Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25673 LG6 25556876 25557849 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 25556900 synonymous_variant p.Gly200Gly
C/T 25556921 synonymous_variant p.Glu193Glu
T/C 25557029 upstream_gene_variant
A/T 25557036 upstream_gene_variant
T/C 25557106 upstream_gene_variant
C/A 25557132 upstream_gene_variant
A/C 25557190 missense_variant p.Leu148Arg
T/C 25557199 missense_variant p.Asn145Ser
A/C 25557213 missense_variant p.Asp140Glu
C/A 25557234 missense_variant p.Met133Ile
G/T 25557263 missense_variant p.Gln124Lys
C/T 25557294 synonymous_variant p.Leu113Leu
A/G 25557330 synonymous_variant p.Ser101Ser
G/A 25557351 synonymous_variant p.Ala94Ala
G/A 25557372 synonymous_variant p.Asn87Asn
C/T 25557399 synonymous_variant p.Lys78Lys
C/A 25557404 missense_variant p.Ala77Ser
T/G 25557410 missense_variant p.Lys75Gln
C/A 25557437 missense_variant p.Val66Leu
T/C 25557509 splice_region_variant&intron_variant
T/C 25557636 intron_variant
A/G 25557695 intron_variant
C/T 25557699 intron_variant
T/C 25557729 missense_variant p.Asn41Asp
T/A 25557783 stop_gained p.Arg23*

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25673.1
MDHLGIQPPSTKVERRLVEKNRRNQMKILFNKLNSLLPSYNPKEVLPLPDQVDEAINYIKSLEAKVKMAQEKKEKGAKKRYRGCFSNNNGANLAAAPLPKSPQLEIQEVGSSLQVVLTTGMDNQFIFYEIIRMLHEENIDVRSLNSSLTGDSVLHVVHAEIPQSFLQFGAAKVSERLKRFVNGSYSDVETQHEWWDFDIGTDDIWGF*


CDS Sequence:
>Vu_25673.1
ATGGATCATCTTGGAATTCAACCCCCTTCAACCAAGGTTGAAAGAAGGCTCGTTGAGAAGAACAGAAGAAACCAGATGAAGATCCTCTTCAACAAACTCAATTCTCTTCTCCCTAGCTACAACCCCAAGGAAGTATTACCACTGCCTGATCAAGTGGATGAGGCAATCAACTACATCAAGAGTTTGGAGGCGAAGGTGAAGATGGCACAAGAGAAGAAAGAGAAGGGTGCTAAGAAAAGATACCGTGGTTGCTTCTCCAACAATAACGGTGCTAATTTAGCCGCAGCACCACTCCCAAAATCTCCACAACTTGAGATTCAAGAAGTGGGTTCCTCCCTGCAAGTTGTTCTGACTACAGGGATGGATAACCAGTTCATATTCTATGAAATCATTCGAATGCTGCATGAAGAGAACATAGATGTTAGAAGTCTCAATTCCTCACTCACTGGAGACTCGGTGCTTCATGTTGTGCATGCTGAGATTCCTCAATCTTTTCTTCAATTCGGAGCCGCCAAAGTAAGTGAGAGGTTGAAAAGGTTTGTAAATGGATCATACAGTGACGTGGAAACACAACACGAGTGGTGGGATTTTGATATTGGCACTGATGATATCTGGGGTTTCTAG


Promoter Sequence:
>Vu_25673::LG6:25557849-25559849(-)
GAAGGAACATACATACCAGAAATCAATTATGAAATACTAATAAAGTTTGACCTGTTAGGATTATTCCTGGCAAGACGAGAGACTTTTTGGTCTTAACCACTTCTGTATATAAATTTCAGAAAATCAGTATTCTGCTTTTGCTGGGACCCACGATCAGAAACTATATATAATAACAACTATTTTCCTTTAAAATATTTTTCACATCTTAATTTTTTAGCATGAAAAAAGAGTCATACAAGTTGAGTCCTATTGGGTCTTTCCGATAGATAAAACGTTTCCTGTTAGTTGCCTCTCTTTTTCAGAGTCCACTCCTCCTTTTCTTCAACATATAAATATTTGGATATTTTCCACTACTTAATTATAACGCAATTTAAGATATAATATATCATCTTTTTTATTTCAAATTAAAAACTCAGATAAAATTTATGTATAATTAAGTAATAATAGAATGAAAGTTAAACTTTACATAAAATAGGAGTTGCAAAACCACTTAAACTTTTCACGTTTAAAATAAGTTAGTTAATATCAACTGCCAAACTAATCTATTCTTAAAAAAAAAATACATTTTTACATGTTACATTTTTAATTGCTCGAAGACCTAATTAAATAAATGATAATTCAATGTTTCATTATATTTATTTTTTGTGAAGGAGCAGAAATATGAACTTGACTATGAGAAAACCTTGTTGTATACTTATCAAACAATAATCATAAACAAAAAATATTTCAATACAATTTTATAATAATATTTAAGATATTATTTTTTCAATAATTTATTATTTTTTTATTATATTGACGTATTCTAAATTTAAAATGAAAAAATGATAGGTATATTGTGTTAAAATGTTAGTCATAATTAACTCATTCTTAGTTAAGTTGCCGTTTTATTCTTTTATATTAACTTATATATTTTCAGATTTTTCTGTTTAATAAGTCATGTTCTTCTCACATAAAACATAGAAGTTTACAAGATAAAGTCTATATAAAGACTAGAAGTCACAATGACACGTAAACTTATTTTACTTTTAATTTTTCAAAATAAGTTGAGATAAAATGGTCCATTCTAGTTAAGTTGAATTGGTAAACTAATCATTTTTTAAAAAAAATAATACAACTTTAGTTTTAAATTTTATATAGAAATTTTATTAGTCCTTAATTTGTTAATTAACATTTTTAATTATAAGAAAGAAGAAACAATTACTTTTATAAATTAAATTATTCAATTACAACAAGTAATTACAATTTAATTAAGGTGCTGATACCTTAAATTATAATGTTATTTTTTACCGCTTTTACCAATACAAATTTATAATCCTTTAAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAATATAATATATTTAAAATAATACTGAAATGATAAGCGCGACATCCTAATAAAGAGAGTAGGGAAAATTGCGGTAACCCATTTGTTTTTTTTTTTTCACTCTATCTACTTTTCAATTAGTTTTTACGAAATTTAAAGCATCTTTAATTACTTTTTGTACAAAATTTAAAGCATTATTTAATTAATTTTTTGAACATCTAGAAGATAAAATTAATAAAAAGTTAAAATATATATTAGACAAAGGCATCACTGTAATAGAAAAGAATTGGGAATGTATTTTGTTAGTGTTACGCGGAAACGCAGACCATTGAAGTGAGAAAGAAACAAGGAAAGTGCATAATAAAGACACGTGTATATTTGGACGGCAGAGCAAAACAAAATGACTCAGCACATGGCAGGCTCAAGAACATTACATCACGAAGTGACGTTTCTGATCTCTAACAATTCCATTCCTTCCATACAACATTTAAATCTCATACCATTTCTTTCACTATTCTAAGTATAACCACTTCACGTATATATACCCACATCAGCACACCACTCCATTCATCTTCCTATCTTCTAATAAACTCACAGGTTGCTGCAGAATTCAACTGCATAATAA


Gene Sequence:
>Vu_25673(-)
ATGGATCATCTTGGAATTCAACCCCCTTCAACCAAGGTTGAAAGAAGGCTCGTTGAGAAGAACAGAAGAAACCAGATGAAGATCCTCTTCAACAAACTCAATTCTCTTCTCCCTAGCTACAACCCCAAGGTTATAAAGCTTCCTTCTTTTGTTTTCTTACCAACTTTTTTCTTGCATGGAGATTATAAATTTAGATGGGTGGCCATAGTTTACAAAAGTTACCGTAAAATGTGTTTACACTGCTATCTGATCACCAGTTGTTCGTATAATTGCTTTGTTAGTACTGATTGGTGTGTTTGGAATTTGAATGGTGTTATTGATTTGGTTTTTGATGGTGATGACGCAGGAAGTATTACCACTGCCTGATCAAGTGGATGAGGCAATCAACTACATCAAGAGTTTGGAGGCGAAGGTGAAGATGGCACAAGAGAAGAAAGAGAAGGGTGCTAAGAAAAGATACCGTGGTTGCTTCTCCAACAATAACGGTGCTAATTTAGCCGCAGCACCACTCCCAAAATCTCCACAACTTGAGATTCAAGAAGTGGGTTCCTCCCTGCAAGTTGTTCTGACTACAGGGATGGATAACCAGTTCATATTCTATGAAATCATTCGAATGCTGCATGAAGAGAACATAGATGTTAGAAGTCTCAATTCCTCACTCACTGGAGACTCGGTGCTTCATGTTGTGCATGCTGAGGTATGTATATATGTGTCATCGTCTGTTGTTGTTTAATGTTGTTTTCATATTAATTCATTGTTTGATGTGTTCTTCTTAACATACAGTCATACCTTATTCCTCTAATTTTGAAAAACTTGATGGATTTATGCAGATTCCTCAATCTTTTCTTCAATTCGGAGCCGCCAAAGTAAGTGAGAGGTTGAAAAGGTTTGTAAATGGATCATACAGTGACGTGGAAACACAACACGAGTGGTGGGATTTTGATATTGGCACTGATGATATCTGGGGTTTCTAG