGTAATTATTAAATATTTGGTAGTGGAAATCTTCACTTGATTTGGATTCTCTCATGTTACATGATCATTCTATTGGAGGTAGATAAACACAAGTTTCATTACATAAGGACTATAGTGTTCCTCTTGATGTGTTATAAAGTGTAATCGTTATATTCAAATCAGCATTCAGTAAACTGTTTGATAATAACCTTAGGAGAATCACACCACAAAAACTAGCTGTATTAGCTGCAGAGCTTAAGACTGAAGTTCCATACTTTTCAAACGGATTCTAACATTGTCACACTATTATTCTATAAAATTTTGGTCTTCTTTTTATGAAATGCTCCAGTTGCCATGTTCCCTAGTAGTTGAATGTAACACTCACAGATGATAGGCCACTAATTATAGTAAATGGAGTCCAAGTACTGTGGCAACAATGAATGAATATTTGACCACTATTGCAACAGTGTTTTTAGTTGAAAATTGATGTGGGGACACTGTTTCAGGGTGGGAGGGAGTCGATGGGAAACAACAAGATATACCTCTCAGGACCATTAATGGTGTCATCAAGCAACATGGATCAGATGCTGAAAGAGCATGATCGAAAGATCCAAGAGTTTTCAAGACGAGCAAGAATTGATAAGTCAAGAGGTGAGAAAGTTCGTGCACAGCGGAAGTGGTGA